BAC Information

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BAC

Clone NameB6Ng01-132M19
Chromosome4 (Build37)
Map Location 155,273,096 - 155,390,839
singlet/doubletdoublet
Overlap geneCentb5, Ube2j2, C1qdc2, B3galt6, Sdf4, LOC100043436, Tnfrsf4
Upstream gene2810405K02Rik, Tnfrsf14, Hes5, Pank4, LOC100043358, Plch2, Pex10, Rer1, Morn1, Ski, 2610002J02Rik, Prkcz, Gabrd, 2010015L04Rik, Tmem52, Gnb1, Nadk, A530082C11Rik, Cdc2l1, Mmp23, Mib2, B930041F14Rik, Ssu72, EG381582, Atad3a, Vwa1, A230069A22Rik, E230028L10Rik, Mrpl20, Ccnl2, Aurkaip1, Mxra8, Dvl1, Tas1r3, BC002216, Cpsf3l, Pusl1
Downstream geneTnfrsf18, Ttll10, 9430015G10Rik, EG667357, Agrn, LOC100038882, AW011738, LOC677185, 2310042D19Rik, Plekhn1, Klhl17, LOC100042378
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-132M19.bB6Ng01-132M19.g
ACCDH933511DH933512
length1,132893
definitionDH933511|Mus musculus domesticus DNA, BAC clone: B6Ng01-132M19, 5' end.DH933512|Mus musculus domesticus DNA, BAC clone: B6Ng01-132M19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(155,389,683 - 155,390,839)(155,273,096 - 155,273,988)
sequence
gaattccatacccgtactcacactggagtacatgtgaccaagtgtaggtc
tctgagtggaccttcattttggccccaaaccctccccaaccagaatagga
ggccacctcagccctagtgccagtcacagactcacagctgctagcatgtt
tattaggagcaccaccaggcaggtagtatgcatagcatacataggaaagc
ccagagccagcccagcacctagaacggtgtggagggtactggcaggcatc
aggatatgggttgtccgtgccccataaaatccactcctgtagtaatgctc
agatcttggccagagtaaagtgtgcgtctgtgtgttcctcctggatcggg
gtcctgaagctgtttccccctaagagaagcacagaaggaaagagcagtga
ggagctatggctcatcgtgaaggaggtaggctttactgagcccaatgtga
tactcacaacaaggtttgggagtgttaggcaatctccaagccttccggag
caggtacaaggccagcaggacagtcaagggagccagcaggcccaggccca
ggcctaggagaacagcaaatgcagggcctatgaggagaggccaactgagt
aaactcgctcacccttgagttctctccctatcctccactgcgccagtgtc
ccttaccctcaggagtcaccaaggtgggtggagagggcaactcagaagtc
ctgggccagactgtggtggattggacagtggttggcctgaatgtagggcg
ctgggtctcccagagcagtgtggccaggaggcttctgtcctcacagactg
cgtccaagctgtcactggctgggtggcgggtctgctttccagataaggta
caactgtgggacgagacagtgttggaagttgcactgagccatcttcagtt
ctgccaagacttccacccacaggcagtacctatgtctgcgtctgtctcac
cctgtttcatcctggctgctctggctgggttctgccctttcaaccctacc
ctatacttctgtagcccctgagagactacatttgagaacaacatgttcct
gggcttggctggattctcaatgacctctcaattgcaggcccctggcaagt
aggctgggttggtttctgatgtcagcaatgtc
gaattccatattccatcttcaggataagaagggcagcaggtccttggcca
aggattcaagctgtcaggggcctttgccctctgacaggaggttcaaccaa
caggggcaaagacagggagatgggatggacaggcccgggtaaagttgtag
tttatccccataccctagaggagatgcaggctggctgacgtttggcacat
gaactggagtctagagtagaccggctggggagggggctgggggtcctaga
gcagggaagagggaagaacatgtttgtttggtagagtccagaaggggaga
aggaaaacgaccgtgctcaggagccacggaggggatgtggtaagagagag
agggcccagaatatctaaaacataccatgcactccttttctgacctctga
ttcttggcatctatattggctggcacccagggatgtgcggaagttcaaag
agacaaagaagcagtttgacaaagtgcgggaggacatggagttgtccttg
gtgaggaatgcccaagccccaaggcaccggccccatgaagtagaggaggc
cacaggtgccctcactgtcacccggaagtgcttccgccacttggcgctgg
actatgtgctgcaggtcagctgcggggcagcagagatgtgacttgtccaa
tgggtaggggtgacacccagcaaagcctggaggtagggtagtcagtgggg
gcagaggcttttgatgtatacaagaggcccctaggggtatggggctagaa
ttcttggtttcatccagatcatgtctcatattcagacaagaggaaaggct
gtgaattagctatcccagcctccttcttccttaggattttttctgtgata
cctgcaagaccaaaactactggggattttggaactattagcgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_155389683_155390839
seq2: B6Ng01-132M19.b_47_1178 (reverse)

