BAC Information

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BAC

Clone NameB6Ng01-132D21
Chromosome4 (Build37)
Map Location 81,853,672 - 81,997,406
singlet/doubletdoublet
Overlap geneNfib
Upstream geneMpdz, LOC100040131, LOC100040144, EG668895, LOC100040164, EG545641
Downstream geneZdhhc21, Cer1, Frem1, LOC667985, 1810054D07Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-132D21.bB6Ng01-132D21.g
ACCDH933094DH933095
length8351,163
definitionDH933094|Mus musculus domesticus DNA, BAC clone: B6Ng01-132D21, 5' end.DH933095|Mus musculus domesticus DNA, BAC clone: B6Ng01-132D21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(81,853,672 - 81,854,664)(81,996,223 - 81,997,406)
sequence
gaattcttctctgatccccttagcaacatcactaagcaggctcagaattt
tataactttaatgaatctgaaaaggaggttcagaaaagtcaagtgacagc
tcatatttacaaggcagataaaaattcaatattaaaataagcgttgattt
caccatgattcctactgtggatatagaacgtgtgcatgggcatatgtgtt
taaacagttggtccccagtgggtgtgctgtttgggaaagttgtagaacct
tgtagggggtcacagtgcagaaattgggtcattggggagtggggagatcc
cagcctgagttacagcatgagatcttggctttccagttacctgagatatg
agtaagatgcattagtaaatcctacatggaggactgtgctgccctccact
atgtcttccttgataaaatctccagggacactagcatttagacagcctag
gaagtgtgaccatcagaggactcaagttttgagtagtgtggagataaatg
gggctggggtaaatggtatgaaattcacaaagaatcaataaaaaggtaaa
ataaaaataagaatatcagacttgcaacctaaaatatggaaatatgggcc
aggatttttttattattattaagaagcagatggaagacatttgaggtaac
agaaatgaagatctggtggaaccttagaagtgggtttgtaagggtctgtg
attcacgaagaatgagagcccagactcaaatagtatgtaatagcagagca
tttattctgcagagaacttgcatgcaggaatctaccatacatcaagatgg
aagacagaggtgtggactttacagggtcaaagtaa
gaattcttttagtgaagaggagtattcattgaagagtcaatcattagctg
ttcactggggtgttggttggagcacaccaaagtaaagtgtcccaaactat
cactataacttttagtctttgcagtagatatccacttttcttcataataa
gtcatgttattccattcaagtataatggaattttcttgaagtatacctct
tgatttgtcagtaatcatttttcatggttgatcttaagaataaaggaccc
gtaactcagtctctttaaggaagatcatggtatacttacttataactagt
aaacttctagaaccggttgtcatgttattaattacaaggtcagcattaat
aattaatatttaataagtatcttcttcaactgcaagccatttagctgaga
gctttataggtattagctcacttcatcttctcaaccaaactctttaaact
aggttttattatttccaccttacaggtgattaactgagcttagccaggtt
gaggtacctgctactggagctaataaatggcaggccaaacatgggattcc
tgaaccttttcactgcccagctccagtgcctttatctccaaactaacaac
acagtttggcactgtctgtggctgtgttgtgcagtgaacagtattaatat
caaaaacataagataagtcagtgcatcttagcaaaatttgtacattagca
gaaaagacacacttgagaattcactttcagtgactaagtttccctgaaaa
aaaatttgaatagataactctagcaaacagttttgttaagtgggcagatg
gaggtggtgcacacggaagatacagaatatatgctattgcaaatgtccac
tattcccatggatgtctggaatacccaccattctttcatttaattcttta
acttggatttatggaagttatttttcattttaaaacaaatgcacatcttc
ccagaaatgccattatgtcatcatattatatttacagcaaagacccaaac
tatatctatgatgaaaatggagcagttctacaggaagacttttacccctc
ttcaattcacagctgctgaagtcgaacatggcatgaacgagatcaggttg
tacagaagagcttcaagaggcttggaactcacagcactgcttattgccat
gtgcccttagtca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_81853672_81854664
seq2: B6Ng01-132D21.b_50_884

seq1  GAATTCTTCTCTGATCCCCTTAGCAACATCACTAAGCAGGCTCAGAATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTCTGATCCCCTTAGCAACATCACTAAGCAGGCTCAGAATTT  50

seq1  TATAACTTTAATGAATCTGAAAAGGAGGTTCAGAAAAGTCAAGTGACAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAACTTTAATGAATCTGAAAAGGAGGTTCAGAAAAGTCAAGTGACAGC  100

seq1  TCATATTTACAAGGCAGATAAAAATTCAATATTAAAATAAGCGTTGATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATTTACAAGGCAGATAAAAATTCAATATTAAAATAAGCGTTGATTT  150

seq1  CACCATGATTCCTACTGTGGATATAGAACGTGTGCATGGGCATATGTGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATGATTCCTACTGTGGATATAGAACGTGTGCATGGGCATATGTGTT  200

