BAC Information

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BAC

Clone NameB6Ng01-124P14
Chromosome4 (Build37)
Map Location 80,344,326 - 80,345,210
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneTyrp1, D4Bwg0951e, Mpdz, LOC100040131
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-124P14.bB6Ng01-124P14.g
ACCDH927740DH927741
length292929
definitionDH927740|Mus musculus domesticus DNA, BAC clone: B6Ng01-124P14, 5' end.DH927741|Mus musculus domesticus DNA, BAC clone: B6Ng01-124P14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
catgaaaaacataaaactggaaagccatattatattcaaaggacatgtag
gataaaaataaatacaagatgtaaaattaaaagtagaagaaaaagtctgg
acatggcattatgagacaaggaacttcagtgccgctgaggacatttcctg
tcttctggtgggcaagcagcctgctcttaagagtaatttgtttccttggt
gagactcccttggagaaaaataaattttcatttgtaagtagttaccaact
agaaatagcttctggattgaggatatgatgggggatggggag

gaattcattgtattgatgagctatcaataaaaaacttacaaacacagata
aagtattgctaactgacttgaaggatagctatgcaatttgataccaatta
gcaaataatgacttcttatttgcaagaatttttctctgaaaaaggaagag
attgtttattaaatggacaggatgggtgttacagatatttcatgtaaagc
cagagtaaatttggtcattcgtaacaaataaagaagttgaggtatgtttt
agaaagctatgatagataattgtgaggaatctcttctatagctagtaagt
gtagaaaatataatgcactatatctctagtgacactagctgctcttgaga
gctactgggttgtttagataataaagactctcctttcgagcaatttgcaa
attcatctggaataacaaaaaacctaggatagcaaaaactcttctcaagg
ataaaagaacctctggtggaatcaccatgcctgacctaaagctttactac
agagcaattgtggtaaaaactgcatggtactggtatagagacagacaagt
agaccaatggaatagaattgaagacccagaaatgaacccacacacctatg
gtcacttgatcttcgacaagggagctaaaaccatccagtgggaagaaaga
cagcatttttcaacaattggtgctggcacaactgggttgttatcatgtag
aagaatgcgaatcgatccatacttatctcctttgtactaaggtcaaatct
aagtggatcaaggaacttcacataaaccagagacactgaaactacagagg
agaaagtggggaaaagccttgaagatatgggcacaggggaaataattcct
gaacagacagcattggcttgtgctgtagatcgagaattgacaaatgggaa
ctaatgaaactccaaagtttctgcaggca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_80344326_80345210
seq2: B6Ng01-124P14.g_70_955

seq1  GAATTCATTGTATTGATGAGCTATCAATAAAAAACTTACAAACACAGATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTGTATTGATGAGCTATCAATAAAAAACTTACAAACACAGATA  50

seq1  AAGTATTGCTAACTGACTTGAAGGATAGCTATGCAATTTGATACCAATTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATTGCTAACTGACTTGAAGGATAGCTATGCAATTTGATACCAATTA  100

seq1  GCAAATAATGACTTCTTATTTGCAAGAATTTTTCTCTGAAAAAGGAAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATAATGACTTCTTATTTGCAAGAATTTTTCTCTGAAAAAGGAAGAG  150

seq1  ATTGTTTATTAAATGGACAGGATGGGTGTTACAGATATTTCATGTAAAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTTATTAAATGGACAGGATGGGTGTTACAGATATTTCATGTAAAGC  200

seq1  CAGAGTAAATTTGGTCATTCGTAACAAATAAAGAAGTTGAGGTATGTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTAAATTTGGTCATTCGTAACAAATAAAGAAGTTGAGGTATGTTTT  250

seq1  AGAAAGCTATGATAGATAATTGTGAGGAATCTCTTCTATAGCTAGTAAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGCTATGATAGATAATTGTGAGGAATCTCTTCTATAGCTAGTAAGT  300

seq1  GTAGAAAATATAATGCACTATATCTCTAGTGACACTAGCTGCTCTTGAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAAAATATAATGCACTATATCTCTAGTGACACTAGCTGCTCTTGAGA  350

seq1  GCTACTGGGTTGTTTAGATAATAAAGACTCTCCTTTCGAGCAATTTGCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACTGGGTTGTTTAGATAATAAAGACTCTCCTTTCGAGCAATTTGCAA  400

seq1  ATTCATCTGGAATAACAAAAAACCTAGGATAGCAAAAACTCTTCTCAAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATCTGGAATAACAAAAAACCTAGGATAGCAAAAACTCTTCTCAAGG  450

seq1  ATAAAAGAACCTCTGGTGGAATCACCATGCCTGACCTAAAGCTTTACTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAGAACCTCTGGTGGAATCACCATGCCTGACCTAAAGCTTTACTAC  500

seq1  AGAGCAATTGTGGTAAAAACTGCATGGTACTGGTATAGAGACAGACAAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCAATTGTGGTAAAAACTGCATGGTACTGGTATAGAGACAGACAAGT  550

seq1  AGACCAATGGAATAGAATTGAAGACCCAGAAATGAACCCACACACCTATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCAATGGAATAGAATTGAAGACCCAGAAATGAACCCACACACCTATG  600

seq1  GTCACTTGATCTTCGACAAGGGAGCTAAAACCATCCAGT-GGAAGAAAGA  649
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  GTCACTTGATCTTCGACAAGGGAGCTAAAACCATCCAGTGGGAAGAAAGA  650

seq1  CAGCA-TTTTCAACAATTGGTGCTGGCACAACT-GGTTGTTATCATGTAG  697
      ||||| ||||||||||||||||||||||||||| ||||||||||||||||
seq2  CAGCATTTTTCAACAATTGGTGCTGGCACAACTGGGTTGTTATCATGTAG  700

seq1  AAGAATGCGAATCGATCCATACTTATCTCC-TTGTACTAAGGTCAAATCT  746
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  AAGAATGCGAATCGATCCATACTTATCTCCTTTGTACTAAGGTCAAATCT  750

seq1  AAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTGAAACTTACAGA  796
      ||||||||||||||||||||||| ||||||||||||||||||| ||||||
seq2  AAGTGGATCAAGGAACTTCACAT-AAACCAGAGACACTGAAAC-TACAGA  798

seq1  GGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGGGGAAA-AATTC  845
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGGGGAAATAATTC  848

seq1  CTGAACAGAACAGCAATGGCTTGTGCTGTAAGATCGAGAA  885
      |||||||| |||||| ||||||||||||| ||||||||||
seq2  CTGAACAG-ACAGCATTGGCTTGTGCTGT-AGATCGAGAA  886


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