BAC Information

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BAC

Clone NameB6Ng01-128B12
Chromosome4 (Build37)
Map Location 146,958,055 - 146,958,882
singlet/doubletsinglet
Overlap geneOTTMUSG00000010673
Upstream geneOTTMUSG00000010105, LOC666445, MGC117846, OTTMUSG00000010694, LOC626480, LOC666474, LOC666482, LOC434514, LOC626288, LOC666498, LOC100043034, LOC666514, LOC100041561, LOC100041570, OTTMUSG00000010657, LOC384087, LOC666546, LOC666557, LOC545716, LOC666574, LOC666581, EG666588, LOC627701, OTTMUSG00000010671, LOC545718
Downstream gene2610305D13Rik, LOC666618, LOC100043100, LOC666640, LOC194189, LOC666652, LOC100041677, LOC277692, MGC67181, D4Wsu114e, Fv1, Mfn2, Plod1, 2510039O18Rik, Nppb, Nppa, Clcn6, Mthfr, LOC433806, Agtrap, 2610109H07Rik, Mad2l2, Fbxo6, Fbxo44, Fbxo2, Ptchd2, Ubiad1, Frap1, Angptl7, Exosc10, LOC100043151
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-128B12.bB6Ng01-128B12.g
ACCDH930037DH930038
length1,168978
definitionDH930037|Mus musculus domesticus DNA, BAC clone: B6Ng01-128B12, 5' end.DH930038|Mus musculus domesticus DNA, BAC clone: B6Ng01-128B12, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatgtctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatccgtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatctagaagatgccccaactggtaagaaggacacatgctccactat
gttcctagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagtcaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
tagaatacccaagatataaaatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgctggggcctagcaaac
acagagtggatgctcacagtcagctaaaggatggatcacagggctctcaa
tggacgagctagagaaagtacccaaggagctaaagggatctgcatcctat
agtgatcaacattatgactaccagtacccggagctctgactctagctgca
tatgatcaaagttggcctagtcggcatcctgggaaagaggtcattgacac
gtacttatatgctcgtaacaagggaaacccaggccaaaagggggatgggc
gggtagtggagatgggtg
gaattcatacaggagagaaaccttacaaatgcagtgaatgtgacaaatgc
tttacccgaaaattcgatcttggtattcatcagagaattcatacaggaga
gaaaccgtacaaatgcagtgaatgtggcaaatgctttactgacaaacgca
ctctcagaaggcatcagagaattcatacaggagagaaaccttacaaatgc
agtgaatgtgacaaatgctttactgaaaaaggcagtctgagaactcatca
gagaattcatacaggagagaaaccttataaatgcagtgaatgtgacaaat
gctttactgaaaaaggcagtctaggaactcatcagagaattcgtacagga
gagaaaccttacaaatgcagtgaatgtgataaatgctttaccaacaaacc
ccatcttaaatatcagaaaattcatagaggagagaaaccttacaaatagt
ttctatgtgacaaatacaatactcacaatatcagtctgagaaatcatgaa
ttatgtcatacagaagagaatatttataaatgaagtgaacgagacaatcc
tttaccaagatatatcatcttaaaattcattagagaatacttagagaaga
caaacttttcaaatatattgtaggtatgaatcctttccttttggcctatt
tcctagaatgtaacagtgaatacttacaggctagaaacttaactcatgca
ttgtatgaagaaatatctttgacttcatttcaggtcaaagagaacatcta
agaactttttagtgtaaagtatttctgttggggaaaatgtggcatatgtt
ttattcacggtgtattcttgacaacacttgaggctccacactagagaact
agtatgattatgaaaatctttgtgaaatattcatgcatgttcaaatctta
gtaatgtcaactatttatggctggggagaaactctgaaatgtgaaattgt
agaagctttcatgacactttttacttgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_146958055_146958882
seq2: B6Ng01-128B12.g_230_1046

seq1  CATCAGAGAATTCATACAGGAGAGAGACCTCACAAATGTAGTGAATGTGA  50
      ||||||||||||||||||||||||| |||| ||||||| |||||||||||
seq2  CATCAGAGAATTCATACAGGAGAGAAACCTTACAAATGCAGTGAATGTGA  50

seq1  CAAATGCTTTACTGGAAAAGGCAGTCTGAGAATTCATCAGAGAATGCATA  100
      |||||||||||||| ||||||||||||||||| |||||||||||| ||||
seq2  CAAATGCTTTACTGAAAAAGGCAGTCTGAGAACTCATCAGAGAATTCATA  100

