BAC Information

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BAC

Clone NameB6Ng01-130D06
Chromosome4 (Build37)
Map Location 90,965,091 - 90,966,185
singlet/doubletsinglet
Overlap geneElavl2
Upstream geneLOC619842, LOC435792, Ppia-ps4_804.1, LOC664840, LOC664848, LOC100042274
Downstream geneLOC664864, LOC620016, LOC654475, 4930577H14Rik, LOC664886, 1700011H22Rik, LOC68280
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-130D06.bB6Ng01-130D06.g
ACCDH931577DH931578
length1,0861,235
definitionDH931577|Mus musculus domesticus DNA, BAC clone: B6Ng01-130D06, 5' end.DH931578|Mus musculus domesticus DNA, BAC clone: B6Ng01-130D06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgtattttcatcttttctaacacctatgaatcatcccctcaata
agaacctagaaacaccagtaatttaaaggtttaaaacaatggtatgagac
attgaaattttaacatgttaaatcacaattctttgtgtttgagaaggtaa
gtgcccaacttgagatctatcccataggcaagaaccaatccttgacacta
ttaatgatattctgttatgctatagacaggagcctaacataactgttctc
tgagaggctccaaccagcaactgacctgagctcaggaagccttgtggaaa
ggtttggggaaggattgagggacctggaatgtatacctactcaataagaa
gaccaacagaatctactaacctggatctttggaggcttccagagactgaa
ccaccaagcaacaagcatacatgcacatatttagcatatgtgcagcttgg
tcttcatttgggtcctccaacaactgaagcaggggttggctgtccctgac
tctgctgcgtacctgtggatcttgttcccctaactgagctgctttgtatg
gtggcctcagtggaagagggtgtgcctaggactgcagtgacttgatgtgc
tagggtggaatggtacccagcccacacttttctcagaacagaagaggcag
agatggaagaatggagagagggactgtgtgagggattggaactaggagaa
ttgggggaggggctgggttccagatgtaaagtaaataaataaattaatta
atggaacaaaaaaatataaagcagactaagaggaaccatcatccattcca
gctgtgtgatgaagagttctcatatgagtcccaaggttaggaagatttca
gaggacagtagattgtagactctggtgtaatgatcagctcttccttatga
gacattaaaacatcaacgagggaggcagtaaaccttccattgaccttgaa
gaccatacagtaatctagtttattgttacctgcattatacctcccctgaa
gtttttctaaaaagagatttgacttcttaaggtaaatcccaaggtaaaca
agctatgagaaatatctagggcaaggtaataatctg
gaattcatctgtgaggagagcaaagtgatatctgcagaaaactggagagc
ttacactacaataaaacattaggcctagtaaatgagtttactaagggctc
aacatatacaactatggaataaaaaaagtggcatttctataggctaacag
tattgggaaatgtttgactaatatttgttataatagcaaaatacaaaaca
cacagggataaattggaggagagaggtaaaggacttggactctgaaaatt
ataaagcactgaggacaaaagttagcagaagacatgagtagcttagagat
cgcttttgctcatgcaccggaagaattaatagtgttaaaatgtactgagt
gtccaaaatgttctacagaccaaatgcaatccctatcaaatttccaataa
catttttcaaagataagaagacaatcttagaattcatttgaaaacacaaa
ggggcaaaggacaagtagtttcagatatgcaagatgaatgggtcctggat
atcagatctgcagcaccgtggctgcagttattactgttttctacacatag
aaattgggtatgagggtagataataaatgtctcaaaataaaaaaaaatgt
ggtaagtggaagaagccctgattgtatgtttattatggacaaagtacccc
aatactttagacctatgtacttggaatactgaatccttgccctggtccag
gtacggatgataacactggtgtgtgcagaaagtataattgtggtgtgtgc
agaaaataccatcctaggtgactgagacaagagatggatccccaactcct
aaatgactgagacatgagactgagcccccattaggatagtctccttcaga
gattaactaacctacctgtctgttcagctgatatatacacataagtatat
aataatcacactgcgtttctgatctgcaagtgcatctccaccagagagca
tgactgctcagagtgcatagcttacctaatgattgctattctgcacatgt
gtctatgcagtgatctcaaccttaatgcttagacctttaatatagtctcc
aatttggggtggatccccaacataaaataatcatactactaataacggaa
ttgctagttagtaaggatgtacggcatggagatattctgtatgtgaccta
aaggggcttgaccagggtaacaatcggatctcatggttctcattggacca
agtcatcaggtggtgttcgacgcttatattagtta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_90965091_90966185
seq2: B6Ng01-130D06.b_50_1135

seq1  GAATTCTGTATTTTCATCTTTTCTAACACCTATGAATCATCCCCTCAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTATTTTCATCTTTTCTAACACCTATGAATCATCCCCTCAATA  50

seq1  AGAACCTAGAAACACCAGTAATTTAAAGGTTTAAAACAATGGTATGAGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACCTAGAAACACCAGTAATTTAAAGGTTTAAAACAATGGTATGAGAC  100

