BAC Information

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BAC

Clone NameB6Ng01-132I24
Chromosome4 (Build37)
Map Location 38,184,700 - 38,185,663
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC621458, LOC277771
Downstream geneLOC100039448, LOC665520, LOC100039487
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-132I24.bB6Ng01-132I24.g
ACCDH933334DH933335
length1,226963
definitionDH933334|Mus musculus domesticus DNA, BAC clone: B6Ng01-132I24, 5' end.DH933335|Mus musculus domesticus DNA, BAC clone: B6Ng01-132I24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaggcaactagggtgaggatcttatacccacacctacagtgaca
cacccattccaaccaggtcacatatattccaacaaggccataccttcaga
tggtgccactccctggtccaaggatatacaaaccataacattccactccc
tggtccccatagacttgttaaaaaacatgagtctatgggggccatactta
aacatagtataatgcaaaatgcatttagtccaacttttaaagtcctcata
gtctataacagttgcaacaatgttaaaagtccaaagttcaaggtctcttc
tgagattcattcaacttaattaactgtaatcaccaaagcaaggcaggaaa
caagctgggcaaattccaaactctgcatctccatggctgatgtcaaagca
gtctttagatctccactcctttttcatctttgttgactgcaacaaactgt
tttctcctgggctggttccactccctgttagcagctttcctcagcatgta
tcccatggctctggcatctctaacatctttgagtctccacagcaatttca
atgttacagcttcttgtttcagtgtcttggattccacttgatcttttgga
ctcctcctacgggctggcatcactttcccagctctgtcctctgtagcact
ctaagctcaggttgatccactccactatggctgctgttcttggtgatcat
cccatggtactgatatctccaatacactcaggtgttccactccaactagg
cttcaccaatagcctctcataggctctcttcagagtgccaagcctcaaat
cctttgcatgaccccttcagccctgggccatcaactacagctgaggcttc
accttctccaatggctttccctggcctctcacagtgctaagcctcagctt
ctctcatgatcccttcattccttcacaagcagtaccacctgagtaactct
tacacattattaagtccagcagcagcatgacatacaacctcgggtatcta
gacacagcttcttgtgctccagaaacatttccagagatttcacctcacga
tgctgtctctttcttatcactgctattcttagcttcagctacagcatcaa
ttttcccagtagttcatcatctatctagagcgagcacttggctgaactgc
ggagtcgtggcttacgactgaccgatccttacatcatatgcaatagctta
tgtttctaaacttacatgctagcact
gaattccaacaaattctgaatataaagagatcagggggttttacactgat
gcttacctaaatggttaaagggtcttcatatattatgcaaatattctata
tcaaatagtctcgtcctagtatatgcacagaaatggtaaacatggttaca
tcatcactgtattagatatccttgatatgagaaaaatatcacctcaaata
tagtgagaacacagagctacaatgaaaatccttatctaaaatatactaaa
gtataaacagtgcctatatatagcctgtactatataattttgtgttacct
gctcaaaatggatatgaatgtactaagtgttgtctgaaaacagacaataa
tttttaaaggtaatttgactttctcatttttaagaaaaataatcaatact
atcccatgcaaactctcctttgtagattataatattctttaatggtctcc
attatagctacactcatcttatagtttccctgacaacattatttactcca
ggactatttgcatttcaaaagaacacatctgtggcaggcactgcatgaca
caaagaaacaaatcactacatatttagagtgagacagatatatttgtgtg
tatttccatatggccaagacttcaggcaaatatgacaaaattggttttgt
cacacttctcacatcctcctttaaaattgttccatcttcatgtagttatt
ttggaacttcaaagtgctatagggcaggaagtcagtggctgacagggtat
gttaaaattctgactgctaccttctcacccttgtagtgtttgattccact
aaaccttgggatatgataaatactttcgtttctgttatatccatggagat
tatgacctgttaaaaagataaacaataaaacatttctgtcagtgtctctg
tctctctgtctctgtctctctatatctctgtctgtctgtatgtatatata
tgtgtgtgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_38184700_38185663
seq2: B6Ng01-132I24.g_68_1030 (reverse)

