BAC Information

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BAC

Clone NameB6Ng01-125M18
Chromosome4 (Build37)
Map Location 112,716,488 - 112,892,400
singlet/doubletdoublet
Overlap genenone
Upstream gene9530098N22Rik, A430090E18Rik, A030013N09Rik, LOC665949, LOC630887, OTTMUSG00000008540, LOC100040581, A030001H23Rik, LOC433745, LOC545668
Downstream geneLOC230622, LOC100040607, LOC242627, LOC100040625, A630098G03Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-125M18.bB6Ng01-125M18.g
ACCDH928333DH928334
length1,150920
definitionDH928333|Mus musculus domesticus DNA, BAC clone: B6Ng01-125M18, 5' end.DH928334|Mus musculus domesticus DNA, BAC clone: B6Ng01-125M18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(112,891,222 - 112,892,400)(112,716,488 - 112,717,151)
sequence
gaattcatagccactatgcctcaagttctccattccaagatccaggtcag
aaacttccatctctcagtctccagattaggatcactggtgagcctttcaa
ttctatattgtagttcattccagataaagtcaagttgacaacgaggaata
accactacaatctacccattgtcaacttgacacaaataatatctcatgtc
cacatgaaacaataacaaggtcgtgaatacacctaacatgatataactat
ccctcgtacaatcgcaaatgcatttgtaaatttacaatggggcaatgtcc
cttgggaaaattcttttagtgtctcaccttaaatatttgtctggtaggta
aacagaacctgaagagacagggtaacaaaaggcattattgaggggcacaa
tatggtaaatgattgtgatgtgtctccatgaatatatcttaacaaaactt
atcaatacatgcattgtatgtatggcaataataattagaaactttacgca
catgtttatattttccagcattcttactaacaagatctcatttatgcact
ctacatatcctcgaatggatgcaggacagctatcatctaagcaactggaa
atgaaagtttctgaatatctttacccatttttttcaacctatattttctc
ttttttttttttccagtagagcttctgataacgctatttttaaaagctgg
tgttacctttacattgatcatgctgcaacctctttaccaatgataattct
tatttaattttatcagggagctgtaagatgtaacttgtgcatgtcattac
ccatgctgcaaagaaatattcagcaatatagctatctatattttagttat
cctggctcaagttagtaacttcttacccaatatcatgtgagcaataccaa
ataactcttcagttcaccaatgttgacttccatggaatcattggtctccc
atgggtgtcatgtgaattgaacgaaactgcatgagtcttgatcaggggca
tgcagctgcatgagccagagagggaagatgattcagctagctagttgaag
tttcagagatcagagaggcttttgcaggaacttaggtatgctctgtatca
cagctctttctatgcgtatgatgaagagaacgttttcttgtctaagctgt

gaattcctccatttcctgacccttccccctggccacacttcagaaatatc
tcaacacccataatcagcttgaataagttctgaacgtttgtcatcccagt
tccctggtctttaggaattggggtggttattattggtttcctttgatact
aaaatttttgaagggccgggcatgtacccagttctcctattgcagttatt
ttaaacagatatgagacatttaagcctgtgaatcaaggagaaaataggaa
attcatgcaactgagattatcgttagggtgttttcagttattttaatcct
aaatgcctaagtataaggaacagagaacaatcgagattacttaatgtaga
cagtttgttttcaacatatcagaagtccaaagaatgtgacgtttaatgtt
atttattcagttgttgttgagattagtctgctcctgacagttttgtctgt
cgtaagttcaaagaaaaaacagcatttttgaataattccagttgtgatga
aacagccactggaaacaattgcctcatttctctatagacataatattgtc
caaagaaaggacacaattacaggttacgacaacttgattatgccaataca
gtgtaatatagttcttactattcctgtttctataagtctgtcagacaacc
ctggcctgttggcagaagatggaggctccaatgtgttgaagtaagggact
gtgcaataattggttaagttttggaagctgtgtggttttcctatatattt
ttagttaaaatcagtcgttcttgtatttctgatggggttgaaaaattcca
tagtctcctagccaacacaggattttactttgagaggaacagttttttga
ggatggttttcagatggcattattctaaagcaagaaataaacaaatttag
attataagtctttaaatagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_112891222_112892400
seq2: B6Ng01-125M18.b_48_1197 (reverse)

