BAC Information

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BAC

Clone NameB6Ng01-131I06
Chromosome4 (Build37)
Map Location 11,502,745 - 11,503,877
singlet/doubletsinglet
Overlap geneE130016E03Rik
Upstream gene1700123O12Rik, LOC383991, LOC100039656, LOC545589, 2610301B20Rik, LOC383992, LOC100039746, Plekhf2, 2310030N02Rik, LOC546828, LOC666897, Trp53inp1, Ccne2, Ints8, Dpy19l4, Rbm35a, LOC634834, 1110037F02Rik, LOC100039847
Downstream geneLOC100039862, Gem, Cdh17, Ppm2c, Tmem67, C430048L16Rik, LOC230010, LOC623671, LOC100039958, Rbm12b, 6720467C03Rik, LOC545592
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-131I06.bB6Ng01-131I06.g
ACCDH932554DH932555
length1051,121
definitionDH932554|Mus musculus domesticus DNA, BAC clone: B6Ng01-131I06, 5' end.DH932555|Mus musculus domesticus DNA, BAC clone: B6Ng01-131I06, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
actatgtagtacaggttggccttaaacttaagttccagggtgctgagatt
gcaggagtgggccaatacttcagactcaaagaagttaattgtgtgtgtgt
gtgtg
gaattccttctctcatccctatggacaagcaggcatttctccacacatct
gcaccatactttctatatctcccctgttttctcactgttaggaacataat
tttgtgcagcttggaataatgtagtgtttgcaagacaggagccaatgaga
ggcagctcaaatgtgtgccaaacccaaagcaggtgttgatatgctaatta
gctaggtaaggggtggcagtgataggctaatgatccctgactacaggaaa
ggaatgcccaatctagcagtgaccctaggaagcactactgtgctcctact
gtgctcctgagacaaggcatctcaacccttaagacggtgacagaaaagcc
aaggattaagggttaactagtgcctgttctaagttactgtgtattgtgta
aaaatggtttttcaggctatgtatgccttctgcaagactccagttcacaa
gcagcttctcactcaatcttgaaagtggaaaaacctgcattcctgatatc
tctggggtcaagctccacaaaaacaaataataaaaagatcaaatgaatga
caagaaaagacagtataaaacagagttgtgtcaggtttggtggcacatac
tacagccctagcagtgacatagatggatcaaaacttcaagaccagctcag
gctaaacagtgagatcctgtctcaaatttttaaaatgaaatactgaagct
ggaagaaatggtacacacctgtaattcaagcactttgggaacccgagaca
gggagattacaagtcggagacttcgtgaaaaagtaaataaattaaagagc
aaggtttaggagtctttgtgctcacagataagtaagcactaggggattaa
acacagagttgtctttggtccccaagaaaggctgggacaaaaggtggtta
atagcctggtgacctttgtgctgaaaggacaccagactgccccagtccct
tatctggagttgtttgcctcagtcaatctatgaggctatcttccccaagc
cccttttctcgggctgctgttcagtacaaagaaatgtttttacagagatt
gtcgtgtgctgtgcgtgcatacacttaaatgaactcctcggatctgacga
cctgctactgaacagtcgaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_11502745_11503877
seq2: B6Ng01-131I06.g_66_1186 (reverse)

seq1  GTTCGACCTGTCTCAGTAGCCAGTGTTCGTGCAGATCCCGAGAGTTCATT  50
      |||||| |||| ||||||||    | |||| |||||||   ||||||| |
seq2  GTTCGA-CTGT-TCAGTAGC---AGGTCGT-CAGATCCGAGGAGTTCA-T  43

seq1  TTAGGTGTATGCACGCACAGCACAACGACATCTTCTGTAAAATAGGTTCT  100
      ||| ||||||||||||||||||| ||||||   |||||||||    ||||
seq2  TTAAGTGTATGCACGCACAGCAC-ACGACAATCTCTGTAAAAACATTTCT  92

seq1  GTGTTAACTGAACAAGCAGCCCGGAGATAGGGGCCTGGGGGAAGATAGCC  150
       |||  ||||||| |||||||| |||| | ||| || |||||||||||||
seq2  TTGT--ACTGAAC-AGCAGCCC-GAGAAAAGGGGCTTGGGGAAGATAGCC  138

seq1  TCATAGATTGACTGAGGCAAACAAACTCCAGATAAGGGACTGGGGCAGTC  200
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TCATAGATTGACTGAGGCAAAC-AACTCCAGATAAGGGACTGGGGCAGTC  187