seq1  ATTGAAATTTTAACATGTTAAATCACAATTCTTTGTGTTTGAGAAGGTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAAATTTTAACATGTTAAATCACAATTCTTTGTGTTTGAGAAGGTAA  150

seq1  GTGCCCAACTTGAGATCTATCCCATAGGCAAGAACCAATCCTTGACACTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCCAACTTGAGATCTATCCCATAGGCAAGAACCAATCCTTGACACTA  200

seq1  TTAATGATATTCTGTTATGCTATAGACAGGAGCCTAACATAACTGTTCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGATATTCTGTTATGCTATAGACAGGAGCCTAACATAACTGTTCTC  250

seq1  TGAGAGGCTCCAACCAGCAACTGACCTGAGCTCAGGAAGCCTTGTGGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGGCTCCAACCAGCAACTGACCTGAGCTCAGGAAGCCTTGTGGAAA  300

seq1  GGTTTGGGGAAGGATTGAGGGACCTGGAATGTATACCTACTCAATAAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTGGGGAAGGATTGAGGGACCTGGAATGTATACCTACTCAATAAGAA  350

seq1  GACCAACAGAATCTACTAACCTGGATCTTTGGAGGCTTCCAGAGACTGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAACAGAATCTACTAACCTGGATCTTTGGAGGCTTCCAGAGACTGAA  400

seq1  CCACCAAGCAACAAGCATACATGCACATATTTAGCATATGTGCAGCTTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCAAGCAACAAGCATACATGCACATATTTAGCATATGTGCAGCTTGG  450

seq1  TCTTCATTTGGGTCCTCCAACAACTGAAGCAGGGGTTGGCTGTCCCTGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCATTTGGGTCCTCCAACAACTGAAGCAGGGGTTGGCTGTCCCTGAC  500

seq1  TCTGCTGCGTACCTGTGGATCTTGTTCCCCTAACTGAGCTGCTTTGTATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTGCGTACCTGTGGATCTTGTTCCCCTAACTGAGCTGCTTTGTATG  550

seq1  GTGGCCTCAGTGGAAGAGGGTGTGCCTAGGACTGCAGTGACTTGATGTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCCTCAGTGGAAGAGGGTGTGCCTAGGACTGCAGTGACTTGATGTGC  600

seq1  TAGGGTGGAATGGTACCCAGCCCACACTTTTCTCAGAACAGAAGAGGCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGTGGAATGGTACCCAGCCCACACTTTTCTCAGAACAGAAGAGGCAG  650

seq1  AGATGGAAGAATGGAGAGAGGGACTGTGTGAGGGATTGGAACTAGGAGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGAAGAATGGAGAGAGGGACTGTGTGAGGGATTGGAACTAGGAGAA  700

seq1  TTGGGGGAGGGGCTGGGTTCCAGATGTAAAGTAAATAAATAAATTAATTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGGGAGGGGCTGGGTTCCAGATGTAAAGTAAATAAATAAATTAATTA  750

seq1  ATGGAACAAAAAAATATAAAGCAGACTAAGAGGAACCATCATCCATTCCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAACAAAAAAATATAAAGCAGACTAAGAGGAACCATCATCCATTCCA  800

seq1  GCTGTGTGATGAAGAGTTCTCATATGAGTCCCAAGGTTAGGAAGATTTCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGTGATGAAGAGTTCTCATATGAGTCCCAAGGTTAGGAAGATTTCA  850

seq1  GAGGACAGTTAGATTGTAGACTCTGGTGTTAATGATCAGCTCTTCCTTAT  900
      |||||||| ||||||||||||||||||| |||||||||||||||||||||
seq2  GAGGACAG-TAGATTGTAGACTCTGGTG-TAATGATCAGCTCTTCCTTAT  898

seq1  GAGGACATTAAAACATCAACGAGGGAGGCAGTAAACCTTCCAGTGACCTT  950
      || ||||||||||||||||||||||||||||||||||||||| |||||||
seq2  GA-GACATTAAAACATCAACGAGGGAGGCAGTAAACCTTCCATTGACCTT  947

seq1  GAAGACCATACAGTAATTCTAGTTTATTGTTTACCTGCATTTATACCTCC  1000
      |||||||||||||||| |||||||||||| ||||||||| ||||||||||
seq2  GAAGACCATACAGTAA-TCTAGTTTATTG-TTACCTGCA-TTATACCTCC  994

seq1  CCTGAAGTTTTTCTTAAAAGGAAGATTTGACTTCCTAAAGGTAGAGTCCA  1050
      |||||||||||||| |||||  ||||||||||| || |||||| |  |||
seq2  CCTGAAGTTTTTCTAAAAAG--AGATTTGACTT-CTTAAGGTAAATCCCA  1041

seq1  AGGTCAAACAGGCTATGAG--AGATCATGGGCAAGGTAATAAGTCTG  1095
      |||| ||||| ||||||||  | |||  |||||||||||||| ||||
seq2  AGGT-AAACAAGCTATGAGAAATATCTAGGGCAAGGTAATAA-TCTG  1086