BAC Information

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BAC

Clone NameB6Ng01-124B22
Chromosome4 (Build37)
Map Location 62,822,158 - 62,920,946
singlet/doubletdoublet
Overlap geneKif12, Col27a1
Upstream geneZfp37, Slc31a2, Fkbp15, Slc31a1, Cdc26, Prpf4, Rnf183, Wdr31, Bspry, Hdhd3, Alad, Pole3, 4933430I17Rik, Rgs3, Zfp618, Ambp
Downstream geneOrm1, Orm-ps, Orm3, Orm2, Akna, Whrn, Atp6v1g1, 6330416G13Rik, LOC670833, 1700018C11Rik, LOC667451, Tnfsf15, Tnfsf8, Rpl17-ps, Tnc
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-124B22.bB6Ng01-124B22.g
ACCDH927109DH927110
length8491,112
definitionDH927109|Mus musculus domesticus DNA, BAC clone: B6Ng01-124B22, 5' end.DH927110|Mus musculus domesticus DNA, BAC clone: B6Ng01-124B22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(62,822,158 - 62,823,003)(62,919,819 - 62,920,946)
sequence
ggggctatacagccctgcctcactgagaagcctggagggtttcttctgaa
aaaataacatcttatttctttattttgtgtgcatgtctgtacacatctgt
gagtatacacatgccatgcatgtatgtggatatcaagaaacaacattcag
aaactggttctctcttttacatatgcgtcccaaggatttaagggcgagag
atgtcattatctgctgagtcatcttgacaatgactcagtctgaagaagtc
cctggctgggcagtggtggtgcacgcctttaatcccagcatttgggaggc
agaggcaagcagatttctgagttcgaggccagcctggtctacagagtgag
ttctaggacagccagagctaaacagagaaaccctgtctcaaaaaaacaaa
acaaaacaaaaaagtccctgggtgcttcctctttgagacatggttgggct
ctctcagctcatgctaactgtgctcagggatacctcactctggggtccag
cccttgctctggggttctgccctccttctggggtccaaccctccctctga
ggtctagccctcgctctggggtccagccctccctctgaggtccagccttt
ccctctgaggttgcagtggacaggtttcacaaaggcctttgaggacattt
ttctcacgagccattctcggcacatatatatcctttctctcttccttcaa
cgtgagagctgcaaccacatttgtttcttgttgctgttgatgaataaatg
acttcagtccattcttggcacacaaaagtataatttgtcactaatttctc
ctgatagggagatggctcctcgtttccccttcccgcggctgtgtgatcc
gaattcctgacctgaaccagatagctgtgtgtcctcaggcaagctctcag
catctctgagtcacagagtgggagacagagccaagcctgggtcaactgat
ctagtgttgggactgccttcctgactctgtgcaggcctggtcacaacagg
cagatccaggccctaaacagcatggtaggggtaggaatccccagtacact
gatgagagagagagagacagagacagagatagagacagagagacagacag
agagagacagagaaagagagagacagagacagaaagaaagggagagagag
acagagagagagacagacagagacagagagaaagagagagagagacacag
agagagagagacagacagacagagagaggcagagacagagacagaaagaa
agagagagagacagagagagagacagacagagacagagagaaagagagag
acacagagagagagagagagagagacagacagacagacagacagagacag
agagagacagagacagagagggagagagagagagcgcactagataagaag
aatcactatagcctctttctagactcaatgagagattctggctagcatgt
ggctcagccgtctgctgtgcgtaaccctgaaccagccgggccagaagtcc
tgccagcactagctaactgccaacattttatatttggaccttcttccaaa
attgcacaccccctttctagcatgagaggtgaggcaagggtgagaactgt
agatttcgctggaggaaaagggagttgatgggggagaaagagaccctgtg
ggaaacgccctgcattatcaatggtcttaaggttcagatccagacttggc
ttccttattttctgtgtgaccctggtcagtggcttgcattcctagtcagt
ggtagtctgattagatgacctgcagatggcagcaaagagctagcactact
ggctaggacccgaagaagttgtcctgagacagtcacatgtctcacccaga
gctctatctcttagagacctagattccgtgacgagaatattggacttcgt
aacgaagttcgagggaacctactttatggattgggtaccattggattcag
agtcagcttgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_62822158_62823003
seq2: B6Ng01-124B22.b_54_902

seq1  GGGGCTATACAGCCCTGCCTCACTGAGAAGCCTGGAGGGTTTCTTCTGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCTATACAGCCCTGCCTCACTGAGAAGCCTGGAGGGTTTCTTCTGAA  50

seq1  AAAATAACATCTTATTTCTTTATTTTGTGTGCATGTCTGTACACATCTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAACATCTTATTTCTTTATTTTGTGTGCATGTCTGTACACATCTGT  100

seq1  GAGTATACACATGCCATGCATGTATGTGGATATCAAGAAACAACATTCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTATACACATGCCATGCATGTATGTGGATATCAAGAAACAACATTCAG  150

