BAC Information

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BAC

Clone NameB6Ng01-132N22
Chromosome4 (Build37)
Map Location 89,675,371 - 89,676,498
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040617, Mtap, LOC625574, Cdkn2a, Cdkn2b, LOC664785, Dmrta1
Downstream geneZfp352, LOC619842, LOC435792, Ppia-ps4_804.1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-132N22.bB6Ng01-132N22.g
ACCDH933565DH933566
length1,2111,122
definitionDH933565|Mus musculus domesticus DNA, BAC clone: B6Ng01-132N22, 5' end.DH933566|Mus musculus domesticus DNA, BAC clone: B6Ng01-132N22, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatgcggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgaccgtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccaa
tttctcctctataagtttaagtgtctctggttgtatgtgaagttccttga
tccacttagatttgaccttagtacaaagagataagtatggatcgattcgc
attcttctacacgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtggattcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtctggcatggtgattccaccagaagttcttt
tatccttgagaagactttttgctatcctaggttttttgttattccagacg
aatttgcaaattgctccttccaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatggagatctttccatcttc
tgagatcttctttatttctttcttcagagatttgaagttttcatcataca
gatctttcacttccttagtagagtcacgccaagatattttatattattta
tgactatgagaaggttgttgtttccctattttctttcttagcctgtttat
tcttttgtatagagaaggccattgacttgtttgagtttatttaaatcagc
tacttcaaccgagctgtttaccagtacaaagttgatcagaatcagtgaca
tctaacaatccatatcacctaaggaatgaaagcagtatatagcttcctag
caaaatgctgtacaacgttaggcgaagttctatcaacctctgaagaatca
tactcagtctg
gaattctgttttacaaacatgtattgagacagagacaaattttataaaca
taacactttaatcaatttttacactgaactataaatagaaaatcagaata
acaaaacaatttcataattttttatgattcacacagcaaggaaaccaagc
taatatctgagtcattcatgtcttgttagagcttgagcttcaattatctt
cataggagactctacattaaaatatattctacattgcatgatttttgtta
tatatttctcactctaaattactatgcaagggttttaagtaactttctga
ggtcaacaaaatagtaaagctacttggaattgtctgttagctacttctcc
ctgcttgctacactgcatccaccctttaagccatggagggtgtcatagta
tcttctaaatattcaaaagcagattaagaaaaataagatgccatggaacc
accaaaaagattatataattctaaacatttttgcaggaagtcaaagaaac
ctgatttcatataaaaacattactacatataaaaatcacatgttgatctt
cacacaataatagtgagtgactttaataccccactctccccattagacct
gtcatccagaccaacagtaaacagagaaatgctcgatttaaatatcgtca
tagatcatatatatcccaaagtcatttacaaagcatgtcaactaaacatt
aaagatgtactttttttctcagctgctcatggaactttctcaaaaactga
caacatattagaactttacaaacacacatgtaccacatacatatacatat
gtgtacatataatatgaagagaaggaaaatggaggaaacaaccatcattt
tacattaaacattctataatttaggtaaatcgtgatattgatagtttatg
aagaagaatgctaagttgagaattctgaatttctattgaaacctagagga
catgaattactgacatactctatgtgacatactctatgtgacatgaatta
ctgacatactcacatagagtatgtcagtataactgcagcccactagaaaa
cacaaaccctaggacatatgcatgtaatacaataaaatcataagtactta
ctcaaacatggataaattctga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_89675371_89676498
seq2: B6Ng01-132N22.g_66_1187 (reverse)

seq1  TCAGAAATTAT-CATGTTTTGAGTAAGTAACCTATGATTTTGGTTGTATT  49
      |||||| |||| |||| ||||||||||| || |||||||||  |||||||
seq2  TCAGAATTTATCCATG-TTTGAGTAAGT-ACTTATGATTTT-ATTGTATT  47

seq1  ACATGCATAATTGTTCTAGGGTTTGTG-TGTCTAGTGGGCTGCAGGTTAA  98
      |||||||||  ||| |||||||||||| | |||||||||||||| |||| 
seq2  ACATGCATA--TGTCCTAGGGTTTGTGTTTTCTAGTGGGCTGCA-GTTA-  93

seq1  TTACTGACATACTCTATGTGAGTATGTCAGTAATTCATGTCACATAGAGT  148
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -TACTGACATACTCTATGTGAGTATGTCAGTAATTCATGTCACATAGAGT  142