seq1  TGGTGTCCTTTCAGCACAAAGGTCACCAGGCTATTAACCACCTTTGGTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TGGTGTCCTTTCAGCACAAAGGTCACCAGGCTATTAACCACCTTTTGTCC  237

seq1  CAGCC-TTCTTGGGGACCAAAGACAACTCTGTGTTTAATCCCCTAGTGCT  299
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTTTCTTGGGGACCAAAGACAACTCTGTGTTTAATCCCCTAGTGCT  287

seq1  TACTTATCTGTGAGCACAAAGACTCCTAAACCTTGCTCTTTAATTTATTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTATCTGTGAGCACAAAGACTCCTAAACCTTGCTCTTTAATTTATTT  337

seq1  ACTTTTTCACGAAGTCTCCGACTTGTAATCTCCCTGTCTCGGGTTCCCAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTTCACGAAGTCTCCGACTTGTAATCTCCCTGTCTCGGGTTCCCAA  387

seq1  AGTGCTTGAATTACAGGTGTGTACCATTTCTTCCAGCTTCAGTATTTCAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTTGAATTACAGGTGTGTACCATTTCTTCCAGCTTCAGTATTTCAT  437

seq1  TTTAAAAATTTGAGACAGGATCTCACTGTTTAGCCTGAGCTGGTCTTGAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAAATTTGAGACAGGATCTCACTGTTTAGCCTGAGCTGGTCTTGAA  487

seq1  GTTTTGATCCATCTATGTCACTGCTAGGGCTGTAGTATGTGCCACCAAAC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGATCCATCTATGTCACTGCTAGGGCTGTAGTATGTGCCACCAAAC  537

seq1  CTGACACAACTCTGTTTTATACTGTCTTTTCTTGTCATTCATTTGATCTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACACAACTCTGTTTTATACTGTCTTTTCTTGTCATTCATTTGATCTT  587

seq1  TTTATTATTTGTTTTTGTGGAGCTTGACCCCAGAGATATCAGGAATGCAG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTATTTGTTTTTGTGGAGCTTGACCCCAGAGATATCAGGAATGCAG  637

seq1  GTTTTTCCACTTTCAAGATTGAGTGAGAAGCTGCTTGTGAACTGGAGTCT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTCCACTTTCAAGATTGAGTGAGAAGCTGCTTGTGAACTGGAGTCT  687

seq1  TGCAGAAGGCATACATAGCCTGAAAAACCATTTTTACACAATACACAGTA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAAGGCATACATAGCCTGAAAAACCATTTTTACACAATACACAGTA  737

seq1  ACTTAGAACAGGCACTAGTTAACCCTTAATCCTTGGCTTTTCTGTCACCG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAGAACAGGCACTAGTTAACCCTTAATCCTTGGCTTTTCTGTCACCG  787

seq1  TCTTAAGGGTTGAGATGCCTTGTCTCAGGAGCACAGTAGGAGCACAGTAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAAGGGTTGAGATGCCTTGTCTCAGGAGCACAGTAGGAGCACAGTAG  837

seq1  TGCTTCCTAGGGTCACTGCTAGATTGGGCATTCCTTTCCTGTAGTCAGGG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCCTAGGGTCACTGCTAGATTGGGCATTCCTTTCCTGTAGTCAGGG  887

seq1  ATCATTAGCCTATCACTGCCACCCCTTACCTAGCTAATTAGCATATCAAC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTAGCCTATCACTGCCACCCCTTACCTAGCTAATTAGCATATCAAC  937

seq1  ACCTGCTTTGGGTTTGGCACACATTTGAGCTGCCTCTCATTGGCTCCTGT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGCTTTGGGTTTGGCACACATTTGAGCTGCCTCTCATTGGCTCCTGT  987

seq1  CTTGCAAACACTACATTATTCCAAGCTGCACAAAATTATGTTCCTAACAG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCAAACACTACATTATTCCAAGCTGCACAAAATTATGTTCCTAACAG  1037

seq1  TGAGAAAACAGGGGAGATATAGAAAGTATGGTGCAGATGTGTGGAGAAAT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAAACAGGGGAGATATAGAAAGTATGGTGCAGATGTGTGGAGAAAT  1087

seq1  GCCTGCTTGTCCATAGGGATGAGAGAAGGAATTC  1133
      ||||||||||||||||||||||||||||||||||
seq2  GCCTGCTTGTCCATAGGGATGAGAGAAGGAATTC  1121