seq1  ACAGCTTAGACAAGGAAAAACTGTCTCTCTCATCATATACTGCACTAGAA  50
      ||||||||||||||  |||||  ||||| ||||||||    ||| |||||
seq2  ACAGCTTAGACAAG--AAAACGTTCTCT-TCATCATA---CGCA-TAGAA  43

seq1  AGAAGCCTTTGTGATACAGAGCCATACCTAAGTCTCCTGCAAAAAGCCTC  100
      || |||   |||||||||||| ||||||||||| |||||| |||||||||
seq2  AG-AGC---TGTGATACAGAG-CATACCTAAGT-TCCTGC-AAAAGCCTC  86

seq1  TCTGATCTCTGGAAACTCACACCTTAGCTTAGCTGGATTCATCTTCCCCT  150
      |||||||||| ||||||   ||  |||| ||||| || ||||||||||  
seq2  TCTGATCTCT-GAAACTTCAAC--TAGC-TAGCT-GAATCATCTTCCC--  129

seq1  TCTCTTGGCTCATTGCAGGCCTGCATGCCCCTGATCAAGACTCATTGCAG  200
      |||| ||||||| |||||  |||||||||||||||||||||||| |||||
seq2  TCTC-TGGCTCA-TGCAG--CTGCATGCCCCTGATCAAGACTCA-TGCAG  174

seq1  TTTCCGTTCAATTCACCATGACACCCATGGGAGACCAATGATTCCATGGA  250
      ||| ||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TTT-CGTTCAATTCA-CATGACACCCATGGGAGACCAATGATTCCATGGA  222

seq1  AGTCAACATTGGTGAACTGAAGAGTTTATTTGGTATTGCTCACATGATAT  300
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  AGTCAACATTGGTGAACTGAAGAG-TTATTTGGTATTGCTCACATGATAT  271

seq1  TGGGTAAGAAGTTACTAACTTGAGCCAGGATAACTAAAATATAGATAGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTAAGAAGTTACTAACTTGAGCCAGGATAACTAAAATATAGATAGCT  321

seq1  ATATTGCTGAATATTTCTTTGCAGCATGGGTAATGACATGCACAAGTTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGCTGAATATTTCTTTGCAGCATGGGTAATGACATGCACAAGTTAC  371

seq1  ATCTTACAGCTCCCTGATAAAATTAAATAAGAATTATCATTGGTAAAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTACAGCTCCCTGATAAAATTAAATAAGAATTATCATTGGTAAAGAG  421

seq1  GTTGCAGCATGATCAATGTAAAGGTAACACCAGCTTTTAAAAATAGCGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCAGCATGATCAATGTAAAGGTAACACCAGCTTTTAAAAATAGCGTT  471

seq1  ATCAGAAGCTCTACTGGAAAAAAAAAAAAGAGAAAATATAGGTTGAAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGAAGCTCTACTGGAAAAAAAAAAAAGAGAAAATATAGGTTGAAAAA  521

seq1  AATGGGTAAAGATATTCAGAAACTTTCATTTCCAGTTGCTTAGATGATAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGGTAAAGATATTCAGAAACTTTCATTTCCAGTTGCTTAGATGATAG  571

seq1  CTGTCCTGCATCCATTCGAGGATATGTAGAGTGCATAAATGAGATCTTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCCTGCATCCATTCGAGGATATGTAGAGTGCATAAATGAGATCTTGT  621

seq1  TAGTAAGAATGCTGGAAAATATAAACATGTGCGTAAAGTTTCTAATTATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAAGAATGCTGGAAAATATAAACATGTGCGTAAAGTTTCTAATTATT  671

seq1  ATTGCCATACATACAATGCATGTATTGATAAGTTTTGTTAAGATATATTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCCATACATACAATGCATGTATTGATAAGTTTTGTTAAGATATATTC  721

seq1  ATGGAGACACATCACAATCATTTACCATATTGTGCCCCTCAATAATGCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGACACATCACAATCATTTACCATATTGTGCCCCTCAATAATGCCT  771

seq1  TTTGTTACCCTGTCTCTTCAGGTTCTGTTTACCTACCAGACAAATATTTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTACCCTGTCTCTTCAGGTTCTGTTTACCTACCAGACAAATATTTA  821

seq1  AGGTGAGACACTAAAAGAATTTTCCCAAGGGACATTGCCCCATTGTAAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGAGACACTAAAAGAATTTTCCCAAGGGACATTGCCCCATTGTAAAT  871

