BAC Information

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BAC

Clone NameB6Ng01-129I08
Chromosome4 (Build37)
Map Location 131,024,367 - 131,124,394
singlet/doubletdoublet
Overlap geneGm831, EG664832
Upstream geneZcchc17, Wdr57, 2610200G18Rik, Pum1, LOC622577, Sdc3, Laptm5, Matn1, LOC622681, LOC100041575
Downstream geneLOC100039799, Ptpru, Mecr, Sfrs4, EG664865, EG623230, Epb4.1, LOC666480, LOC100039835, Oprd1, LOC664894, Ythdf2, LOC664903, Gmeb1, Rnu11, Taf12, 9530096D07Rik, LOC100039864, Trspap1, Rcc1, Snhg3, Phactr4, Med18, Sesn2, Atpif1, Dnajc8, Ptafr
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-129I08.bB6Ng01-129I08.g
ACCDH931080DH931081
length1,005734
definitionDH931080|Mus musculus domesticus DNA, BAC clone: B6Ng01-129I08, 5' end.DH931081|Mus musculus domesticus DNA, BAC clone: B6Ng01-129I08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(131,123,851 - 131,124,394)(131,024,367 - 131,024,921)
sequence
gaattcttttggatatctactattttataaactaatttttagaagtatat
gttatgttaaatatatatttattttatatattcattaggtatataatata
tccattaggtatataacaaattcactaggtatataatatattcattagat
acataatatattcattagatacatgatatatttttatatgccatatatta
aatatatattaaaaaggaatttgaacacagatgtatagaagttaggcccg
ttttttcctcctagccccatgctcccagaaataagactcagcctcaaaat
atatttacaaataccttggccatatagctaggctctactctgatcagata
taacttaaaatatcccatttgttctagcctacactctgccacatggctgg
ttacctgttctcacgtcttcctgggccattctttcatgccttgctctgtc
ctagaattttttctcctcctggacattccaccacctattaactgcccaag
ccataggccataggctttttaattgaccggtgatgcatccatatgataca
cgagatattctctctacacaggtgctctgcatgggcagacaatgcctctc
tcagaaaccatgtgttattaaatgaaaatctcagtggcagatgtgtgata
cctctccatcacagctattggcccacgaagccccagaagcccccaaccaa
tagcacagggtacagccaatgctctagaactagatggtcaaaccctactg
tggaagtataagagacttcgactctaggacatagagaaattaatctagaa
ctgatctgaaaacttcgttttttgctggacagctagcaaagaactggaag
gttctctgcaggctgctggattagaaaagccatcacagtcttccccagtg
gcatgccacgacactgacctgccggtcaggatgcccatggttacatagtg
gcatgaaggttatgcaaaccccaactgcttttgagatagatttgagacct
gctcc
gaattcctgtcccaacttctgtcagcgatgagctattatgtggacgtata
agccaaatgaaccctttcttcctgaatttgcttgtgtatgtaatgtttca
tcacagtaatagtaaccctaagctaaggcacagtatcaaaggatggggta
gtaggatggattatgaggtaaaggtgtttgtcactcaaacctgagactct
gagattcatcctgggaacttgtgtaaaggtagaatgagaaaaacaactcc
ataaagttgtcctgaccttcacacacacacacacacactcaatttaaaag
gaagttcctcaggcaaaacgaatctccagtagagtcttaagattacacaa
aagaataggattcttaaaatgaaataaagataaaaatcacatgaattttc
tttgctaattttaattgcactaaagcataaatgactgcctgaagaagaag
aagaatttattatatgctttagtatgcttgaaattgagataacaaaaata
ttacacaggctaagaggtcaggatgggaaacatgccgctgttgggccatt
agactattcttgagtgacatggtattatttgagggtatactcagattaat
ttaaatatatattgcaaacactgtggtgagcactcacagtgctcttccaa
gagaaaaaagaagaaataaaactgaaccatgaatgtgttgttagctcagg
agaaagaataaataataaataaactacaagaact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_131123851_131124394
seq2: B6Ng01-129I08.b_47_590 (reverse)

seq1  ATATGGATGCATCACCGGTCAATTAAAAAGCCTATGGCCTATGGCTTGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGGATGCATCACCGGTCAATTAAAAAGCCTATGGCCTATGGCTTGGG  50

seq1  CAGTTAATAGGTGGTGGAATGTCCAGGAGGAGAAAAAATTCTAGGACAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTAATAGGTGGTGGAATGTCCAGGAGGAGAAAAAATTCTAGGACAGA  100

