BAC Information

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BAC

Clone NameB6Ng01-128M07
Chromosome4 (Build37)
Map Location 141,109,732 - 141,109,918
singlet/doubletsinglet
Overlap genenone
Upstream geneArhgef10l, Rcc2, Padi6, Padi4, Padi3, Padi1, Padi2, Sdhb, Atp13a2, Mfap2, Crocc, Necap2, LOC638991, Spata21, D4Ertd22e, Fbxo42, 6330545A04Rik, Arhgef19, Epha2, Gm693, Clcnka, Clcnkb, Hspb7, Gm694, Zbtb17, Spen, LOC100042951, B330016D10Rik
Downstream geneFblim1, BC025833, Slc25a34, Plekhm2, Ddi2, Agmat, Dnajc16, Casp9, Ela2a, Ctrc, Efhd2, Fhad1, Tmem51, 9030409G11Rik, EG665983
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-128M07.bB6Ng01-128M07.g
ACCDH930532DH930533
length1,203623
definitionDH930532|Mus musculus domesticus DNA, BAC clone: B6Ng01-128M07, 5' end.DH930533|Mus musculus domesticus DNA, BAC clone: B6Ng01-128M07, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttcttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcatgagttatttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ctttgtcttattgacagtgtcttttgcgttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcctctgtgccaatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccatttagatttgaccttagtacaaggagataactatggatcgatgctc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattctaccagaggttcttt
tatccttgagaagactttttgctatcctaggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttcttcagagatttgaagtttttatcatataga
tcttcacttacttagttagagtcacgccaagatatttatattatttgtga
ctattgagaaggtgtggttccctaatttctttctcagcttgtttattctt
tgtataggagaaagggcattgacttgttttgagtttattttatatcagct
acttcaccgaagctgtttatcaggtttagggagtttcctcggggagaatt
ttaagggtcctataatatacataccattaccaccggaaaaagggttattt
tggagtcttggtttccattggtatccctgatcttccctttgttgtggcaa
tgt
gaattctttatgtagtttggatagcagtcttctattgaatgtggaggtga
ttaaaaaaatctttttccattctgtaactgtcctctttgtctgaatcata
atgttctttgtctcatatgaagcatttcagtttcgtgaggtcccatttat
tgattatctttcttagcacctatgctattatttttctattcagaaggttt
tctcttctgctagtgaattcaatgttgttccccactttcttttctatcag
gttcagtgtatctgattttatgtggaggtctttgatacatttggagttaa
atttttgttcaggatgataagtatggacctatttgcattcttctacattc
atatatccagtttgatcagcaccatttgttgaagatgcttccttccttcc
ttccttccttccttccttccttccttctttcttttcttttcttttctttt
cttttcttttcttttcttttcttttcttttcttttcttttcttttctttt
cttttcagacagggtttttctgtgtagccctggctgtcctggaactcact
ctgtagaccaggctggccttgaactcagaaatctgcctgcctctgcctcc
cgagtgatgtcgtgcgccaccac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_141109732_141109918
seq2: B6Ng01-128M07.g_492_689 (reverse)

seq1  GTGGTGGCGCATGCCTTTAATTCCAGCACTTGGGAGGCAGAGGCAGGTGG  50
      ||||||||||| |          || |||| ||||||||||||||||  |
seq2  GTGGTGGCGCACG---------ACATCACTCGGGAGGCAGAGGCAGGCAG  41

seq1  ATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAGTGAGTTCCAGGACAGC  100
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  ATTTCTGAGTTCAAGGCCAGCCTGGTCTACAGAGTGAGTTCCAGGACAGC  91

seq1  CAGGGCTACACAGAGAAACCCTGTCTCGAAAAATAAAG-AAAGAAAGAGA  149
      |||||||||||||| ||||||||||| |||||  |||| |||||||   |
seq2  CAGGGCTACACAGAAAAACCCTGTCT-GAAAAGAAAAGAAAAGAAAAGAA  140

seq1  AAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAGA------------  187
      |||||||||||||||||||||||||||||||||||| |            
seq2  AAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAA-AGAAAAGAAAAGA  189

seq1  ---------  187
               
seq2  AAAGAAAGA  198