seq1  ATGTCACATAGAGTATGTCAGTAATTCATGTCCTCTAGGTTTCAATAGAA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCACATAGAGTATGTCAGTAATTCATGTCCTCTAGGTTTCAATAGAA  192

seq1  ATTCAGAATTCTCAACTTAGCATTCTTCTTCATAAACTATCAATATCACG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGAATTCTCAACTTAGCATTCTTCTTCATAAACTATCAATATCACG  242

seq1  ATTTACCTAAATTATAGAATGTTTAATGTAAAATGATGGTTGTTTCCTCC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACCTAAATTATAGAATGTTTAATGTAAAATGATGGTTGTTTCCTCC  292

seq1  ATTTTCCTTCTCTTCATATTATATGTACACATATGTATATGTATGTGGTA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCCTTCTCTTCATATTATATGTACACATATGTATATGTATGTGGTA  342

seq1  CATGTGTGTTTGTAAAGTTCTAATATGTTGTCAGTTTTTGAGAAAGTTCC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGTGTTTGTAAAGTTCTAATATGTTGTCAGTTTTTGAGAAAGTTCC  392

seq1  ATGAGCAGCTGAGAAAAAAAGTACATCTTTAATGTTTAGTTGACATGCTT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGCAGCTGAGAAAAAAAGTACATCTTTAATGTTTAGTTGACATGCTT  442

seq1  TGTAAATGACTTTGGGATATATATGATCTATGACGATATTTAAATCGAGC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAATGACTTTGGGATATATATGATCTATGACGATATTTAAATCGAGC  492

seq1  ATTTCTCTGTTTACTGTTGGTCTGGATGACAGGTCTAATGGGGAGAGTGG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTCTGTTTACTGTTGGTCTGGATGACAGGTCTAATGGGGAGAGTGG  542

seq1  GGTATTAAAGTCACTCACTATTATTGTGTGAAGATCAACATGTGATTTTT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATTAAAGTCACTCACTATTATTGTGTGAAGATCAACATGTGATTTTT  592

seq1  ATATGTAGTAATGTTTTTATATGAAATCAGGTTTCTTTGACTTCCTGCAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTAGTAATGTTTTTATATGAAATCAGGTTTCTTTGACTTCCTGCAA  642

seq1  AAATGTTTAGAATTATATAATCTTTTTGGTGGTTCCATGGCATCTTATTT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTTTAGAATTATATAATCTTTTTGGTGGTTCCATGGCATCTTATTT  692

seq1  TTCTTAATCTGCTTTTGAATATTTAGAAGATACTATGACACCCTCCATGG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTAATCTGCTTTTGAATATTTAGAAGATACTATGACACCCTCCATGG  742

seq1  CTTAAAGGGTGGATGCAGTGTAGCAAGCAGGGAGAAGTAGCTAACAGACA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAAGGGTGGATGCAGTGTAGCAAGCAGGGAGAAGTAGCTAACAGACA  792

seq1  ATTCCAAGTAGCTTTACTATTTTGTTGACCTCAGAAAGTTACTTAAAACC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCAAGTAGCTTTACTATTTTGTTGACCTCAGAAAGTTACTTAAAACC  842

seq1  CTTGCATAGTAATTTAGAGTGAGAAATATATAACAAAAATCATGCAATGT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCATAGTAATTTAGAGTGAGAAATATATAACAAAAATCATGCAATGT  892

seq1  AGAATATATTTTAATGTAGAGTCTCCTATGAAGATAATTGAAGCTCAAGC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATATATTTTAATGTAGAGTCTCCTATGAAGATAATTGAAGCTCAAGC  942

seq1  TCTAACAAGACATGAATGACTCAGATATTAGCTTGGTTTCCTTGCTGTGT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAACAAGACATGAATGACTCAGATATTAGCTTGGTTTCCTTGCTGTGT  992

seq1  GAATCATAAAAAATTATGAAATTGTTTTGTTATTCTGATTTTCTATTTAT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCATAAAAAATTATGAAATTGTTTTGTTATTCTGATTTTCTATTTAT  1042

seq1  AGTTCAGTGTAAAAATTGATTAAAGTGTTATGTTTATAAAATTTGTCTCT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCAGTGTAAAAATTGATTAAAGTGTTATGTTTATAAAATTTGTCTCT  1092

seq1  GTCTCAATACATGTTTGTAAAACAGAATTC  1128
      ||||||||||||||||||||||||||||||
seq2  GTCTCAATACATGTTTGTAAAACAGAATTC  1122