seq1  AAACTGGTTCTCTCTTTTACATATGCGTCCCAAGGATTTAAGGGCGAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGGTTCTCTCTTTTACATATGCGTCCCAAGGATTTAAGGGCGAGAG  200

seq1  ATGTCATTATCTGCTGAGTCATCTTGACAATGACTCAGTCTGAAGAAGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCATTATCTGCTGAGTCATCTTGACAATGACTCAGTCTGAAGAAGTC  250

seq1  CCTGGCTGGGCAGTGGTGGTGCACGCCTTTAATCCCAGCATTTGGGAGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCTGGGCAGTGGTGGTGCACGCCTTTAATCCCAGCATTTGGGAGGC  300

seq1  AGAGGCAAGCAGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAGTGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCAAGCAGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAGTGAG  350

seq1  TTCTAGGACAGCCAGAGCTAAACAGAGAAACCCTGTCTCAAAAAAACAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGGACAGCCAGAGCTAAACAGAGAAACCCTGTCTCAAAAAAACAAA  400

seq1  ACAAAACAAAAAAGTCCCTGGGTGCTTCCTCTTTGAGACATGGTTGGGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAACAAAAAAGTCCCTGGGTGCTTCCTCTTTGAGACATGGTTGGGCT  450

seq1  CTCTCAGCTCATGCTAACTGTGCTCAGGGATACCTCACTCTGGGGTCCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCAGCTCATGCTAACTGTGCTCAGGGATACCTCACTCTGGGGTCCAG  500

seq1  CCCTTGCTCTGGGGTTCTGCCCTCCTTCTGGGGTCCAACCCTCCCTCTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTGCTCTGGGGTTCTGCCCTCCTTCTGGGGTCCAACCCTCCCTCTGA  550

seq1  GGTCTAGCCCTCGCTCTGGGGTCCAGCCCTCCCTCTGAGGTCCAGCC-TT  599
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GGTCTAGCCCTCGCTCTGGGGTCCAGCCCTCCCTCTGAGGTCCAGCCTTT  600

seq1  CCCTCTGAGGTCCCAGTGGACAGCTCTCACAGTGGCCTTTGAGGACATTT  649
      |||||||||||  |||||||||| | |||||  |||||||||||||||||
seq2  CCCTCTGAGGTTGCAGTGGACAGGTTTCACAAAGGCCTTTGAGGACATTT  650

seq1  TTCTCAGGAGCCATTCCCAACACATATATATCCTTCCTCTCTTCCTTCAA  699
      |||||| ||||||||| |  ||||||||||||||| ||||||||||||||
seq2  TTCTCACGAGCCATTCTCGGCACATATATATCCTTTCTCTCTTCCTTCAA  700

seq1  CGTGAGAGCTGCAACCACA-TTGTTTCTTGTGGCTGTTGAGGAATAAAGG  748
      ||||||||||||||||||| ||||||||||| |||||||| ||||||| |
seq2  CGTGAGAGCTGCAACCACATTTGTTTCTTGTTGCTGTTGATGAATAAATG  750

seq1  CCTTCGAGCCATGCTTGGCACACAAAGGTATAAGTTGTCACTAA-TTCTC  797
       ||||   |||| ||||||||||||| |||||| |||||||||| |||||
seq2  ACTTCAGTCCATTCTTGGCACACAAAAGTATAATTTGTCACTAATTTCTC  800

seq1  CTGATTGTCAGTTGGCTCCTCGTTTCCCCTTCACGCGGCTGGGTGATCC  846
      ||||| |  || |||||||||||||||||||| |||||||| |||||||
seq2  CTGATAGGGAGATGGCTCCTCGTTTCCCCTTCCCGCGGCTGTGTGATCC  849

seq1: chr4_62919819_62920946
seq2: B6Ng01-124B22.g_67_1178 (reverse)

seq1  TCCAAGACTGACTCTTGGGAATACCAAATGGTACCAATATCATAAAAGTA  50
      |||||| ||||||||   ||||  | ||||||||| | |||   ||||||
seq2  TCCAAG-CTGACTCT---GAAT--CCAATGGTACCCA-ATCCATAAAGTA  43

seq1  GGTTTCCTTG-ACTCTGTTAGGAAAGCCATTGATTCT-GTAAGGGGAATC  98
      |||| ||| | |||  |||| |||  ||| | ||||| || |  ||||||
seq2  GGTTCCCTCGAACTTCGTTACGAAGTCCAAT-ATTCTCGTCA-CGGAATC  91

seq1  TGAGTCTCTAAGAGATAGACCTCTGGGTGAGGCCTTGTGACTGTCACCAA  148
      |  |||||||||||||||| |||||||||| | | ||||||||||  || 
seq2  TAGGTCTCTAAGAGATAGAGCTCTGGGTGA-GACATGTGACTGTC-TCAG  139

seq1  GACAACTTTCTTCGGGTCCTATCCCAGTTGGTGGCTTAGCTCTTTGCTGC  198
      |||||| ||||||||||||||  |||| | |||   ||||||||||||||
seq2  GACAAC-TTCTTCGGGTCCTA-GCCAG-TAGTG--CTAGCTCTTTGCTGC  184