seq1  GACAT--CTGACATCACGAACACCAACACAGGCTCTACTGTGCAAGGGGC  48
      |||||  ||||||||| ||| |||||| |||   ||||| ||| ||||| 
seq2  GACATTGCTGACATCA-GAA-ACCAACCCAG--CCTACT-TGCCAGGGG-  44

seq1  CCCTGCAGATTGAGAGGGGCATGTGAGATCCAAGCCCAGGCCCAGGGACA  98
       |||||| ||||||| || ||| |||||  | || ||| ||||||| |||
seq2  -CCTGCA-ATTGAGA-GGTCAT-TGAGAATCCAG-CCAAGCCCAGGAACA  89

seq1  TGTTTGTTCTCACATTGTAGTTCTTCTCCAGGGGGCTACAGAAGTATAGG  148
      || ||||||||| | |||||    ||||   |||||||||||||||||||
seq2  TG-TTGTTCTCA-AATGTAG----TCTCTCAGGGGCTACAGAAGTATAGG  133

seq1  GTAGGGGTTTGAAAGGGCAGAACCCCAGCCAGGAGCAGGCCAGGGATGAA  198
      ||||||  |||||||||||||| |||||||| ||||| |||| ||||| |
seq2  GTAGGG--TTGAAAGGGCAGAA-CCCAGCCA-GAGCA-GCCA-GGATG-A  176

seq1  AACAGGGTGAAGACAGACGCAGACATAGGTACCTGCCTTGTGGGTGGAAG  248
      ||||||||| ||||||||||||||||||||| ||||| ||||||||||||
seq2  AACAGGGTG-AGACAGACGCAGACATAGGTA-CTGCC-TGTGGGTGGAAG  223

seq1  TCTTGGCAGAACTGAAGATGGCTCAGTGCAACTTCCAACACTGTCTCGTC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGCAGAACTGAAGATGGCTCAGTGCAACTTCCAACACTGTCTCGTC  273

seq1  CCACAGTTGTACCTTATCTGGAAAGCAGACCCGCCACCCAGCCAGTGACA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGTTGTACCTTATCTGGAAAGCAGACCCGCCACCCAGCCAGTGACA  323

seq1  GCTTGGACGCAGTCTGTGAGGACAGAAGCCTCCTGGCCACACTGCTCTGG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGGACGCAGTCTGTGAGGACAGAAGCCTCCTGGCCACACTGCTCTGG  373

seq1  GAGACCCAGCGCCCTACATTCAGGCCAACCACTGTCCAATCCACCACAGT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACCCAGCGCCCTACATTCAGGCCAACCACTGTCCAATCCACCACAGT  423

seq1  CTGGCCCAGGACTTCTGAGTTGCCCTCTCCACCCACCTTGGTGACTCCTG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCCCAGGACTTCTGAGTTGCCCTCTCCACCCACCTTGGTGACTCCTG  473