seq1  TAAACAGTTGGTCCCCAGTGGGTGTGCTGTTTGGGAAAGTTGTAGAACCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACAGTTGGTCCCCAGTGGGTGTGCTGTTTGGGAAAGTTGTAGAACCT  250

seq1  TGTAGGGGGTCACAGTGCAGAAATTGGGTCATTGGGGAGTGGGGAGATCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGGGGGTCACAGTGCAGAAATTGGGTCATTGGGGAGTGGGGAGATCC  300

seq1  CAGCCTGAGTTACAGCATGAGATCTTGGCTTTCCAGTTACCTGAGATATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTGAGTTACAGCATGAGATCTTGGCTTTCCAGTTACCTGAGATATG  350

seq1  AGTAAGATGCATTAGTAAATCCTACATGGAGGACTGTGCTGCCCTCCACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAGATGCATTAGTAAATCCTACATGGAGGACTGTGCTGCCCTCCACT  400

seq1  ATGTCTTCCTTGATAAAATCTCCAGGGACACTAGCATTTAGACAGCCTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTTCCTTGATAAAATCTCCAGGGACACTAGCATTTAGACAGCCTAG  450

seq1  GAAGTGTGACCATCAGAGGACTCAAGTTTTGAGTAGTGTGGAGATAAATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGTGACCATCAGAGGACTCAAGTTTTGAGTAGTGTGGAGATAAATG  500

seq1  GGGCTGGGGTAAATGGTATGAAATTCACAAAGAATCAATAAAAAGGTAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTGGGGTAAATGGTATGAAATTCACAAAGAATCAATAAAAAGGTAAA  550

seq1  ATAAAAATAAGAATATCAGACTTGCAACCTAAAATATGGAAATATGGGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAATAAGAATATCAGACTTGCAACCTAAAATATGGAAATATGGGCC  600

seq1  AGGATTTTTTTATTATTATTAAGAAGCAGATGGAAGACATTTGAGGTAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTTTTTTATTATTATTAAGAAGCAGATGGAAGACATTTGAGGTAAC  650

seq1  AGAAATGAAGATCTGGTGGAACCTTAGAAGTGGGTTTGTAAGGGTCTGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATGAAGATCTGGTGGAACCTTAGAAGTGGGTTTGTAAGGGTCTGTG  700

seq1  ATTCACGAAGAATGAGAGCCCAGACTCAAATAGTATGTAATAGCAAGAGC  750
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  ATTCACGAAGAATGAGAGCCCAGACTCAAATAGTATGTAATAGC-AGAGC  749

seq1  ATTTATTCTGCAGAGAACTTGCATGCAGGAATCTACCATACATCAGGATG  800
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  ATTTATTCTGCAGAGAACTTGCATGCAGGAATCTACCATACATCAAGATG  799

seq1  GAAGACAGAGGTGTGGACTTTACAGGGTCAATGTAAAGCCTGTTAGGCTA  850
      ||||||||||||||||||||||||||||||| ||||              
seq2  GAAGACAGAGGTGTGGACTTTACAGGGTCAAAGTAA--------------  835

seq1  GGAATGGGCAACTTTTACCTTCCTTTTCCTTGATTGGTTAGCTCTGTCTC  900
                                                        
seq2  --------------------------------------------------  835

seq1  CAAGGGTATGGATACCTGTGTGATTGGTTAAGGCTCTGAGGAATTTTGGG  950
                                                        
seq2  --------------------------------------------------  835

seq1  GACTTTAGCTGATTAACTATACTTGGTTCAAGCTCGGTAGTAA  993
                                                 
seq2  -------------------------------------------  835

seq1: chr4_81996223_81997406
seq2: B6Ng01-132D21.g_66_1228 (reverse)

seq1  TGACTAAGTGCAACAT-GCAATAAGCAGTGCTGTAGACTCCAGTGCTACT  49
      |||||||| || |||| ||||||||||||||||| || | |   ||  ||
seq2  TGACTAAGGGC-ACATGGCAATAAGCAGTGCTGT-GAGTTCCAAGCCTCT  48

seq1  TGGAAGGCTC-TCTGTACCCACCTTGATCTCGTTCATGCCATGTTCGACT  98
      ||  | |||| ||||||  || | ||||||||||||||||||||||||||
seq2  TG--AAGCTCTTCTGTA--CAACCTGATCTCGTTCATGCCATGTTCGACT  94

seq1  TCCAGCAGCTGGTGAATTTGGAGAGGGGTAAAAGTC-TCCTGTAGGACTT  147
      | |||||||| ||||| ||| ||||||||||||||| |||||||| ||| 
seq2  T-CAGCAGCT-GTGAA-TTGAAGAGGGGTAAAAGTCTTCCTGTAGAACT-  140