seq1  CATCCTGCAGGTCATCTAATCAGACCTACCACTGACTAGGGAATGCAAGC  248
      ||| |||||||||||||||||||| ||||||||||||| |||||||||||
seq2  CAT-CTGCAGGTCATCTAATCAGA-CTACCACTGACTA-GGAATGCAAGC  231

seq1  CACTTGACCAGGGTCACACAGAAAAT-AGGGAGCCAAGTCTGGATCTGAA  297
      ||| |||||||||||||||||||||| ||| |||||||||||||||||||
seq2  CAC-TGACCAGGGTCACACAGAAAATAAGGAAGCCAAGTCTGGATCTGAA  280

seq1  CC-TAAGACCATTGATAATGCAGGGCGTTTCCCACAGGGTCTCTTTTCTC  346
      || |||||||||||||||||||||||||||||||||||||||||||   |
seq2  CCTTAAGACCATTGATAATGCAGGGCGTTTCCCACAGGGTCTCTTTCTCC  330

seq1  CCCATCAACTCCCTTTTCCTCCAGCGAAATCTACAGTTCTCACCCTTGCC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATCAACTCCCTTTTCCTCCAGCGAAATCTACAGTTCTCACCCTTGCC  380

seq1  TCACCTCTCATGCTAGAAAGGGGGTGTGCAATTTTGGAAGAAGGTCCAAA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTCTCATGCTAGAAAGGGGGTGTGCAATTTTGGAAGAAGGTCCAAA  430

seq1  TATAAAATGTTGGCAGTTAGCTAGTGCTGGCAGGACTTCTGGCCCGGCTG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAATGTTGGCAGTTAGCTAGTGCTGGCAGGACTTCTGGCCCGGCTG  480

seq1  GTTCAGGGTTACGCACAGCAGACGGCTGAGCCACATGCTAGCCAGAATCT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAGGGTTACGCACAGCAGACGGCTGAGCCACATGCTAGCCAGAATCT  530

seq1  CTCATTGAGTCTAGAAAGAGGCTATAGTGATTCTTCTTATCTAGTGCGCT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTGAGTCTAGAAAGAGGCTATAGTGATTCTTCTTATCTAGTGCGCT  580

seq1  CTCTCTCTCTCCCTCTCTGTCTCTGTCTCTCTCTGTCTCTGTCTGTCTGT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCCCTCTCTGTCTCTGTCTCTCTCTGTCTCTGTCTGTCTGT  630

seq1  CTGTCTGTCTCTCTCTCTCTCTCTCTCTGTGTCTCTCTCTTTCTCTCTGT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTGTCTCTCTCTCTCTCTCTCTCTGTGTCTCTCTCTTTCTCTCTGT  680

seq1  CTCTGTCTGTCTCTCTCTCTGTCTCTCTCTCTTTCTTTCTGTCTCTGTCT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTCTGTCTCTCTCTCTGTCTCTCTCTCTTTCTTTCTGTCTCTGTCT  730

seq1  CTGCCTCTCTCTGTCTGTCTGTCTCTCTCTCTCTGTGTCTCTCTCTCTCT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTCTCTCTGTCTGTCTGTCTCTCTCTCTCTGTGTCTCTCTCTCTCT  780

seq1  TTCTCTCTGTCTCTGTCTGTCTCTCTCTCTGTCTCTCTCTCCCTTTCTTT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTCTGTCTCTGTCTGTCTCTCTCTCTGTCTCTCTCTCCCTTTCTTT  830

seq1  CTGTCTCTGTCTCTCTCTTTCTCTGTCTCTCTCTGTCTGTCTCTCTGTCT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTCTGTCTCTCTCTTTCTCTGTCTCTCTCTGTCTGTCTCTCTGTCT  880

seq1  CTATCTCTGTCTCTGTCTCTCTCTCTCTCATCAGTGTACTGGGGATTCCT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTCTGTCTCTGTCTCTCTCTCTCTCATCAGTGTACTGGGGATTCCT  930

seq1  ACCCCTACCATGCTGTTTAGGGCCTGGATCTGCCTGTTGTGACCAGGCCT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCTACCATGCTGTTTAGGGCCTGGATCTGCCTGTTGTGACCAGGCCT  980

seq1  GCACAGAGTCAGGAAGGCAGTCCCAACACTAGATCAGTTGACCCAGGCTT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAGAGTCAGGAAGGCAGTCCCAACACTAGATCAGTTGACCCAGGCTT  1030

seq1  GGCTCTGTCTCCCACTCTGTGACTCAGAGATGCTGAGAGCTTGCCTGAGG  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCTGTCTCCCACTCTGTGACTCAGAGATGCTGAGAGCTTGCCTGAGG  1080

seq1  ACACACAGCTATCTGGTTCAGGTCAGGAATTC  1128
      ||||||||||||||||||||||||||||||||
seq2  ACACACAGCTATCTGGTTCAGGTCAGGAATTC  1112