seq1  AGGGTAAGGGACACTGGCGCAGTGGAGGATAGGGAGAGAACTCAAGGGTG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTAAGGGACACTGGCGCAGTGGAGGATAGGGAGAGAACTCAAGGGTG  523

seq1  AGCGAGTTTACTCAGTTGGCCTCTCCTCATAGGCCCTGCATTTGCTGTTC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGAGTTTACTCAGTTGGCCTCTCCTCATAGGCCCTGCATTTGCTGTTC  573

seq1  TCCTAGGCCTGGGCCTGGGCCTGCTGGCTCCCTTGACTGTCCTGCTGGCC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAGGCCTGGGCCTGGGCCTGCTGGCTCCCTTGACTGTCCTGCTGGCC  623

seq1  TTGTACCTGCTCCGGAAGGCTTGGAGATTGCCTAACACTCCCAAACCTTG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTACCTGCTCCGGAAGGCTTGGAGATTGCCTAACACTCCCAAACCTTG  673

seq1  TTGTGAGTATCACATTGGGCTCAGTAAAGCCTACCTCCTTCACGATGAGC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGAGTATCACATTGGGCTCAGTAAAGCCTACCTCCTTCACGATGAGC  723

seq1  CATAGCTCCTCACTGCTCTTTCCTTCTGTGCTTCTCTTAGGGGGAAACAG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGCTCCTCACTGCTCTTTCCTTCTGTGCTTCTCTTAGGGGGAAACAG  773

seq1  CTTCAGGACCCCGATCCAGGAGGAACACACAGACGCACACTTTACTCTGG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGGACCCCGATCCAGGAGGAACACACAGACGCACACTTTACTCTGG  823

seq1  CCAAGATCTGAGCATTACTACAGGAGTGGATTTTATGGGGCACGGACAAC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGATCTGAGCATTACTACAGGAGTGGATTTTATGGGGCACGGACAAC  873

seq1  CCATATCCTGATGCCTGCCAGTACCCTCCACACCGTTCTAGGTGCTGGGC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATATCCTGATGCCTGCCAGTACCCTCCACACCGTTCTAGGTGCTGGGC  923

seq1  TGGCTCTGGGCTTTCCTATGTATGCTATGCATACTACCTGCCTGGTGGTG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTCTGGGCTTTCCTATGTATGCTATGCATACTACCTGCCTGGTGGTG  973

seq1  CTCCTAATAAACATGCTAGCAGCTGTGAGTCTGTGACTGGCACTAGGGCT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTAATAAACATGCTAGCAGCTGTGAGTCTGTGACTGGCACTAGGGCT  1023

seq1  GAGGTGGCCTCCTATTCTGGTTGGGGAGGGTTTGGGGCCAAAATGAAGGT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTGGCCTCCTATTCTGGTTGGGGAGGGTTTGGGGCCAAAATGAAGGT  1073

seq1  CCACTCAGAGACCTACACTTGGTCACATGTACTCCAGTGTGAGTACGGGT  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTCAGAGACCTACACTTGGTCACATGTACTCCAGTGTGAGTACGGGT  1123

seq1  ATGGAATTC  1157
      |||||||||
seq2  ATGGAATTC  1132

seq1: chr4_155273096_155273988
seq2: B6Ng01-132M19.g_69_960

seq1  GAATTCCATATTCCATCTTCAGGATAAGAAGGGCAGCAGGTCCTTGGCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATATTCCATCTTCAGGATAAGAAGGGCAGCAGGTCCTTGGCCA  50

seq1  AGGATTCAAGCTGTCAGGGGCCTTTGCCCTCTGACAGGAGGTTCAACCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTCAAGCTGTCAGGGGCCTTTGCCCTCTGACAGGAGGTTCAACCAA  100

seq1  CAGGGGCAAAGACAGGGAGATGGGATGGACAGGCCCGGGTAAAGTTGTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGGCAAAGACAGGGAGATGGGATGGACAGGCCCGGGTAAAGTTGTAG  150

