BAC Information

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BAC

Clone NameB6Ng01-127M01
Chromosome4 (Build37)
Map Location 96,919,197 - 96,920,297
singlet/doubletsinglet
Overlap genenone
Upstream geneCyp2j11, LOC665095, Cyp2j6, Cyp2j9, Cyp2j5, LOC100039415, LOC620779
Downstream geneLOC620883, EG638698, Nfia, LOC100039459, LOC669426, LOC384106
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-127M01.bB6Ng01-127M01.g
ACCDH929785DH929786
length1,086895
definitionDH929785|Mus musculus domesticus DNA, BAC clone: B6Ng01-127M01, 5' end.DH929786|Mus musculus domesticus DNA, BAC clone: B6Ng01-127M01, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattctctcatgtctcatgttttgttttcattttgtgaccaaaga
atttaactaaggtcactgtcatgagaaacagtggtacattccattagagc
atgggtaactcaccagttgttacatcactgagtgcaatgactcctctcct
atgacaactaccaggtatcactaagtctcccctacatgtaaccctaggag
gggcaggccccatgagcttctccccaagcatagtgctcatacccagtctt
ctgtaggcctgtgcacgaaatggcagcttctgggagttcattactgcagt
gggcatgtcactcccagcagacaacagttcatggctttcctcgcccccat
catgtgactcatacatttgttctgccttctctttctcaattgtccctgtg
ccatttgctgatgcctggctgaaagctgaacattcatctattcccaggat
ctacttcctgtagctcacgggaagtgcagatgtaatatgggcttgaagtg
aggcaggaaaatttacttaggacagaaatatagaaaaactgcccagtgct
aaggggaagatggctacatacagagagaaaataaattgagttcctttcta
tctaaaaatgtagatagaaataagaataaaatctttactttagaaggaac
tatcaaattttataagtcattgtaacataccttatggcttgagtgtagaa
atgattttataaataaagcatagaaataccaccagaataaaattttacac
actcaaaaactatattattctatacttgttagaatgcccaaatttaactc
tatcaatattggatttttggttagaaagcagatatctttgttttctcttg
ttgtgatagagaccatcgctatgagcaactagggaggatttcaagttata
actctcagttacattcccatcactgagaaaatcatggctgagctccaggg
aaggacctggaggcaggaagtgaaccagaggctctggggacactgcctac
tgcctgtttactgtttgctttcttctacactcaggccacctgcccaggat
gaaccttacatggactggtcctccctccgactcagt

gaattccagtaccattagcactattcagtaggagtgaaagccctatggta
agcaccagcttgacttctccatgttccattggttacataggtggtgtctt
taccaacagggcttagtacctatttatgaagagcaaccaataatcttggc
aataaccttggttgtttgggtggtcccctggctccctttggccaatagct
ttattagatgggaccaatttctctaactgtaggattcatttggtgacaga
agaccttggattccatctctccagttattcaacaattccatttaagtctt
tatatatgtatatgtcttaggaagttctccatgtgacctcctaaatgccc
cttagttttagctgtagctgtacttcctgtattccctgtgcccatccctc
ttcccctttgtttgatcttgtagtacctgcaaccctcatctatatattca
taactgtctgttgcattcccccttcttagagagatacatccatatcacca
agtccctgattctatctatacccaactctgtagttctacagattgtagct
tgcttataggagatgtaacagctaacatctacatgtaaacgtatacatac
tgtatttgtcctttggggtctaggctaccttagtcatgatgagcttactg
tctccatctacttacatataaatttcatgacttgatttattctaacaact
aaacaatattccaatcccttaatttaccacatttatttatatcaatcatt
gattaacatctaggctgttcccagtttctggatatttgaataaagcagca
ttaaacatggttgagcaagaatctctgtataatgatgtaaagtcccttgg
ctatataatcaagaatggtacagctggatctttttctttattact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_96919197_96920297
seq2: B6Ng01-127M01.b_42_1127 (reverse)

seq1  ACTGATGTCGGAGGGAGGAACCAGTCCATTGTAAAGGTTCCATCCCTGGG  50
      ||||| |||||||||||| ||||||||| ||| |||||| ||| ||||||
seq2  ACTGA-GTCGGAGGGAGG-ACCAGTCCA-TGT-AAGGTT-CAT-CCTGGG  44

seq1  CAGGTGGCCCTGAGTTGTAGAAGAAAGCAAACCAAGTAAAACAGGCAGTA  100
      ||||||| |||||| |||||||||||||||||  ||| ||||||||||||
seq2  CAGGTGG-CCTGAG-TGTAGAAGAAAGCAAAC--AGT-AAACAGGCAGTA  89

