BAC Information

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BAC

Clone NameB6Ng01-123B06
Chromosome4 (Build37)
Map Location 25,838,317 - 25,838,932
singlet/doubletsinglet
Overlap genenone
Upstream geneC230012O17Rik, Gpr63, Fhl5, 1810074P20Rik, Prdx6-rs2, LOC665019, LOC625732, Fut9, LOC100040780, Hn1-ps1
Downstream geneManea, Bhmt-ps1, LOC665079, Gng2-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-123B06.bB6Ng01-123B06.g
ACCDH926343DH926344
length6161,162
definitionDH926343|Mus musculus domesticus DNA, BAC clone: B6Ng01-123B06, 5' end.DH926344|Mus musculus domesticus DNA, BAC clone: B6Ng01-123B06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctcctatctctcacttagaatacacaggctacatacaccaaca
catatggttgttgagggaaacctacatccatgccagctaacaagctactc
tatatttgcctttagctctatgtatctgcactcaaggcttcactttcaaa
tttctaaatttccaaggtacaaactagcaattatctgcttaatttctttt
atcactagttaccaccacaacccatattttattttatttttacataatat
ttttattgattatttaggaatttcatatcatgatttctgggcacactcac
tttcttgtcctcccaggtctgcccctacacccttgtgaccgccacactgg
aaaaacaaaaacaaaacaaaacaaaaaaagaaaaagaaaaacagctcatt
tttgttgttgttgttgcccatatgctcactggagcatgatcaaagtcttg
gtgtccagttccttaaagaaaactgagtccttctttactcttatgcctac
cagaagccatcactcatgaagaactatacttcagcatctgtaacacaatg
ttcagtgttctctttgatggattttaaattaatctgttacttttttttgg
gggggggggtgaagcg
gaattctcacctgaggaataccgaatggctgagaagcacctgaaaaaatg
ttcagcatcctcaatcatcagggaaatgcaaatcaacacagccctgacat
tccacttcacaccagtcagaatggctaagatcaaaatttcaggtgacagc
agatgctggctaggatgtggagaaagaggaacacttctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtccggcagttcctca
gaaaattggacatagtactaacagaggattccacaatacatctcctgggc
atatatccagaagatgttccatttggtaagaaagacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaatagaggaatggatacaaaaaatgtggtacatttacacaata
gagtactgctcagctattaaaaagaatgtatttatgaaattcctaggtaa
atgtttggacctggagggcatcatcctcagtgaggtaacccaaacgcaaa
agaactcaaatgatatgtactcactgataagtggaatttagcccagaaac
ttagaatacccaagatataagatacaatttgtgaaacacatgaaacttaa
gaacgaagaccaagtgtggacatgtttccccttcttaaaattgggaacaa
aacacccatggaaggagttacaaagacaaagttttgagctgagagaaaat
ggtgaaccatatagacacagccatgtccagggatccatcccataatcagc
ctcaaacgctgacatcattgcatatactaacaatattttgctgaaaggac
cttgatattagctggtcttgtgaaactacacctgggcctagcaaacacca
gaagtggatgttcataggcagcttatggggtggatcaccagggcccacat
ggaggagctagcaagtacccaagagctaagagatctgcaccctattagtg
gaactacattatgactaacagtacctgcagctcttgactctactgcatat
gttatcaaagatgcctagttggccatccttggaaagagaagccctttaga
cttcaacttttatgcccatactgggaagtgcatgtccaaaggatagatgg
tggatgtgggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_25838317_25838932
seq2: B6Ng01-123B06.b_44_659

seq1  GAATTCTCTCCTATCTCTCACTTAGAATACACAGGCTACATACACCAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCCTATCTCTCACTTAGAATACACAGGCTACATACACCAACA  50

seq1  CATATGGTTGTTGAGGGAAACCTACATCCATGCCAGCTAACAAGCTACTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGGTTGTTGAGGGAAACCTACATCCATGCCAGCTAACAAGCTACTC  100

seq1  TATATTTGCCTTTAGCTCTATGTATCTGCACTCAAGGCTTCACTTTCAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTGCCTTTAGCTCTATGTATCTGCACTCAAGGCTTCACTTTCAAA  150

seq1  TTTCTAAATTTCCAAGGTACAAACTAGCAATTATCTGCTTAATTTCTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTAAATTTCCAAGGTACAAACTAGCAATTATCTGCTTAATTTCTTTT  200

seq1  ATCACTAGTTACCACCACAACCCATATTTTATTTTATTTTTACATAATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTAGTTACCACCACAACCCATATTTTATTTTATTTTTACATAATAT  250

seq1  TTTTATTGATTATTTAGGAATTTCATATCATGATTTCTGGGCACACTCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTGATTATTTAGGAATTTCATATCATGATTTCTGGGCACACTCAC  300

seq1  TTTCTTGTCCTCCCAGGTCTGCCCCTACACCCTTGTGACCGCCACACTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTGTCCTCCCAGGTCTGCCCCTACACCCTTGTGACCGCCACACTGG  350

seq1  AAAAACAAAAACAAAACAAAACAAAAAAAGAAAAAGAAAAACAGCTCATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACAAAAACAAAACAAAACAAAAAAAGAAAAAGAAAAACAGCTCATT  400

seq1  TTTGTTGTTGTTGTTGCCCATATGCTCACTGGAGCATGATCAAAGTCTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTGTTGTTGTTGCCCATATGCTCACTGGAGCATGATCAAAGTCTTG  450

seq1  GTGTCCAGTTCCTTAAAGAAAACTGAGTCCTTCTTTACTCTTATGCCTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCCAGTTCCTTAAAGAAAACTGAGTCCTTCTTTACTCTTATGCCTAC  500

seq1  CAGAAGCCATCACTCATGAAGAACTATACTTCAGCATCTGTAACACAATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGCCATCACTCATGAAGAACTATACTTCAGCATCTGTAACACAATG  550

seq1  TTCAGTGTTCTCTTTGATGGATTTTAAATTAATCTGTTACTTTTTTTTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTGTTCTCTTTGATGGATTTTAAATTAATCTGTTACTTTTTTTTGG  600

seq1  GGGGGGGGGTGAAGCG  616
      ||||||||||||||||
seq2  GGGGGGGGGTGAAGCG  616