BAC Information

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BAC

Clone NameB6Ng01-125K24
Chromosome4 (Build37)
Map Location 125,940,743 - 126,113,211
singlet/doubletdoublet
Overlap geneTrappc3, Col8a2, EG667193, Adprhl2, Tekt2, Eif2c3
Upstream geneLOC100039298, Grik3, Ftl2, Csf3r, Mrps15, 1810007P19Rik, LOC100039645, Lsm10, Stk40, 2610027C15Rik, 1700029G01Rik, Thrap3, Mtap7d1
Downstream geneEif2c1, LOC100039351, Eif2c4, Clspn, LOC665197, 5730409E04Rik, LOC620877, Psmb2, Tcfap2e, Ncdn, AU040320, Sfpq, Zmym1, LOC665245, Zmym6, LOC100039968, LOC621588, Dlgap3, BC003266, Gja4, Gjb3, Gjb4, Gjb5, LOC667296
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-125K24.bB6Ng01-125K24.g
ACCDH928253DH928254
length1,0981,005
definitionDH928253|Mus musculus domesticus DNA, BAC clone: B6Ng01-125K24, 5' end.DH928254|Mus musculus domesticus DNA, BAC clone: B6Ng01-125K24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(126,112,118 - 126,113,211)(125,940,743 - 125,941,746)
sequence
gaattctatgaatgatgccggggacacagttttcttagctggcccataga
aggtctacaaggctgctaagtgttgtagacctggcatctggcatcacata
ggaggatggaatttcttccctttcaggatagaagagtcacctcttaccta
gccaaaaggcagttttgggaattcctgtcaggaggaaaggtttggttttg
ttttttaatttactgggctttagatggtagttcattatgccttccttggg
cagggatcatggcagggatacgcaaggcactctaatactcggccttctaa
gcaggctgggaaagggggattctctggttttctctttctccccacttact
aggacttgccttctccctgagccacgagagaggctgggttggtgctctcc
ccttactctgctcctactgacttagaacctctggctgctgtatgatagcc
caggaaagggaatggaaagaatgggctcaaaacaataatgtaaggaaggt
ggtttccttccttaaaaagggaaatcagaaactctccaagaattgtgtaa
gtaaagacaatgtgtctgaatgcactgagtcctctggtgtcatagcaata
aggaaaaatgaattgactttctgtgcatacagtccagcctgactggtgta
tgatgttgcacttagcagccatgtggtgggcatgtgtgactactctgggt
ttcactttattttctaaactttttattcctctcaagtccagcatggatgg
ggaaatgtccctggagccccgcagctgtgtacttgtttgcatttgtttcc
cattgagacttgtgttttgtgtcctgcttttgagctgtaccctgtcccgt
ccattgtgaaatttatcccagcagctgtaatgtacagttcctttctcaag
caagcaacagcagcacaatcttgtgttttataaaaacaacagtggctttt
attctaaagtgcagtctggtttttttttcctaccaacaaaaataaaatgg
gttggcattattacatcttctcatagggtttaggtggaaataatagattg
catgcagtcaccctgcacaggtctctctgtatcttcacttacacaaac
gaattcagggttgtccttagcccgagataagatggaggccagcgtaggct
acttgaagctactacttgaaactatttttaacacacagagtgttggggac
gtggggtgtggggctcacatcaggtttgggaggtaactcagtggtaggat
gcatatgcaggatactctgaattcagacttcaaaaaacagcgggaccaat
ccgaggttgcctgcctgctgactagatctggaaacctatgtactccactc
tggacagtatgattcagtatgattagactttgtgtcttataccaggaaca
gccagcacaggtggaatccctgttattccaggctggttcttccccacccc
accccaccccacccccagagctgagactctaacccagagccttgtgcttg
ctaggcaagcgctctaccactgacctaaatctccaagtccctaggctggt
tctttataaccctcggaccactttcaagacacaatgacagcaatgattca
tctctacacaaatattaaattacacaaacacgaactcagtgatcaaagct
gagttggatcctagcaccgcaaacacaaaatgcaaaaacccgacatcata
tacacacatttcatatacacacatttgtttgtattttccagggatttgtg
tgggcctcagcatactctggggatggtaagttaagaatcagttttagggg
accgagcatgcacacacacacatacacacgatgggggagatttctggaag
aaataacagtagttgagagtttgtgctagaaaaacaatgtcatcttagaa
gaaaatatacacatgttccttgggcattttcaggtgattattagtttctt
tagctacaaaatgggggctggtggtaccaaagactagaggaaagagtgtt
taattaagggatgggatggtgtttccctgggtgatgggagcagacactat
tcttagtctttgtatcctgtatcagaatgtgtttgattctctccggacct
cagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_126112118_126113211
seq2: B6Ng01-125K24.b_48_1145 (reverse)