seq1  CAGGAGAGAAACCTTACAAGTGTAGTGAATGTGACAAATGCTTTACCCAA  150
      |||||||||||||||| || || |||||||||||||||||||||||  ||
seq2  CAGGAGAGAAACCTTATAAATGCAGTGAATGTGACAAATGCTTTACTGAA  150

seq1  AAATCCCATCTTAATATTCATCAGGGAATTCATACAGGAGAGAAACCTTA  200
      |||  |  |||    | ||||||| |||||| ||||||||||||||||||
seq2  AAAGGCAGTCTAGGAACTCATCAGAGAATTCGTACAGGAGAGAAACCTTA  200

seq1  CAAATGCAGTGAATGTGACAAATGCTTTACCCACAAATCCCATCTTATTA  250
      |||||||||||||||||| |||||||||||| ||||| |||||||||  |
seq2  CAAATGCAGTGAATGTGATAAATGCTTTACCAACAAACCCCATCTTA--A  248

seq1  ATCATCAGAAAATTCATACAGGAGAGAAACCTTACAAATAGTTTACATGT  300
      || ||||||||||||||| |||||||||||||||||||||||||  ||||
seq2  AT-ATCAGAAAATTCATAGAGGAGAGAAACCTTACAAATAGTTTCTATGT  297

seq1  GACAAATACAATACTCACAATGTCAGTCTGAGAAATCATGAATTTTTTCA  350
      ||||||||||||||||||||| |||||||||||||||||||||| | |||
seq2  GACAAATACAATACTCACAATATCAGTCTGAGAAATCATGAATTATGTCA  347

seq1  TACAGTAGAGAATATTTATAAATGAAGTGAACGAGACAATCCTTTACCAA  400
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAAGAGAATATTTATAAATGAAGTGAACGAGACAATCCTTTACCAA  397

seq1  GATATATCATCTTAAAATTCATTAGAGAATAGTTAGAGAAGACAAACTTT  450
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GATATATCATCTTAAAATTCATTAGAGAATACTTAGAGAAGACAAACTTT  447

seq1  TCAAATATATTGTAGGTATGAATCCTTTTTTTTTTTTTTTTGGCCTATTT  500
      |||||||||||||||||||||||||       |||  |||||||||||||
seq2  TCAAATATATTGTAGGTATGAATCC-------TTTCCTTTTGGCCTATTT  490

seq1  CCTAGACTGTAACAGTGAATACTTACAGGCTAGAAACTTAACTCATGCAT  550
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGAATGTAACAGTGAATACTTACAGGCTAGAAACTTAACTCATGCAT  540

seq1  TGTATGAAGAAATATCTTTGACTTCACTTCAGGATAGAGAGAACATCTAA  600
      |||||||||||||||||||||||||| ||||||  | |||||||||||||
seq2  TGTATGAAGAAATATCTTTGACTTCATTTCAGGTCAAAGAGAACATCTAA  590

seq1  GAACTTTTTAGGGTAAAGTATTTCTGTTGGGGAAAATGTGGCATATGTTT  650
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GAACTTTTTAGTGTAAAGTATTTCTGTTGGGGAAAATGTGGCATATGTTT  640

seq1  TATTCATGGTG---TCCTGGCAACACTTGAGGCTCCACACTAGAGAATTA  697
      |||||| ||||   || || ||||||||||||||||||||||||||| ||
seq2  TATTCACGGTGTATTCTTGACAACACTTGAGGCTCCACACTAGAGAACTA  690

seq1  GTGTGATTATGAAAATCTTGTCAAAACATTCATGCAATGTTCAAATCTTA  747
      || ||||||||||||||||    ||| |||||||| ||||||||||||||
seq2  GTATGATTATGAAAATCTTTGTGAAATATTCATGC-ATGTTCAAATCTTA  739

seq1  GATAATGTTAACTATTTAT-GCT-GTGAGAAACTCTGAAAATGTGAAAAT  795
      | |||||| |||||||||| ||| | ||||||||||| |||||||||| |
seq2  G-TAATGTCAACTATTTATGGCTGGGGAGAAACTCTG-AAATGTGAAATT  787

seq1  GTAGAAAGCTTTTCATGACACCTTTTTACTTGT  828
      |||| |||| |||||||||| ||||||||||||
seq2  GTAG-AAGC-TTTCATGACA-CTTTTTACTTGT  817