BAC Information

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BAC

Clone NameB6Ng01-126I13
Chromosome3 (Build37)4 (Build37)
Map Location 7,220,791 - 7,221,32753,535,060 - 53,536,199
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100041214, LOC383818, 1700008P02Rik, LOC100039349, Olfr289-ps1, EG667801
Downstream genePkia, LOC667807, 3110050N22Rik, Il7, LOC620822, LOC633072
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-126I13.bB6Ng01-126I13.g
ACCDH928880DH928881
length1,0301,123
definitionDH928880|Mus musculus domesticus DNA, BAC clone: B6Ng01-126I13, 5' end.DH928881|Mus musculus domesticus DNA, BAC clone: B6Ng01-126I13, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(7,220,791 - 7,221,327)(53,535,060 - 53,536,199)
sequence
gaattcctgatctttccagaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggattttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattaaggatttttgc
atcgatgttcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagaataccttctacttctatcttgtgaaaaagtttgtgcagaactgg
agttagatcttctttgaaggtctgatagaactctgcactaaacccgtctg
gtcctgggctttttttggctgggagactattaataactgcttctatttct
ttaggggatatgggactgtttagaaggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtctatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgattttgttaat
taggattttgtccctgtgccctttagtgagtctagctaagggtttatcta
tcttgttgattttctcaaagaaccaactcctcgtttggttaattctttga
atagttcttcttgtttccacttggttgatttcacccctgagtttgattat
ttcctgccgtctactcctcttgggtgaatttgcttcctttttttctagag
cttttagatgtgttgtcaagctgctagtatgtgctctctccgtttttctt
gaagcactcatagctatgagtttcctcttagaatgctttcattgtgtccc
aaaggtttgggtacgttgtggcttcatttt
gaattccatagcatgcactggcatctttgtcacctgtcatgctttgcttg
gattcagccaaaaaccttacagaaaacccaagcttgctagcatcagaagg
agggcggttcattcccgctatgacatagatggtatttgtgcattcaaaaa
tcctactgaggacagaaagaaacccattcatgagaagctagaagaagagc
agaggcaggacagaattcacacgccctgctgaaataagagctcagaaggg
ggctctcaccagacagattcagttttctctacagggcataaggttggcaa
agagaaggaacaagagggattaagagaagaaaggggacggataatcacct
ggaggggatgcagaagagagataaatgaatgaaaggaattatttagacgt
gaatttaaaaaaaaaaaaatagatttcccagcacttttggttagactgga
gctaaacaatctgcctgctggtggcagcacgcacgggtgcggaaccgagg
ataaaggatatagaggctgagaagttattaagtggcaagagagccaggag
aaaagctgatatctacagtgtggtcgcaagcattggggcctgggtattca
gagataaacatagcaagagctgtccctgggaaactcgcacaggattgtca
ggacattataccaaacacaaaggttcaatatggagttcttattggttttg
gtaatggcggttttttaaaggccatttttaaattgttttcttacctagcg
ttatatatttctgagagttgtgtcatatacgaattaaggaccataagaaa
ttacatttacgcatttattacccaattcacgtatcagagtataatttaca
ggtatctagatgtctctgccagcttttaaagatcttcgcaatacagcagt
acgctgcataactaatctatttccagacatgtcttctacctcaccaccca
agtcaagcatagttacaatgtttccccaatacccagaaaacaccccttcc
tcttgctagagaggaacactttactatgattgggtttctttaaacactgc
tacaggactcaagagcttcctcttcacaaaatttaatgattctaatatag
taaaggtcttgaatgggtgattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_7220791_7221327
seq2: B6Ng01-126I13.b_47_583 (reverse)

seq1  ATCAAGTTGACCTTCTAAACAGTCCCATATCCCCTAAAGAAATAGAAGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGTTGACCTTCTAAACAGTCCCATATCCCCTAAAGAAATAGAAGCA  50

seq1  GTTATTAATAGTCTCCCAGCCAAAAAAAGCCCAGGACCAGACGGGTTTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTAATAGTCTCCCAGCCAAAAAAAGCCCAGGACCAGACGGGTTTAG  100