seq1  GTTTGTG-AAGTGAAGAATACAGAGAGACCCTGTGCAGTGTGACTGCATG  49
      ||||||| |||||||| ||||||||||| ||||||||| |||||||||||
seq2  GTTTGTGTAAGTGAAG-ATACAGAGAGA-CCTGTGCAGGGTGACTGCATG  48

seq1  ACAATCTATTATTCCACCCTAAAACCTATGAG-AGATGTAATTAATACCA  98
       |||||||||||| |  |||||| |||||||| |||||||| |||| |||
seq2  -CAATCTATTATTTCCACCTAAACCCTATGAGAAGATGTAA-TAATGCCA  96

seq1  ACC--ATTTATTTT--GTGGTAGGAAAAAAAAAACAGACTGCACTTTAGA  144
      |||   ||||||||   |||||||||||||||| ||||||||||||||| 
seq2  ACCCATTTTATTTTTGTTGGTAGGAAAAAAAAACCAGACTGCACTTTAG-  145

seq1  AATAAAAGCCACTGTTGTTTTTATAAAACACAAGATTGTGCTGCTGTTGC  194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAAGCCACTGTTGTTTTTATAAAACACAAGATTGTGCTGCTGTTGC  195

seq1  TTGCTTGAGAAGGGAACTGTACATTACAGCTGCTGGGAT-AATTTCACAA  243
      ||||||||||| ||||||||||||||||||||||||||| ||||||||||
seq2  TTGCTTGAGAAAGGAACTGTACATTACAGCTGCTGGGATAAATTTCACAA  245

seq1  TGGACGGGACAGGGTACAGCTC-AAAGCAGGACAC-AAACACAAGTCTCA  291
      |||||||||||||||||||||| |||||||||||| ||||||||||||||
seq2  TGGACGGGACAGGGTACAGCTCAAAAGCAGGACACAAAACACAAGTCTCA  295

seq1  ATGGGAAACAAATGCAAACAAGTACACAGCTGCGGGGCTCCAGGGACATT  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGAAACAAATGCAAACAAGTACACAGCTGCGGGGCTCCAGGGACATT  345

seq1  TCCCCATCCATGCTGGACTTGAGAGGAATAAAAAGTTTAGAAAATAAAGT  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCATCCATGCTGGACTTGAGAGGAATAAAAAGTTTAGAAAATAAAGT  395

seq1  GAAACCCAGAGTAGTCACACATGCCCACCACATGGCTGCTAAGTGCAACA  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCCAGAGTAGTCACACATGCCCACCACATGGCTGCTAAGTGCAACA  445

seq1  TCATACACCAGTCAGGCTGGACTGTATGCACAGAAAGTCAATTCATTTTT  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATACACCAGTCAGGCTGGACTGTATGCACAGAAAGTCAATTCATTTTT  495

seq1  CCTTATTGCTATGACACCAGAGGACTCAGTGCATTCAGACACATTGTCTT  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTATTGCTATGACACCAGAGGACTCAGTGCATTCAGACACATTGTCTT  545

