BAC Information

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BAC

Clone NameB6Ng01-131D14
Chromosome4 (Build37)
Map Location 56,865,541 - 57,031,023
singlet/doubletdoublet
Overlap geneCtnnal1, D730040F13Rik, 6430704M03Rik, Epb4.1l4b
Upstream geneActl7b, Actl7a, Ikbkap, BC026590
Downstream genePtpn3, LOC100041460, 1700042G15Rik, LOC100041342, LOC619973, LOC667049, Palm2, LOC100041513, Akap2, D630039A03Rik, Txn1, Txndc8
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-131D14.bB6Ng01-131D14.g
ACCDH932335DH932336
length1,044734
definitionDH932335|Mus musculus domesticus DNA, BAC clone: B6Ng01-131D14, 5' end.DH932336|Mus musculus domesticus DNA, BAC clone: B6Ng01-131D14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(56,865,541 - 56,866,527)(57,030,291 - 57,031,023)
sequence
gaattccaaacaaataccttcaggtggtccgataggagctcactgcttag
agttctgcaaaacccaggctgaggcctccgtaagacttggtatctggtga
gggccacggcctcatgagtagtgctttctgggtcttacttggtagaagaa
gcaaacaagttccctcgggttccaccctaaagcattagtctcattcatga
tttaatcgcctcccaaaggcctcatttgttaccaacattaccatggggat
taagttccagtttaagaattgtgagaggaaaccaatattcagaccacaac
aagagtagtgtaagcaaaagcctactataaatcaatcaatcaatcaatca
ataagtggggaagggattaaggagacggctcagcaggtaaagtgtgtgaa
gacctgaatttgaattccagaacccacacaaagctgagtgcagtaaaaag
gacattcaaattctcaaaactgctatggaagatgggaagcagagacatag
gaatgtctcaaagatcatgggtcagctagcctagcccaccaaaaggcaaa
caaaaagactcagtcgcaaagaagaccaaaggtgaaaacagatgtccaag
cttatcctttgacctacacacacacacacacacacacacacacacacaca
cacaaaacagatatccaagcttatcctttgacctacacacacacacacac
acacacacacacacacacacactgtagcatatgcatgtacacattcacac
cccacacccacattgtatcatataacacacaatctctcacacacctttct
cctttctccagccctcacacacaggtttggggttttctttttaggtgaaa
aaaaaaaaaaaaaaacccccaaaaaaaaaaaaagcaactccttgaaaact
agagggaaagaatcttatcttttagttggcagagatcctccttatattaa
cacagaaaggtagaaatatcctctaagagttagtgggccggggctggaaa
aatggcttagctgtataaaagcatcgacttctcttccagaggtc
gaattctatagactgtatcctggaatgtttttgttttgttttgttttttg
gagttttgtttttgtttaaggtagagttttgctgcatagcaggctggtct
ggtacttaactattgtcttagtcagggtttctattcctgcacaaacatca
tgaccatgaagcaagttggggaggaaagggtttattcggcttacacttcc
atactgctgttcatcaccaaggaagtcaggactggaactcaagcaggtca
gaaagcaggagccgatgcagaggccatggagggatgttctttactggttt
gcctcccctggcttgctcagactgctctcttatagaacccaagactacca
gcccagagatggtcccacccacaaggggcctttcccccttgatcactaac
tgagaaaatgccttacagttggatctcatggaggcatttcctcaactgaa
gctcctttctctgtgataaccccagctgtgtcaagttgacacaaaactag
ccagtacaactatgaacccaggatggcttggaactcatgggaaatctgcc
ttagcctactgagtagtagggttatagacgtgagccaccatactggcttt
cactgcctggaatcaggactccgtcttacagtttgccaagtgggaggcag
gctcctttcatgtatcccacagatggttaaagaccaggctgcagtattag
agtgtggaatgatagctacagaattctccccaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_56865541_56866527
seq2: B6Ng01-131D14.b_99_1089

seq1  TCTGCAAAACCCAGGCTGAGGCCTCCGTAAGACTTGGTATCTGGTGAGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCAAAACCCAGGCTGAGGCCTCCGTAAGACTTGGTATCTGGTGAGGG  50