seq1  TGCAGAGTTCTATCAGACCTTCAAAGAAGATCTAACTCCAGTTCTGCACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAGTTCTATCAGACCTTCAAAGAAGATCTAACTCCAGTTCTGCACA  150

seq1  AACTTTTTCACAAGATAGAAGTAGAAGGTATTCTACCCAACTCATTTTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTTTCACAAGATAGAAGTAGAAGGTATTCTACCCAACTCATTTTAT  200

seq1  GAAGCCACTATTACTCTGATACCTAAACCACAGAAAGATCCAACAAAGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCCACTATTACTCTGATACCTAAACCACAGAAAGATCCAACAAAGAT  250

seq1  AGAGAACTTCAGACCAATTTCTCTTATGAACATCGATGCAAAAATCCTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAACTTCAGACCAATTTCTCTTATGAACATCGATGCAAAAATCCTTA  300

seq1  ATAAAATTCTCGCTAACCGAATCCAAGAACACATTAAAGCAATCATCCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATTCTCGCTAACCGAATCCAAGAACACATTAAAGCAATCATCCAT  350

seq1  CCTGACCAAGTAGGTTTTATTCCAGGGATGCAGGGATGGTTTAATATACG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGACCAAGTAGGTTTTATTCCAGGGATGCAGGGATGGTTTAATATACG  400

seq1  AAAATCCATCAATGTAATCCATTATATAAACAAACTCAAAGACAAAAACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AAAATCCATCAATGTAATCCATTATATAAACAAACTCAAAGACAAAATCC  450

seq1  ACATGATCATCTCGTTAGATGCAGAAAAAGCATTTGACAAGATCCAACAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGATCATCTCGTTAGATGCAGAAAAAGCATTTGACAAGATCCAACAC  500

seq1  CCATTCATGATAAAAGTTCTGGAAAGATCAGGAATTC  537
      |||||||||||||||||||||||||||||||||||||
seq2  CCATTCATGATAAAAGTTCTGGAAAGATCAGGAATTC  537

seq1: chr4_53535060_53536199
seq2: B6Ng01-126I13.g_69_1191 (reverse)

seq1  AAATCACCCATTCACATGAACTTTTACTATATTTAGAAATTATTTAAAAT  50
      ||||||||||||||     || ||||||||| |||| ||| |||  ||||
seq2  AAATCACCCATTCA---AGACCTTTACTATA-TTAG-AATCATT--AAAT  43

seq1  TTTTGTAAGAGGAAGCTCTTAGGTCCTGTAGCAGTGTTTATAAGAAACAC  100
      |||   ||||||||||||||  |||||||||||||||||| ||||||| |
seq2  TTTGTGAAGAGGAAGCTCTTGAGTCCTGTAGCAGTGTTTA-AAGAAACCC  92

seq1  AATCATTAGGTAAAGTGTT-CTCTCTAGGCAAGAGG-AGGGGTGTTTTCT  148
      ||||||   |||||||||| ||||||| |||||||| |||||||||||| 
seq2  AATCAT--AGTAAAGTGTTCCTCTCTA-GCAAGAGGAAGGGGTGTTTTC-  138

seq1  TGGGTATTTGTGGGAAACATTTGTTAACTATGCTTGACTTGGGTGGTGAG  198
      ||||||||   ||||||||||   ||||||||||||||||||||||||||
seq2  TGGGTATT--GGGGAAACATT--GTAACTATGCTTGACTTGGGTGGTGAG  184

seq1  GTTAGAAGACATGTCTGGAAATAGATTAGTTATGCAGCGGTACTGCTGTA  248
      | |||||||||||||||||||||||||||||||||||| |||||||||||
seq2  G-TAGAAGACATGTCTGGAAATAGATTAGTTATGCAGC-GTACTGCTGTA  232

seq1  TTGCGAAGATCTTTAAAAGCTGGCAGAGACATCTAGATACCTGTAAATTA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCGAAGATCTTTAAAAGCTGGCAGAGACATCTAGATACCTGTAAATTA  282