seq1  TACTTACACAATTCTTGGAGAGTTTCTGATTTCCCTTTTTAAGGAAGGAA  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTACACAATTCTTGGAGAGTTTCTGATTTCCCTTTTTAAGGAAGGAA  595

seq1  ACCACCTTCCTTACATTATTGTTTTGAGCCCATTCTTTCCATTCCCTTTC  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACCTTCCTTACATTATTGTTTTGAGCCCATTCTTTCCATTCCCTTTC  645

seq1  CTGGGCTATCATACAGCAGCCAGAGGTTCTAAGTCAGTAGGAGCAGAGTA  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGCTATCATACAGCAGCCAGAGGTTCTAAGTCAGTAGGAGCAGAGTA  695

seq1  AGGGGAGAGCACCAACCCAGCCTCTCTCGTGGCTCAGGGAGAAGGCAAGT  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGAGAGCACCAACCCAGCCTCTCTCGTGGCTCAGGGAGAAGGCAAGT  745

seq1  CCTAGTAAGTGGGGAGAAAGAGAAAACCAGAGAATCCCCCTTTCCCAGCC  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGTAAGTGGGGAGAAAGAGAAAACCAGAGAATCCCCCTTTCCCAGCC  795

seq1  TGCTTAGAAGGCCGAGTATTAGAGTGCCTTGCGTATCCCTGCCATGATCC  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTAGAAGGCCGAGTATTAGAGTGCCTTGCGTATCCCTGCCATGATCC  845

seq1  CTGCCCAAGGAAGGCATAATGAACTACCATCTAAAGCCCAGTAAATTAAA  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCCAAGGAAGGCATAATGAACTACCATCTAAAGCCCAGTAAATTAAA  895

seq1  AAACAAAACCAAACCTTTCCTCCTGACAGGAATTCCCAAAACTGCCTTTT  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAACCAAACCTTTCCTCCTGACAGGAATTCCCAAAACTGCCTTTT  945

seq1  GGCTAGGTAAGAGGTGACTCTTCTATCCTGAAAGGGAAGAAATTCCATCC  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTAGGTAAGAGGTGACTCTTCTATCCTGAAAGGGAAGAAATTCCATCC  995

seq1  TCCTATGTGATGCCAGATGCCAGGTCTACAACACTTAGCAGCCTTGTAGA  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTATGTGATGCCAGATGCCAGGTCTACAACACTTAGCAGCCTTGTAGA  1045

seq1  CCTTCTATGGGCCAGCTAAGAAAACTGTGTCCCCGGCATCATTCATAGAA  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTATGGGCCAGCTAAGAAAACTGTGTCCCCGGCATCATTCATAGAA  1095

seq1  TTC  1094
      |||
seq2  TTC  1098

seq1: chr4_125940743_125941746
seq2: B6Ng01-125K24.g_67_1071

seq1  GAATTCAGGGTTGTCCTTAGCCCGAGATAAGATGGAGGCCAGCGTAGGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGGTTGTCCTTAGCCCGAGATAAGATGGAGGCCAGCGTAGGCT  50

seq1  ACTTGAAGCTACTACTTGAAACTATTTTTAACACACAGAGTGTTGGGGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGAAGCTACTACTTGAAACTATTTTTAACACACAGAGTGTTGGGGAC  100

seq1  GTGGGGTGTGGGGCTCACATCAGGTTTGGGAGGTAACTCAGTGGTAGGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGGTGTGGGGCTCACATCAGGTTTGGGAGGTAACTCAGTGGTAGGAT  150

seq1  GCATATGCAGGATACTCTGAATTCAGACTTCAAAAAACAGCGGGACCAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATGCAGGATACTCTGAATTCAGACTTCAAAAAACAGCGGGACCAAT  200

seq1  CCGAGGTTGCCTGCCTGCTGACTAGATCTGGAAACCTATGTACTCCACTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAGGTTGCCTGCCTGCTGACTAGATCTGGAAACCTATGTACTCCACTC  250