seq1  GGCAGTGTTCCCCCAGAGCCTCTGGTTCACTTCCTGCCTCCAGGTCCTTC  150
      ||||||||  ||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGTGT--CCCCAGAGCCTCTGGTTCACTTCCTGCCTCCAGGTCCTTC  137

seq1  CCTGGAGCTTCAGCCATGATTTTTCTCAGTGAT-GGAATGTAACCTGAGA  199
      |||||||| |||||||||| ||||||||||||| ||||||||| ||||||
seq2  CCTGGAGC-TCAGCCATGA-TTTTCTCAGTGATGGGAATGTAA-CTGAGA  184

seq1  GTTATAACTTGAAATCCTCCCTAGTTGCTCATAGCGATGGTCTCTATCAC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATAACTTGAAATCCTCCCTAGTTGCTCATAGCGATGGTCTCTATCAC  234

seq1  AACAAGAGAAAACAAAGATATCTGCTTTCTAACCAAAAATCCAATATTGA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGAGAAAACAAAGATATCTGCTTTCTAACCAAAAATCCAATATTGA  284

seq1  TAGAGTTAAATTTGGGCATTCTAACAAGTATAGAATAATATAGTTTTTGA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGTTAAATTTGGGCATTCTAACAAGTATAGAATAATATAGTTTTTGA  334

seq1  GTGTGTAAAATTTTATTCTGGTGGTATTTCTATGCTTTATTTATAAAATC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTAAAATTTTATTCTGGTGGTATTTCTATGCTTTATTTATAAAATC  384

seq1  ATTTCTACACTCAAGCCATAAGGTATGTTACAATGACTTATAAAATTTGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTACACTCAAGCCATAAGGTATGTTACAATGACTTATAAAATTTGA  434

seq1  TAGTTCCTTCTAAAGTAAAGATTTTATTCTTATTTCTATCTACATTTTTA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTCCTTCTAAAGTAAAGATTTTATTCTTATTTCTATCTACATTTTTA  484

seq1  GATAGAAAGGAACTCAATTTATTTTCTCTCTGTATGTAGCCATCTTCCCC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGAAAGGAACTCAATTTATTTTCTCTCTGTATGTAGCCATCTTCCCC  534

seq1  TTAGCACTGGGCAGTTTTTCTATATTTCTGTCCTAAGTAAATTTTCCTGC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCACTGGGCAGTTTTTCTATATTTCTGTCCTAAGTAAATTTTCCTGC  584

seq1  CTCACTTCAAGCCCATATTACATCTGCACTTCCCGTGAGCTACAGGAAGT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTTCAAGCCCATATTACATCTGCACTTCCCGTGAGCTACAGGAAGT  634

seq1  AGATCCTGGGAATAGATGAATGTTCAGCTTTCAGCCAGGCATCAGCAAAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCCTGGGAATAGATGAATGTTCAGCTTTCAGCCAGGCATCAGCAAAT  684

seq1  GGCACAGGGACAATTGAGAAAGAGAAGGCAGAACAAATGTATGAGTCACA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACAGGGACAATTGAGAAAGAGAAGGCAGAACAAATGTATGAGTCACA  734

seq1  TGATGGGGGCGAGGAAAGCCATGAACTGTTGTCTGCTGGGAGTGACATGC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGGGGGCGAGGAAAGCCATGAACTGTTGTCTGCTGGGAGTGACATGC  784

seq1  CCACTGCAGTAATGAACTCCCAGAAGCTGCCATTTCGTGCACAGGCCTAC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGCAGTAATGAACTCCCAGAAGCTGCCATTTCGTGCACAGGCCTAC  834

seq1  AGAAGACTGGGTATGAGCACTATGCTTGGGGAGAAGCTCATGGGGCCTGC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGACTGGGTATGAGCACTATGCTTGGGGAGAAGCTCATGGGGCCTGC  884

seq1  CCCTCCTAGGGTTACATGTAGGGGAGACTTAGTGATACCTGGTAGTTGTC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCTAGGGTTACATGTAGGGGAGACTTAGTGATACCTGGTAGTTGTC  934

seq1  ATAGGAGAGGAGTCATTGCACTCAGTGATGTAACAACTGGTGAGTTACCC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGAGAGGAGTCATTGCACTCAGTGATGTAACAACTGGTGAGTTACCC  984

seq1  ATGCTCTAATGGAATGTACCACTGTTTCTCATGACAGTGACCTTAGTTAA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTCTAATGGAATGTACCACTGTTTCTCATGACAGTGACCTTAGTTAA  1034

seq1  ATTCTTTGGTCACAAAATGAAAACAAAACATGAGACATGAGAGAATGAAT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTTGGTCACAAAATGAAAACAAAACATGAGACATGAGAGAATGAAT  1084

seq1  TC  1101
      ||
seq2  TC  1086


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