seq1  TTACAAATGCATTTGCGATTGTACGAGGGATAGTTATATCATGTTAGGTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAAATGCATTTGCGATTGTACGAGGGATAGTTATATCATGTTAGGTG  921

seq1  TATTCACGACCTTGTTATTGTTTCATGTGGACATGAGATATTATTTGTGT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCACGACCTTGTTATTGTTTCATGTGGACATGAGATATTATTTGTGT  971

seq1  CAAGTTGACAATGGGTAGATTGTAGTGGTTATTCCTCGTTGTCAACTTGA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTTGACAATGGGTAGATTGTAGTGGTTATTCCTCGTTGTCAACTTGA  1021

seq1  CTTTATCTGGAATGAACTACAATATAGAATTGAAAGGCTCACCAGTGATC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATCTGGAATGAACTACAATATAGAATTGAAAGGCTCACCAGTGATC  1071

seq1  CTAATCTGGAGACTGAGAGATGGAAGTTTCTGACCTGGATCTTGGAATGG  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATCTGGAGACTGAGAGATGGAAGTTTCTGACCTGGATCTTGGAATGG  1121

seq1  AGAACTTGAGGCATAGTGGCTATGAATTC  1179
      |||||||||||||||||||||||||||||
seq2  AGAACTTGAGGCATAGTGGCTATGAATTC  1150

seq1: chr4_112716488_112717151
seq2: B6Ng01-125M18.g_70_733

seq1  GAATTCCTCCATTTCCTGACCCTTCCCCCTGGCCACACTTCAGAAATATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCCATTTCCTGACCCTTCCCCCTGGCCACACTTCAGAAATATC  50

seq1  TCAACACCCATAATCAGCTTGAATAAGTTCTGAACGTTTGTCATCCCAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACACCCATAATCAGCTTGAATAAGTTCTGAACGTTTGTCATCCCAGT  100

seq1  TCCCTGGTCTTTAGGAATTGGGGTGGTTATTATTGGTTTCCTTTGATACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGGTCTTTAGGAATTGGGGTGGTTATTATTGGTTTCCTTTGATACT  150

seq1  AAAATTTTTGAAGGGCCGGGCATGTACCCAGTTCTCCTATTGCAGTTATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTTTTGAAGGGCCGGGCATGTACCCAGTTCTCCTATTGCAGTTATT  200

seq1  TTAAACAGATATGAGACATTTAAGCCTGTGAATCAAGGAGAAAATAGGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACAGATATGAGACATTTAAGCCTGTGAATCAAGGAGAAAATAGGAA  250

seq1  ATTCATGCAACTGAGATTATCGTTAGGGTGTTTTCAGTTATTTTAATCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATGCAACTGAGATTATCGTTAGGGTGTTTTCAGTTATTTTAATCCT  300

seq1  AAATGCCTAAGTATAAGGAACAGAGAACAATCGAGATTACTTAATGTAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCCTAAGTATAAGGAACAGAGAACAATCGAGATTACTTAATGTAGA  350

seq1  CAGTTTGTTTTCAACATATCAGAAGTCCAAAGAATGTGACGTTTAATGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTGTTTTCAACATATCAGAAGTCCAAAGAATGTGACGTTTAATGTT  400

seq1  ATTTATTCAGTTGTTGTTGAGATTAGTCTGCTCCTGACAGTTTTGTCTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTCAGTTGTTGTTGAGATTAGTCTGCTCCTGACAGTTTTGTCTGT  450

seq1  CGTAAGTTCAAAGAAAAAACAGCATTTTTGAATAATTCCAGTTGTGATGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTAAGTTCAAAGAAAAAACAGCATTTTTGAATAATTCCAGTTGTGATGA  500

seq1  AACAGCCACTGGAAACAATTGCCTCATTTCTCTATAGACATAATATTGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCCACTGGAAACAATTGCCTCATTTCTCTATAGACATAATATTGTC  550

seq1  CAAAGAAAGGACACAATTACAGGTTACGACAACTTGATTATGCCAATACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGAAAGGACACAATTACAGGTTACGACAACTTGATTATGCCAATACA  600

seq1  GTGTAATATAGTTCTTACTATTCCTGTTTCTATAAGTCTGTCAGACAACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAATATAGTTCTTACTATTCCTGTTTCTATAAGTCTGTCAGACAACC  650

seq1  CTGGCCTGTTGGCA  664
      ||||||||||||||
seq2  CTGGCCTGTTGGCA  664