seq1  GCAAGGCATGAAAGAATGGCCCAGGAAGACGTGAGAACAGGTAACCAGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGGCATGAAAGAATGGCCCAGGAAGACGTGAGAACAGGTAACCAGCC  150

seq1  ATGTGGCAGAGTGTAGGCTAGAACAAATGGGATATTTTAAGTTATATCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGCAGAGTGTAGGCTAGAACAAATGGGATATTTTAAGTTATATCTG  200

seq1  ATCAGAGTAGAGCCTAGCTATATGGCCAAGGTATTTGTAAATATATTTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGAGTAGAGCCTAGCTATATGGCCAAGGTATTTGTAAATATATTTTG  250

seq1  AGGCTGAGTCTTATTTCTGGGAGCATGGGGCTAGGAGGAAAAAACGGGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGAGTCTTATTTCTGGGAGCATGGGGCTAGGAGGAAAAAACGGGCC  300

seq1  TAACTTCTATACATCTGTGTTCAAATTCCTTTTTAATATATATTTAATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTCTATACATCTGTGTTCAAATTCCTTTTTAATATATATTTAATAT  350

seq1  ATGGCATATAAAAATATATCATGTATCTAATGAATATATTATGTATCTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCATATAAAAATATATCATGTATCTAATGAATATATTATGTATCTAA  400

seq1  TGAATATATTATATACCTAGTGAATTTGTTATATACCTAATGGATATATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATATATTATATACCTAGTGAATTTGTTATATACCTAATGGATATATT  450

seq1  ATATACCTAATGAATATATAAAATAAATATATATTTAACATAACATATAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACCTAATGAATATATAAAATAAATATATATTTAACATAACATATAC  500

seq1  TTCTAAAAATTAGTTTATAAAATAGTAGATATCCAAAAGAATTC  544
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAAAAATTAGTTTATAAAATAGTAGATATCCAAAAGAATTC  544

seq1: chr4_131024367_131024921
seq2: B6Ng01-129I08.g_243_799

seq1  TTGTCACTCAAACCTGAGACTCTGAGATTCATCCTGGGAACTTGTGTAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCACTCAAACCTGAGACTCTGAGATTCATCCTGGGAACTTGTGTAAA  50

seq1  GGTAGAATGAGAAAAACAACTCCATAAAGTTGTCCTGACCTTCACACACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGAATGAGAAAAACAACTCCATAAAGTTGTCCTGACCTTCACACACA  100

seq1  CACACACACACTCAATTTAAAAGGAAGTTCCTCAGGCAAAACGAATCTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACTCAATTTAAAAGGAAGTTCCTCAGGCAAAACGAATCTCC  150

seq1  AGTAGAGTCTTAAGATTACACAAAAGAATAGGATTCTTAAAATGAAATAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGAGTCTTAAGATTACACAAAAGAATAGGATTCTTAAAATGAAATAA  200

seq1  AGATAAAAATCACATGAATTTTCTTTGCTAATTTTAATTGCACTAAAGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAAAAATCACATGAATTTTCTTTGCTAATTTTAATTGCACTAAAGCA  250

seq1  TAAATGACTGCCTGAAGAAGAAGAAGAATTTATTATATGCTTTAGTATGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGACTGCCTGAAGAAGAAGAAGAATTTATTATATGCTTTAGTATGC  300

seq1  TTGAAATTGAGATAACAAAAATATTACACAGGCTAAGAGGTCAGGATGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAATTGAGATAACAAAAATATTACACAGGCTAAGAGGTCAGGATGGG  350

seq1  AAACATGCCGCTGTTGGGCCATTAGACTATTCTTGAGTGACATGGTATTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATGCCGCTGTTGGGCCATTAGACTATTCTTGAGTGACATGGTATTA  400

seq1  TTTGAGGGTATACTCAGATTAATTTAAATATATATTGCAAACACTGTGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGGGTATACTCAGATTAATTTAAATATATATTGCAAACACTGTGGT  450

seq1  GAGCACTCACAGTGCTCTTCCAAGAG-AAAAAGAAGAAATAAAACTGAAC  499
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GAGCACTCACAGTGCTCTTCCAAGAGAAAAAAGAAGAAATAAAACTGAAC  500

seq1  CATGAATGTGTTGTTAGCTCAAGAGAAAGAATAAA-AATAAAGAAACAAC  548
      ||||||||||||||||||||| ||||||||||||| |||||| |||| ||
seq2  CATGAATGTGTTGTTAGCTCAGGAGAAAGAATAAATAATAAATAAACTAC  550

seq1  AAGAACT  555
      |||||||
seq2  AAGAACT  557