seq1  GGCTCCATATTTTCATCTATAGATATAGTTTTGGGTCTTTTGCTGTTAAA  197
       |||||  ||||||||| |||||||||| |||||||| ||||||||  ||
seq2  -GCTCC--ATTTTCATC-ATAGATATAG-TTTGGGTC-TTTGCTGT--AA  182

seq1  ATATAATAATGATGACATTAATGGCATTTCTGGGAAGATTGTGGCATTTG  247
      ||||||| ||||||||| |||||||||||||||||||| ||| |||||||
seq2  ATATAAT-ATGATGACA-TAATGGCATTTCTGGGAAGA-TGT-GCATTTG  228

seq1  TTTTTAAAATGAAAAATAACTTCCATAAATCCAAGTTAAAGAATTAAATT  297
       ||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  -TTTTAAAATGAAAAATAACTTCCATAAATCCAAGTTAAAGAATTAAA-T  276

seq1  GAAAGAATGGTGGGTATTCCAGACATCCATGGGAATAGTGGACATTTGCA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAATGGTGGGTATTCCAGACATCCATGGGAATAGTGGACATTTGCA  326

seq1  ATAGCATATATTCTGTATCTTCCGTGTGCACCACCTCCATCTGCCCACTT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCATATATTCTGTATCTTCCGTGTGCACCACCTCCATCTGCCCACTT  376

seq1  AACAAAACTGTTTGCTAGAGTTATCTATTCAAATTTTTTTTCAGGGAAAC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAACTGTTTGCTAGAGTTATCTATTCAAATTTTTTTTCAGGGAAAC  426

seq1  TTAGTCACTGAAAGTGAATTCTCAAGTGTGTCTTTTCTGCTAATGTACAA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTCACTGAAAGTGAATTCTCAAGTGTGTCTTTTCTGCTAATGTACAA  476

seq1  ATTTTGCTAAGATGCACTGACTTATCTTATGTTTTTGATATTAATACTGT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGCTAAGATGCACTGACTTATCTTATGTTTTTGATATTAATACTGT  526

seq1  TCACTGCACAACACAGCCACAGACAGTGCCAAACTGTGTTGTTAGTTTGG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGCACAACACAGCCACAGACAGTGCCAAACTGTGTTGTTAGTTTGG  576

seq1  AGATAAAGGCACTGGAGCTGGGCAGTGAAAAGGTTCAGGAATCCCATGTT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAAAGGCACTGGAGCTGGGCAGTGAAAAGGTTCAGGAATCCCATGTT  626

seq1  TGGCCTGCCATTTATTAGCTCCAGTAGCAGGTACCTCAACCTGGCTAAGC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCTGCCATTTATTAGCTCCAGTAGCAGGTACCTCAACCTGGCTAAGC  676

seq1  TCAGTTAATCACCTGTAAGGTGGAAATAATAAAACCTAGTTTAAAGAGTT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTAATCACCTGTAAGGTGGAAATAATAAAACCTAGTTTAAAGAGTT  726

seq1  TGGTTGAGAAGATGAAGTGAGCTAATACCTATAAAGCTCTCAGCTAAATG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGAGAAGATGAAGTGAGCTAATACCTATAAAGCTCTCAGCTAAATG  776

seq1  GCTTGCAGTTGAAGAAGATACTTATTAAATATTAATTATTAATGCTGACC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGCAGTTGAAGAAGATACTTATTAAATATTAATTATTAATGCTGACC  826

seq1  TTGTAATTAATAACATGACAACCGGTTCTAGAAGTTTACTAGTTATAAGT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAATTAATAACATGACAACCGGTTCTAGAAGTTTACTAGTTATAAGT  876

seq1  AAGTATACCATGATCTTCCTTAAAGAGACTGAGTTACGGGTCCTTTATTC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATACCATGATCTTCCTTAAAGAGACTGAGTTACGGGTCCTTTATTC  926

seq1  TTAAGATCAACCATGAAAAATGATTACTGACAAATCAAGAGGTATACTTC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGATCAACCATGAAAAATGATTACTGACAAATCAAGAGGTATACTTC  976

seq1  AAGAAAATTCCATTATACTTGAATGGAATAACATGACTTATTATGAAGAA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAATTCCATTATACTTGAATGGAATAACATGACTTATTATGAAGAA  1026

seq1  AAGTGGATATCTACTGCAAAGACTAAAAGTTATAGTGATAGTTTGGGACA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGATATCTACTGCAAAGACTAAAAGTTATAGTGATAGTTTGGGACA  1076

seq1  CTTTACTTTGGTGTGCTCCAACCAACACCCCAGTGAACAGCTAATGATTG  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACTTTGGTGTGCTCCAACCAACACCCCAGTGAACAGCTAATGATTG  1126

seq1  ACTCTTCAATGAATACTCCTCTTCACTAAAAGAATTC  1184
      |||||||||||||||||||||||||||||||||||||
seq2  ACTCTTCAATGAATACTCCTCTTCACTAAAAGAATTC  1163