seq1  ACACACACACACATATATATACATACAGACAGACAGAGATATAGAGAGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACATATATATACATACAGACAGACAGAGATATAGAGAGAC  50

seq1  AGAGACAGAGAGACAGAGACACTGACAGAAATGTTTTATTGTTTTATCTT  100
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AGAGACAGAGAGACAGAGACACTGACAGAAATGTTTTATTG-TTTATCTT  99

seq1  TTTAACAGGTCATAATCTCCATGGATATAACAGAAACGAAAGTATTTATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACAGGTCATAATCTCCATGGATATAACAGAAACGAAAGTATTTATC  149

seq1  ATATCCCAAGGTTTAGTGGAATCAAACACTACAAGGGTGAGAAGGTAGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCCCAAGGTTTAGTGGAATCAAACACTACAAGGGTGAGAAGGTAGCA  199

seq1  GTCAGAATTTTAACATACCCTGTCAGCCACTGACTTCCTGCCCTATAGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGAATTTTAACATACCCTGTCAGCCACTGACTTCCTGCCCTATAGCA  249

seq1  CTTTGAAGTTCCAAAATAACTACATGAAGATGGAACAATTTTAAAGGAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAAGTTCCAAAATAACTACATGAAGATGGAACAATTTTAAAGGAGG  299

seq1  ATGTGAGAAGTGTGACAAAACCAATTTTGTCATATTTGCCTGAAGTCTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGAGAAGTGTGACAAAACCAATTTTGTCATATTTGCCTGAAGTCTTG  349

seq1  GCCATATGGAAATACACACAAATATATCTGTCTCACTCTAAATATGTAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATATGGAAATACACACAAATATATCTGTCTCACTCTAAATATGTAGT  399

seq1  GATTTGTTTCTTTGTGTCATGCAGTGCCTGCCACAGATGTGTTCTTTTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGTTTCTTTGTGTCATGCAGTGCCTGCCACAGATGTGTTCTTTTGA  449

seq1  AATGCAAATAGTCCTGGAGTAAATAATGTTGTCAGGGAAACTATAAGATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCAAATAGTCCTGGAGTAAATAATGTTGTCAGGGAAACTATAAGATG  499

seq1  AGTGTAGCTATAATGGAGACCATTAAAGAATATTATAATCTACAAAGGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTAGCTATAATGGAGACCATTAAAGAATATTATAATCTACAAAGGAG  549

seq1  AGTTTGCATGGGATAGTATTGATTATTTTTCTTAAAAATGAGAAAGTCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGCATGGGATAGTATTGATTATTTTTCTTAAAAATGAGAAAGTCAA  599

seq1  ATTACCTTTAAAAATTATTGTCTGTTTTCAGACAACACTTAGTACATTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACCTTTAAAAATTATTGTCTGTTTTCAGACAACACTTAGTACATTCA  649

seq1  TATCCATTTTGAGCAGGTAACACAAAATTATATAGTACAGGCTATATATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCATTTTGAGCAGGTAACACAAAATTATATAGTACAGGCTATATATA  699

seq1  GGCACTGTTTATACTTTAGTATATTTTAGATAAGGATTTTCATTGTAGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACTGTTTATACTTTAGTATATTTTAGATAAGGATTTTCATTGTAGCT  749

seq1  CTGTGTTCTCACTATATTTGAGGTGATATTTTTCTCATATCAAGGATATC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTTCTCACTATATTTGAGGTGATATTTTTCTCATATCAAGGATATC  799

seq1  TAATACAGTGATGATGTAACCATGTTTACCATTTCTGTGCATATACTAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATACAGTGATGATGTAACCATGTTTACCATTTCTGTGCATATACTAGG  849

seq1  ACGAGACTATTTGATATAGAATATTTGCATAATATATGAAGACCCTTTAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAGACTATTTGATATAGAATATTTGCATAATATATGAAGACCCTTTAA  899

seq1  CCATTTAGGTAAGCATCAGTGTAAAACCCCCTGATCTCTTTATATTCAGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTAGGTAAGCATCAGTGTAAAACCCCCTGATCTCTTTATATTCAGA  949

seq1  ATTTGTTGGAATTC  964
      ||||||||||||||
seq2  ATTTGTTGGAATTC  963