seq1  TACTCTGATACGTGAATTGGGTAATAAATGCGTAAATGTAAATTTCTTAT  348
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TACTCTGATACGTGAATTGGGTAATAAATGCGTAAATGT-AATTTCTTAT  331

seq1  GGTCCTTAATTCGTATATGACACAACTCTCAGAAATATATAACGCTAGGT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCTTAATTCGTATATGACACAACTCTCAGAAATATATAACGCTAGGT  381

seq1  AAGAAAACAATTTAAAAATGGCCTTTAAAAAACCGCCATTACCAAAACCA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAACAATTTAAAAATGGCCTTTAAAAAACCGCCATTACCAAAACCA  431

seq1  ATAAGAACTCCATATTGAACCTTTGTGTTTGGTATAATGTCCTGACAATC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGAACTCCATATTGAACCTTTGTGTTTGGTATAATGTCCTGACAATC  481

seq1  CTGTGCGAGTTTCCCAGGGACAGCTCTTGCTATGTTTATCTCTGAATACC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCGAGTTTCCCAGGGACAGCTCTTGCTATGTTTATCTCTGAATACC  531

seq1  CAGGCCCCAATGCTTGCGACCACACTGTAGATATCAGCTTTTCTCCTGGC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCCCCAATGCTTGCGACCACACTGTAGATATCAGCTTTTCTCCTGGC  581

seq1  TCTCTTGCCACTTAATAACTTCTCAGCCTCTATATCCTTTATCCTCGGTT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTGCCACTTAATAACTTCTCAGCCTCTATATCCTTTATCCTCGGTT  631

seq1  CCGCACCCGTGCGTGCTGCCACCAGCAGGCAGATTGTTTAGCTCCAGTCT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCACCCGTGCGTGCTGCCACCAGCAGGCAGATTGTTTAGCTCCAGTCT  681

seq1  AACCAAAAGTGCTGGGAAATCTATTTTTTTTTTTTTAAATTCACGTCTAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAAAAGTGCTGGGAAATCTATTTTTTTTTTTTTAAATTCACGTCTAA  731

seq1  ATAATTCCTTTCATTCATTTATCTCTCTTCTGCATCCCCTCCAGGTGATT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTCCTTTCATTCATTTATCTCTCTTCTGCATCCCCTCCAGGTGATT  781

seq1  ATCCGTCCCCTTTCTTCTCTTAATCCCTCTTGTTCCTTCTCTTTGCCAAC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCGTCCCCTTTCTTCTCTTAATCCCTCTTGTTCCTTCTCTTTGCCAAC  831

seq1  CTTATGCCCTGTAGAGAAAACTGAATCTGTCTGGTGAGAGCCCCCTTCTG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATGCCCTGTAGAGAAAACTGAATCTGTCTGGTGAGAGCCCCCTTCTG  881

seq1  AGCTCTTATTTCAGCAGGGCGTGTGAATTCTGTCCTGCCTCTGCTCTTCT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTTATTTCAGCAGGGCGTGTGAATTCTGTCCTGCCTCTGCTCTTCT  931

seq1  TCTAGCTTCTCATGAATGGGTTTCTTTCTGTCCTCAGTAGGATTTTTGAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGCTTCTCATGAATGGGTTTCTTTCTGTCCTCAGTAGGATTTTTGAA  981

seq1  TGCACAAATACCATCTATGTCATAGCGGGAATGAACCGCCCTCCTTCTGA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACAAATACCATCTATGTCATAGCGGGAATGAACCGCCCTCCTTCTGA  1031

seq1  TGCTAGCAAGCTTGGGTTTTCTGTAAGGTTTTTGGCTGAATCCAAGCAAA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAGCAAGCTTGGGTTTTCTGTAAGGTTTTTGGCTGAATCCAAGCAAA  1081

seq1  GCATGACAGGTGACAAAGATGCCAGTGCATGCTATGGAATTC  1140
      ||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGACAGGTGACAAAGATGCCAGTGCATGCTATGGAATTC  1123