seq1  CCACGGCCTCATGAGTAGTGCTTTCTGGGTCTTACTTGGTAGAAGAAGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACGGCCTCATGAGTAGTGCTTTCTGGGTCTTACTTGGTAGAAGAAGCA  100

seq1  AACAAGTTCCCTCGGGTTCCACCCTAAAGCATTAGTCTCATTCATGATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGTTCCCTCGGGTTCCACCCTAAAGCATTAGTCTCATTCATGATTT  150

seq1  AATCGCCTCCCAAAGGCCTCATTTGTTACCAACATTACCATGGGGATTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCGCCTCCCAAAGGCCTCATTTGTTACCAACATTACCATGGGGATTAA  200

seq1  GTTCCAGTTTAAGAATTGTGAGAGGAAACCAATATTCAGACCACAACAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCAGTTTAAGAATTGTGAGAGGAAACCAATATTCAGACCACAACAAG  250

seq1  AGTAGTGTAAGCAAAAGCCTACTATAAATCAATCAATCAATCAATCAATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGTGTAAGCAAAAGCCTACTATAAATCAATCAATCAATCAATCAATA  300

seq1  AGTGGGGAAGGGATTAAGGAGACGGCTCAGCAGGTAAAGTGTGTGAAGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGGAAGGGATTAAGGAGACGGCTCAGCAGGTAAAGTGTGTGAAGAC  350

seq1  CTGAATTTGAATTCCAGAACCCACACAAAGCTGAGTGCAGTAAAAAGGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAATTTGAATTCCAGAACCCACACAAAGCTGAGTGCAGTAAAAAGGAC  400

seq1  ATTCAAATTCTCAAAACTGCTATGGAAGATGGGAAGCAGAGACATAGGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAATTCTCAAAACTGCTATGGAAGATGGGAAGCAGAGACATAGGAA  450

seq1  TGTCTCAAAGATCATGGGTCAGCTAGCCTAGCCCACCAAAAGGCAAACAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCAAAGATCATGGGTCAGCTAGCCTAGCCCACCAAAAGGCAAACAA  500

seq1  AAAGACTCAGTCGCAAAGAAGACCAAAGGTGAAAACAGATGTCCAAGCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACTCAGTCGCAAAGAAGACCAAAGGTGAAAACAGATGTCCAAGCTT  550

seq1  ATCCTTTGACCTACACACACACACACACACACACACACACACACACACAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTTGACCTACACACACACACACACACACACACACACACACACACAC  600

seq1  AAAACAGATATCCAAGCTTATCCTTTGACCTACACACACACACACACACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAGATATCCAAGCTTATCCTTTGACCTACACACACACACACACACA  650

seq1  CACACACACACACACACACTGTAGCATATGCATGTACACATTCACA-CCC  699
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CACACACACACACACACACTGTAGCATATGCATGTACACATTCACACCCC  700

seq1  ACACCCACATTGTATCATATAACACACAATCTCTCACACACCTTTCTCCT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCCACATTGTATCATATAACACACAATCTCTCACACACCTTTCTCCT  750

seq1  TTCTCCAGCCCTCACACACAGGTTTGGGGTTTTCTTTTTAGGTG-AAAAA  798
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TTCTCCAGCCCTCACACACAGGTTTGGGGTTTTCTTTTTAGGTGAAAAAA  800

seq1  AAAAAAAAAAAACCCCCAAAAAAAAAAAAAGCAACTCACTAGAAACTAGA  848
      |||||||||||||||||||||||||||||||||||||  |  ||||||||
seq2  AAAAAAAAAAAACCCCCAAAAAAAAAAAAAGCAACTCCTTGAAAACTAGA  850

seq1  GGGAAAGAATCCTTATTCTATAG-TGGCAGAAGATCACCCT--TAATAAC  895
      |||||||||| |||||  | ||| |||||| |||||  |||  || ||||
seq2  GGGAAAGAAT-CTTATCTTTTAGTTGGCAG-AGATCCTCCTTATATTAAC  898