seq1  TGGACAGTATGATTCAGTATGATTAGACTTTGTGTCTTATACCAGGAACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACAGTATGATTCAGTATGATTAGACTTTGTGTCTTATACCAGGAACA  300

seq1  GCCAGCACAGGTGGAATCCCTGTTATTCCAGGCTGGTTCTTCCCCACCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGCACAGGTGGAATCCCTGTTATTCCAGGCTGGTTCTTCCCCACCCC  350

seq1  ACCCCACCCCACCCCCAGAGCTGAGACTCTAACCCAGAGCCTTGTGCTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCACCCCACCCCCAGAGCTGAGACTCTAACCCAGAGCCTTGTGCTTG  400

seq1  CTAGGCAAGCGCTCTACCACTGACCTAAATCTCCAAGTCCCTAGGCTGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGCAAGCGCTCTACCACTGACCTAAATCTCCAAGTCCCTAGGCTGGT  450

seq1  TCTTTATAACCCTCGGACCACTTTCAAGACACAATGACAGCAATGATTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTATAACCCTCGGACCACTTTCAAGACACAATGACAGCAATGATTCA  500

seq1  TCTCTACACAAATATTAAATTACACAAACACGAACTCAGTGATCAAAGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTACACAAATATTAAATTACACAAACACGAACTCAGTGATCAAAGCT  550

seq1  GAGTTGGATCCTAGCACCGCAAACACAAAATGCAAAAACCCGACATCATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTGGATCCTAGCACCGCAAACACAAAATGCAAAAACCCGACATCATA  600

seq1  TACACACATTTCATATACACACATTTGTTTGTATTTTCCAGGGATTTGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACACATTTCATATACACACATTTGTTTGTATTTTCCAGGGATTTGTG  650

seq1  TGGGCCTCAGCATACTCTGGGGATGGTAAGTTAAGAATCAGTTTTAGGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCCTCAGCATACTCTGGGGATGGTAAGTTAAGAATCAGTTTTAGGGG  700

seq1  ACCGAGCATGCACACACACACATACACACGATGGGGGAGATTTCTGGAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGAGCATGCACACACACACATACACACGATGGGGGAGATTTCTGGAAG  750

seq1  AAATAACAGTAGTTGAGAGTTTTGTGCTAG-AAAACAATGTCATC-TAGA  798
      ||||||||||||||||||| |||||||||| |||||||||||||| ||||
seq2  AAATAACAGTAGTTGAGAG-TTTGTGCTAGAAAAACAATGTCATCTTAGA  799

seq1  AGAAAATATACACATGTTCCTT-GGCATTTTCAAGTGATTATTAGTTTCT  847
      |||||||||||||||||||||| |||||||||| ||||||||||||||||
seq2  AGAAAATATACACATGTTCCTTGGGCATTTTCAGGTGATTATTAGTTTCT  849

seq1  TTAGCTACAAAATGGGGGCT-GTGGTACCAAAGACTAGAGGAAAGAGTGT  896
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TTAGCTACAAAATGGGGGCTGGTGGTACCAAAGACTAGAGGAAAGAGTGT  899

seq1  TAAATTTAAGGGGATGGATGGTGTTT-CCTTGGTGATGGGAGCAGACACT  945
      | || |||||||   ||||||||||| ||| |||||||||||||||||| 
seq2  TTAA-TTAAGGGATGGGATGGTGTTTCCCTGGGTGATGGGAGCAGACAC-  947

seq1  TATTCCTTAGTCTTTGTATCCTGTTATCAGTATTTGTTTGATT-TCTCCT  994
      |||| |||||||||||||||||| |||||| || ||||||||| ||||| 
seq2  TATT-CTTAGTCTTTGTATCCTG-TATCAGAATGTGTTTGATTCTCTCCG  995

seq1  GGACTCAGTA  1004
      |  ||||| |
seq2  GACCTCAGAA  1005