seq1  TTTATCCCCATACCCTAGAGGAGATGCAGGCTGGCTGACGTTTGGCACAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCCCCATACCCTAGAGGAGATGCAGGCTGGCTGACGTTTGGCACAT  200

seq1  GAACTGGAGTCTAGAGTAGACCGGCTGGGGAGGGGGCTGGGGGTCCTAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGGAGTCTAGAGTAGACCGGCTGGGGAGGGGGCTGGGGGTCCTAGA  250

seq1  GCAGGGAAGAGGGAAGAACATGTTTGTTTGGTAGAGTCCAGAAGGGGAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGGAAGAGGGAAGAACATGTTTGTTTGGTAGAGTCCAGAAGGGGAGA  300

seq1  AGGAAAACGACCGTGCTCAGGAGCCACGGAGGGGATGTGGTAAGAGAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAACGACCGTGCTCAGGAGCCACGGAGGGGATGTGGTAAGAGAGAG  350

seq1  AGGGCCCAGAATATCTAAAACATACCATGCACTCCTTTTCTGACCTCTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCCCAGAATATCTAAAACATACCATGCACTCCTTTTCTGACCTCTGA  400

seq1  TTCTTGGCATCTATATTGGCTGGCACCCAGGGATGTGCGGAAGTTCAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGGCATCTATATTGGCTGGCACCCAGGGATGTGCGGAAGTTCAAAG  450

seq1  AGACAAAGAAGCAGTTTGACAAAGTGCGGGAGGACATGGAGTTGTCCTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAAAGAAGCAGTTTGACAAAGTGCGGGAGGACATGGAGTTGTCCTTG  500

seq1  GTGAGGAATGCCCAAGCCCCAAGGCACCGGCCCCATGAAGTAGAGGAGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGGAATGCCCAAGCCCCAAGGCACCGGCCCCATGAAGTAGAGGAGGC  550

seq1  CACAGGTGCCCTCACTGTCACCCGGAAGTGCTTCCGCCACTTGGCGCTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGTGCCCTCACTGTCACCCGGAAGTGCTTCCGCCACTTGGCGCTGG  600

seq1  ACTATGTGCTGCAGGTCAGCTGCGGGGCAGCAGAGATGTGACTTGTCCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATGTGCTGCAGGTCAGCTGCGGGGCAGCAGAGATGTGACTTGTCCAA  650

seq1  TGGGTAGGGGTGACACCCAGCAAAGCCTGGAGGTAGGGTAGTCAGTGGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTAGGGGTGACACCCAGCAAAGCCTGGAGGTAGGGTAGTCAGTGGGG  700

seq1  GCAGAGGC-TTTGATGTATACAAGAGGCCCCTAGGGGTAT-GGGCTAGAA  748
      |||||||| ||||||||||||||||||||||||||||||| |||||||||
seq2  GCAGAGGCTTTTGATGTATACAAGAGGCCCCTAGGGGTATGGGGCTAGAA  750

seq1  TTCTTGGTTTCATCCAGACCATGTCTCATATTCAGACAAGAGGAAAGGCT  798
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TTCTTGGTTTCATCCAGATCATGTCTCATATTCAGACAAGAGGAAAGGCT  800

seq1  GTGAATCAGCCATCCCAG-CTCCATCTTCCTTAGGACTTTTCCTGTGATA  847
      |||||| ||| ||||||| |||| |||||||||||| |||| ||||||||
seq2  GTGAATTAGCTATCCCAGCCTCCTTCTTCCTTAGGATTTTTTCTGTGATA  850

seq1  CCATGCAAAGACCTAAAAACTACCTGGGATTTTGGAACTATAAGCG  893
      || ||| ||||||  ||||||||  |||||||||||||||| ||||
seq2  CC-TGC-AAGACC--AAAACTACTGGGGATTTTGGAACTATTAGCG  892