seq1  ACAGAAA-GTAGAAAATATCCCTCAAGAGTTAGGTGGTCGGGGCTGGAGA  944
      ||||||| |||| ||||||||   |||||||||  || |||||||||| |
seq2  ACAGAAAGGTAG-AAATATCCTCTAAGAGTTAGTGGGCCGGGGCTGGAAA  947

seq1  GATGGCTCAGCGGT-TAAAAGCACCGACTGCTCTTCCAGAGGTC  987
       |||||| ||| || |||||||| ||||| ||||||||||||||
seq2  AATGGCTTAGCTGTATAAAAGCATCGACTTCTCTTCCAGAGGTC  991

seq1: chr4_57030291_57031023
seq2: B6Ng01-131D14.g_69_802 (reverse)

seq1  TTTGGGGAGAATTCTGTAGCTATCATTCCACACTCTAATACTGCAGCCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGGAGAATTCTGTAGCTATCATTCCACACTCTAATACTGCAGCCTG  50

seq1  GTCTTTAACCATCTGTGGGATACATGAAAGGAGCCTGCCTCCCACTTGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTAACCATCTGTGGGATACATGAAAGGAGCCTGCCTCCCACTTGGC  100

seq1  AAACTGTAAGACGGAGTCCTGATTCCAGGCAGTG-AAGCCAGTATGGTGG  149
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AAACTGTAAGACGGAGTCCTGATTCCAGGCAGTGAAAGCCAGTATGGTGG  150

seq1  CTCACGTCTATAACCCTACTACTCAGTAGGCTAAGGCAGATTTCCCATGA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACGTCTATAACCCTACTACTCAGTAGGCTAAGGCAGATTTCCCATGA  200

seq1  GTTCCAAGCCATCCTGGGTTCATAGTTGTACTGGCTAGTTTTGTGTCAAC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCAAGCCATCCTGGGTTCATAGTTGTACTGGCTAGTTTTGTGTCAAC  250

seq1  TTGACACAGCTGGGGTTATCACAGAGAAAGGAGCTTCAGTTGAGGAAATG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACACAGCTGGGGTTATCACAGAGAAAGGAGCTTCAGTTGAGGAAATG  300

seq1  CCTCCATGAGATCCAACTGTAAGGCATTTTCTCAGTTAGTGATCAAGGGG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCATGAGATCCAACTGTAAGGCATTTTCTCAGTTAGTGATCAAGGGG  350

seq1  GAAAGGCCCCTTGTGGGTGGGACCATCTCTGGGCTGGTAGTCTTGGGTTC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGCCCCTTGTGGGTGGGACCATCTCTGGGCTGGTAGTCTTGGGTTC  400

seq1  TATAAGAGAGCAGTCTGAGCAAGCCAGGGGAGGCAAACCAGTAAAGAACA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGAGAGCAGTCTGAGCAAGCCAGGGGAGGCAAACCAGTAAAGAACA  450

seq1  TCCCTCCATGGCCTCTGCATCGGCTCCTGCTTTCTGACCTGCTTGAGTTC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCCATGGCCTCTGCATCGGCTCCTGCTTTCTGACCTGCTTGAGTTC  500

seq1  CAGTCCTGACTTCCTTGGTGATGAACAGCAGTATGGAAGTGTAAGCCGAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCCTGACTTCCTTGGTGATGAACAGCAGTATGGAAGTGTAAGCCGAA  550

seq1  TAAACCCTTTCCTCCCCAACTTGCTTCTTGGTCATGATGTTTGTGCAGGA  599
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TAAACCCTTTCCTCCCCAACTTGCTTCATGGTCATGATGTTTGTGCAGGA  600

seq1  ATAGAAACCCTGACTAAGACAATAGTTAAGTACCAGACCAGCCTGCTATG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAACCCTGACTAAGACAATAGTTAAGTACCAGACCAGCCTGCTATG  650

seq1  CAGCAAAACTCTACCTTAAACAAAAACAAAACTCCAAAAAACAAAACAAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAAAACTCTACCTTAAACAAAAACAAAACTCCAAAAAACAAAACAAA  700

seq1  ACAAAAACATTCCAGGATACAGTCTATAGAATTC  733
      ||||||||||||||||||||||||||||||||||
seq2  ACAAAAACATTCCAGGATACAGTCTATAGAATTC  734