BAC Information

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BAC

Clone NameB6Ng01-129E23
Chromosome4 (Build37)
Map Location 19,288,761 - 19,289,406
singlet/doubletsinglet
Overlap geneCngb3
Upstream geneLOC667251, LOC435772, LOC623122
Downstream geneCpne3, LOC100040306, 2410005O16Rik, Wwp1, Slc7a13, Atp6v0d2, LOC667282, Ttpa, LOC667301, EG664800, E130310K16Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-129E23.bB6Ng01-129E23.g
ACCDH930928DH930929
length1,212999
definitionDH930928|Mus musculus domesticus DNA, BAC clone: B6Ng01-129E23, 5' end.DH930929|Mus musculus domesticus DNA, BAC clone: B6Ng01-129E23, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggctcatacctaaacataataaaagccatctacagcaaacca
gtagccaacattaaactaaatggagagaatcgcactaaaatcaggtacta
gacaaagctgcccactttctccctacctattcaatatagtacttgaagtt
ctagctagagcaaattccaccagagaactcctaaacttgataaacagctt
aagtgcagtagctagatataaaattatctcaaataaatcaatggcctttc
tctacccaaataataaacggactgagaaagaaattagggaaacaacacca
ttcacaatagtcacaaataatataaaataccttggtgtgactctaactaa
ggaagtaaaagatctgtatgataagaacttcaagtctctgaagaaagaaa
ttaaagaagatctcacaggatggaaagatctcccatgctcatggattggc
aggcttaatatagtaaaaatggctatcctgctgaaagcaatctacagatt
caatgcaatccccatcaaaatcccaactcaattcttcattgagataggaa
ggacaatttgaaaattcacctgtaaaaataaaaaacctaggataggaaaa
actattctcaactataaaataacctctggtggaatcaccatgcctgacat
taagctgtactacatagcaattgtgattaaaaaaaagctgcatgatactg
gtacagtgacagccaagtagaccaattgaatagaattaaagacccagaaa
tgaacccacacacctatggtcacttgatctttgacaagggagctaaaacc
atccagtggaaaaaagacagcattttcaaaaaatggtactggcacaactg
gtggttatcatgtagaagaatgcaaattgatcaattcttatctccttgta
caaagctcaagtctaagtggatcaaagacctccacataagatcaaagaca
ctgaaattaatagacgagaaagtggtaaagcctcaagatatgggcacagg
gaaaattgctaaacagaatagcaatgacatgtgctgtagatcagatgaca
aatggatctcataaaatgcaagctttgtagcaaagaacctgtcaataaga
caaaaagtcaccacgagtgcaaagatttacatctatctgtggaactaatt
cgatatacaaaggctgaactgactcagaatcaaatactcatttaaatggg
gtctgagccttc
gaattccaaggcatccagtcctacagaaagagaccctgtgttagagataa
cactgaaggaagaagcttgagagaagccccagcccagggtcacgtggcac
ggtgaggggcatagccctcctgagatagccctaaacacccagaggacagg
gtaccactaaaatgagcaagtatgtggcagagagatggaaaggaatgaga
agcagaagaatgtacgaataatgaaaagaggtgactacaccacctaagac
cactatgagattctggctttatagctaccaagggccaagtctgggtccat
ggccctgcagcagtgggggtctgttaccaccaaaggccagactgcctggg
gccatgttaatgtctgaaggctattcagagctagccctgccccttgccca
agcatcctgagacagcaggccctgaagaagtgagagcatgagtgctggcc
ctgccacttgcctgctctgaagtggcaagggcactgggagatgcaatctc
cacttgaaacactgcaaaaagctatccctgggggtcatgatagctggaga
actattactgaccctcacaggctgaagcacttaggatatcaagaactcgg
aaaaaaaaaaaaacaaaacaaacaaacaaacaaacaaacaaaaaccaaaa
caaaacaaaaaaaaactgcaccttgcctgggcagtacaatagaactggtc
ctggtagcaaaggtgaaggtgagctgcctcaaaggacatgacagtgacag
aactggccctgaatcttgcagattgaaagccccaggatctccaatggcac
agggcaacaacaggatatctgagaggcgtcccagtgagaatccagtattg
agagtgtagcagaagccagaggcctggaaccacagcaacaactgattgca
atgaacatgtgccagtaaagatgtatagacaactgtgtactgtgtgaccc
accctggcacactacacttcaaatgaatcttttttctttgtgggggagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_19288761_19289406
seq2: B6Ng01-129E23.g_67_712

seq1  GAATTCCAAGGCATCCAGTCCTACAGAAAGAGACCCTGTGTTAGAGATAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAGGCATCCAGTCCTACAGAAAGAGACCCTGTGTTAGAGATAA  50

seq1  CACTGAAGGAAGAAGCTTGAGAGAAGCCCCAGCCCAGGGTCACGTGGCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGAAGGAAGAAGCTTGAGAGAAGCCCCAGCCCAGGGTCACGTGGCAC  100

seq1  GGTGAGGGGCATAGCCCTCCTGAGATAGCCCTAAACACCCAGAGGACAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAGGGGCATAGCCCTCCTGAGATAGCCCTAAACACCCAGAGGACAGG  150

seq1  GTACCACTAAAATGAGCAAGTATGTGGCAGAGAGATGGAAAGGAATGAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCACTAAAATGAGCAAGTATGTGGCAGAGAGATGGAAAGGAATGAGA  200

seq1  AGCAGAAGAATGTACGAATAATGAAAAGAGGTGACTACACCACCTAAGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAAGAATGTACGAATAATGAAAAGAGGTGACTACACCACCTAAGAC  250

seq1  CACTATGAGATTCTGGCTTTATAGCTACCAAGGGCCAAGTCTGGGTCCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTATGAGATTCTGGCTTTATAGCTACCAAGGGCCAAGTCTGGGTCCAT  300

seq1  GGCCCTGCAGCAGTGGGGGTCTGTTACCACCAAAGGCCAGACTGCCTGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCTGCAGCAGTGGGGGTCTGTTACCACCAAAGGCCAGACTGCCTGGG  350

seq1  GCCATGTTAATGTCTGAAGGCTATTCAGAGCTAGCCCTGCCCCTTGCCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATGTTAATGTCTGAAGGCTATTCAGAGCTAGCCCTGCCCCTTGCCCA  400

seq1  AGCATCCTGAGACAGCAGGCCCTGAAGAAGTGAGAGCATGAGTGCTGGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCCTGAGACAGCAGGCCCTGAAGAAGTGAGAGCATGAGTGCTGGCC  450

seq1  CTGCCACTTGCCTGCTCTGAAGTGGCAAGGGCACTGGGAGATGCAATCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCACTTGCCTGCTCTGAAGTGGCAAGGGCACTGGGAGATGCAATCTC  500

seq1  CACTTGAAACACTGCAAAAAGCTATCCCTGGGGGTCATGATAGCTGGAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGAAACACTGCAAAAAGCTATCCCTGGGGGTCATGATAGCTGGAGA  550

seq1  ACTATTACTGACCCTCACAGGCTGAAGCACTTAGGATATCAAGAACTCGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTACTGACCCTCACAGGCTGAAGCACTTAGGATATCAAGAACTCGG  600

seq1  AAAAAAAAAAAAACAAAACAAACAAACAAACAAACAAACAAAAACC  646
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAACAAAACAAACAAACAAACAAACAAACAAAAACC  646