BAC Information

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BAC

Clone NameB6Ng01-127J20
Chromosome4 (Build37)
Map Location 5,744,196 - 5,744,826
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039338, 1700012H17Rik
Downstream geneLOC669309, 3110003A22Rik, Cyp7a1, Sdcbp, Nsmaf, LOC100039397, LOC100039414, Tox
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-127J20.bB6Ng01-127J20.g
ACCDH929684DH929685
length832248
definitionDH929684|Mus musculus domesticus DNA, BAC clone: B6Ng01-127J20, 5' end.DH929685|Mus musculus domesticus DNA, BAC clone: B6Ng01-127J20, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctctgttttagaccaggctggctaaactttctgcctccctatg
tctcccgagtgctgggattacaggcttaatgtgtatgctactaccaccaa
gctttatcaggttttcttatgatcactgtctgttaagaaatattgaaata
gccatcctgaattgaattaaagctgcagtgaaacaacagaaagtatacaa
atttatggaaaccaaacaacttactactgaatgaaaaataggtcaacaca
gaaatcaagacataaattaaaacccttttaaaattgaataaaaatgaatg
caacctatccaaaccaatgtgtcagttagagttactattgctgtgatgaa
accccatgaggaggaaagaggttattgtaaattatatttccaggtaatgg
tctatgactggggaaagtcaggaaaggaactgaaacagaacctggaggca
ggagttcatgcagcttgctcatcatgacttgctaagtctgctttcttata
aaacccaggatcaccatcccaaggatggaatcacccataatggactgagc
tctcatctattagttactaattaagaaaatgatctacagttggatcttat
ggagggatttttctctatttaggttcagaaaattaacttgtgtcaagtta
acataaaatgcgtcagcacaacatgggacacaacaaatacagttcgataa
ggcaagttcatagcactaagtgcctaaagagaaagaaagaaagaaagaaa
gaagaaagaagaagaaagaagaagaaagaaagaaagaaagaaagaaagag
agaagaaagagaaaggataaagaaaaaaaaaa
ttaccactggaagtagggtctgtctctgactctcttgcctacttgtggga
cctgttcttcttactgggttgtctcatccagacttgacaaaatagtaagt
gactggtctttgtttagcttgttatccagtgtctggttgatatccctggg
aggtctgctctaatctgagaggagctggagctgggagttgatcttgaggt
gaatctgggagagaggagaaatgtgggggagagactggggaaagggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_5744196_5744826
seq2: B6Ng01-127J20.b_49_679

seq1  GAATTCTCTCTGTTTTAGACCAGGCTGGCTAAACTTTCTGCCTCCCTATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCTGTTTTAGACCAGGCTGGCTAAACTTTCTGCCTCCCTATG  50

seq1  TCTCCCGAGTGCTGGGATTACAGGCTTAATGTGTATGCTACTACCACCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCGAGTGCTGGGATTACAGGCTTAATGTGTATGCTACTACCACCAA  100

seq1  GCTTTATCAGGTTTTCTTATGATCACTGTCTGTTAAGAAATATTGAAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTATCAGGTTTTCTTATGATCACTGTCTGTTAAGAAATATTGAAATA  150

seq1  GCCATCCTGAATTGAATTAAAGCTGCAGTGAAACAACAGAAAGTATACAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATCCTGAATTGAATTAAAGCTGCAGTGAAACAACAGAAAGTATACAA  200

seq1  ATTTATGGAAACCAAACAACTTACTACTGAATGAAAAATAGGTCAACACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATGGAAACCAAACAACTTACTACTGAATGAAAAATAGGTCAACACA  250

seq1  GAAATCAAGACATAAATTAAAACCCTTTTAAAATTGAATAAAAATGAATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATCAAGACATAAATTAAAACCCTTTTAAAATTGAATAAAAATGAATG  300

seq1  CAACCTATCCAAACCAATGTGTCAGTTAGAGTTACTATTGCTGTGATGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCTATCCAAACCAATGTGTCAGTTAGAGTTACTATTGCTGTGATGAA  350

seq1  ACCCCATGAGGAGGAAAGAGGTTATTGTAAATTATATTTCCAGGTAATGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCATGAGGAGGAAAGAGGTTATTGTAAATTATATTTCCAGGTAATGG  400

seq1  TCTATGACTGGGGAAAGTCAGGAAAGGAACTGAAACAGAACCTGGAGGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGACTGGGGAAAGTCAGGAAAGGAACTGAAACAGAACCTGGAGGCA  450

seq1  GGAGTTCATGCAGCTTGCTCATCATGACTTGCTAAGTCTGCTTTCTTATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTTCATGCAGCTTGCTCATCATGACTTGCTAAGTCTGCTTTCTTATA  500

seq1  AAACCCAGGATCACCATCCCAAGGATGGAATCACCCATAATGGACTGAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCAGGATCACCATCCCAAGGATGGAATCACCCATAATGGACTGAGC  550

seq1  TCTCATCTATTAGTTACTAATTAAGAAAATGATCTACAGTTGGATCTTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATCTATTAGTTACTAATTAAGAAAATGATCTACAGTTGGATCTTAT  600

seq1  GGAGGGATTTTTCTCTATTTAGGTTCAGAAA  631
      |||||||||||||||||||||||||||||||
seq2  GGAGGGATTTTTCTCTATTTAGGTTCAGAAA  631