BAC Information

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BAC

Clone NameB6Ng01-128N05
Chromosome4 (Build37)
Map Location 53,728,877 - 53,848,650
singlet/doubletdoublet
Overlap geneFcmd, Tal2, LOC435784, Tmem38b
Upstream geneLOC100040908, LOC666761, Olfr275, Olfr274-ps1, Olfr273, LOC230185, Olfr272, Olfr271-ps1, Olfr270, 1700054F22Rik, Nipsnap3a, Abca1, 4930522O17Rik, AI427809, LOC100041197, Slc44a1, Fsd1l, LOC666483
Downstream geneLOC670124, LOC100041280, LOC666901, LOC100041303
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-128N05.bB6Ng01-128N05.g
ACCDH930575DH930576
length75952
definitionDH930575|Mus musculus domesticus DNA, BAC clone: B6Ng01-128N05, 5' end.DH930576|Mus musculus domesticus DNA, BAC clone: B6Ng01-128N05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(53,847,895 - 53,848,650)(53,728,877 - 53,728,928)
sequence
gaattcaataactattattattgtgtaagaatgacagtgcttcttatgag
acagtactaaaagggaagaaagagctaagcttatttagggctataactat
cttttgtttttggagcctcaatgtctaacgtagttcctgaaagagaatgc
tgttcagtaacaatgtgatttaatgaagcacacatgacttgaaagttagg
aaaatagttgttgaagacttcagactaaaataaagatgccttggatagaa
gaaataattgcagattaaatttcagaaggctgggggtgtagctcagttgc
tgaagtgcctgtttatcatgcaggaggtactaagttcaattccaagcact
tcaaaagaaaccatgctgagtgcttgtgatgccagcactcgggaggtgga
ggcaatatgacatgaatgtcaaggttcttttctggttcaagcctggggta
cgtgagaccttgaggggagagtcttagagaatagacaactggatgcaaat
gaagacttaaagacctgtgtttgaggtggggttttccgaggggaagggga
ctggatggttatttttgttgtgtttttgagaaaggatcttcatgcacagc
ctccgttggcctggaacttaggatcaccccttgtcagcgtcctgagaact
gagacttcaaacttttcaccatagcacatgctaccatggccaaatgcttt
ttcttgaagattttatgaaaattatagtggcataagtcctaagcctggaa
cccctaagc
taggctagtgagagacttgtctttggggtgtgcaggagtggggggagggg
gt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_53847895_53848650
seq2: B6Ng01-128N05.b_51_809 (reverse)

seq1  GCTTAGGGG-TCCAGGCTTAGGGACTTATGCCACTGTTATTTTCAT-AAA  48
      ||||||||| |||||||||| |||||||||||||| | |||||||| |||
seq2  GCTTAGGGGTTCCAGGCTTA-GGACTTATGCCACTATAATTTTCATAAAA  49

seq1  TCTTCAAG-AAAAGCATTTGGCCATGGTGGCATGTGCTATGGTG-AAAGT  96
      |||||||| ||||||||||||||||||| ||||||||||||||| |||||
seq2  TCTTCAAGAAAAAGCATTTGGCCATGGTAGCATGTGCTATGGTGAAAAGT  99

seq1  TTGAAGTCTCAGTTCTCAGGACGCTGACAAGGGGTGATCCTAAGTTCCAG  146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGTCTCAGTTCTCAGGACGCTGACAAGGGGTGATCCTAAGTTCCAG  149

seq1  GCCAACGGAGGCTGTGCATGAAGATCCTTTCTCAAAAACACAACAAAAAT  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAACGGAGGCTGTGCATGAAGATCCTTTCTCAAAAACACAACAAAAAT  199

seq1  AACCATCCAGTCCCCTTCCCCTCGGAAAACCCCACCTCAAACACAGGTCT  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATCCAGTCCCCTTCCCCTCGGAAAACCCCACCTCAAACACAGGTCT  249

seq1  TTAAGTCTTCATTTGCATCCAGTTGTCTATTCTCTAAGACTCTCCCCTCA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTCTTCATTTGCATCCAGTTGTCTATTCTCTAAGACTCTCCCCTCA  299

seq1  AGGTCTCACGTACCCCAGGCTTGAACCAGAAAAGAACCTTGACATTCATG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCTCACGTACCCCAGGCTTGAACCAGAAAAGAACCTTGACATTCATG  349

seq1  TCATATTGCCTCCACCTCCCGAGTGCTGGCATCACAAGCACTCAGCATGG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATTGCCTCCACCTCCCGAGTGCTGGCATCACAAGCACTCAGCATGG  399

seq1  TTTCTTTTGAAGTGCTTGGAATTGAACTTAGTACCTCCTGCATGATAAAC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTTGAAGTGCTTGGAATTGAACTTAGTACCTCCTGCATGATAAAC  449

seq1  AGGCACTTCAGCAACTGAGCTACACCCCCAGCCTTCTGAAATTTAATCTG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCACTTCAGCAACTGAGCTACACCCCCAGCCTTCTGAAATTTAATCTG  499

seq1  CAATTATTTCTTCTATCCAAGGCATCTTTATTTTAGTCTGAAGTCTTCAA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTATTTCTTCTATCCAAGGCATCTTTATTTTAGTCTGAAGTCTTCAA  549

seq1  CAACTATTTTCCTAACTTTCAAGTCATGTGTGCTTCATTAAATCACATTG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTATTTTCCTAACTTTCAAGTCATGTGTGCTTCATTAAATCACATTG  599

seq1  TTACTGAACAGCATTCTCTTTCAGGAACTACGTTAGACATTGAGGCTCCA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGAACAGCATTCTCTTTCAGGAACTACGTTAGACATTGAGGCTCCA  649

seq1  AAAACAAAAGATAGTTATAGCCCTAAATAAGCTTAGCTCTTTCTTCCCTT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAAAAGATAGTTATAGCCCTAAATAAGCTTAGCTCTTTCTTCCCTT  699

seq1  TTAGTACTGTCTCATAAGAAGCACTGTCATTCTTACACAATAATAATAGT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTACTGTCTCATAAGAAGCACTGTCATTCTTACACAATAATAATAGT  749

seq1  TATTGAATTC  756
      ||||||||||
seq2  TATTGAATTC  759

seq1: chr4_53728877_53728928
seq2: B6Ng01-128N05.g_73_124

seq1  TAGGCTAGTGAGAGACTTGTCTTTGGGGTGTGCAGGAGTGGGGGGAGGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCTAGTGAGAGACTTGTCTTTGGGGTGTGCAGGAGTGGGGGGAGGGG  50

seq1  GT  52
      ||
seq2  GT  52