BAC Information

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BAC

Clone NameB6Ng01-133G16
Chromosome4 (Build37)
Map Location 147,129,481 - 147,130,007
singlet/doubletsinglet
Overlap geneLOC100041677
Upstream geneOTTMUSG00000010694, LOC626480, LOC666474, LOC666482, LOC434514, LOC626288, LOC666498, LOC100043034, LOC666514, LOC100041561, LOC100041570, OTTMUSG00000010657, LOC384087, LOC666546, LOC666557, LOC545716, LOC666574, LOC666581, EG666588, LOC627701, OTTMUSG00000010671, LOC545718, OTTMUSG00000010673, 2610305D13Rik, LOC666618, LOC100043100, LOC666640, LOC194189, LOC666652
Downstream geneLOC277692, MGC67181, D4Wsu114e, Fv1, Mfn2, Plod1, 2510039O18Rik, Nppb, Nppa, Clcn6, Mthfr, LOC433806, Agtrap, 2610109H07Rik, Mad2l2, Fbxo6, Fbxo44, Fbxo2, Ptchd2, Ubiad1, Frap1, Angptl7, Exosc10, LOC100043151, Srm, Masp2, Tardbp, Gm572, LOC100041733, LOC100041742
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-133G16.bB6Ng01-133G16.g
ACCDH933969DH933970
length1,1181,244
definitionDH933969|Mus musculus domesticus DNA, BAC clone: B6Ng01-133G16, 5' end.DH933970|Mus musculus domesticus DNA, BAC clone: B6Ng01-133G16, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctgatgaattctcagtttgcccttttcagtaaaggatttgtca
cattcagtgcatttgtaaggtttctctcctgtatgaattctctgatgaat
cctcagactgcctttgaaagtaaagcatttgtcacattcagtgcatttgt
aaggtttctctcctgtatgaattctctgatgaattctcaaacagccattt
tcagtaaaggatttgtcacattcactacatttgtagggtttctctcctgt
atgaattctctgatgaatcctcagactgcctttgaaagtaaagcatttgt
cacattcagtgcatttgtaaggtttctctcctgtatgaattctctgatga
atcctcaaactgaattttttagtaaagcatttgtcacattcactgcattt
gtaaggtttctctcctgtatgaattctctgatgaattctcagatggccat
tttcagtaaaggatttgtcacattgactacatttgtaaggtttctcacct
gtatgatttctctgatgaattctcagatggccattttcagtaaaggattt
gtcacattgactacatttgtaaggtttctctcctgtatgaattctctgat
gaatattaagatgggatttttgggtaaagcatttgtcacattcactgcat
ttgtaaggtttatctcctgtatgaatcctctgatgaattctcagattgcc
tttttcagtaaagcatttctcacatacaatgcatttgtaaggtttctctc
ctgtatgaattctctgatgaatattaagatgagatttttgggtaaagcat
ttgtcacattcactacatttgtaaggtttctctcctgtatgaattctctg
atgaatattaagatgaaatttgtgggtaaagcatttgtcacattcactac
atttataaattttctctctgcatgaattccctgatggatacttagatcga
tctgatgggtaaagcatttgtcacttttactactctgtacgtttcttttc
atgataaatctcctgctgacttgaagtttgtctctctgggtagatatttg
tcaaattactacatttggtaaggttcacttccagatatttcgtttcacca
tgactcttatgtttagaa
gaattcatacaggagagacaccttacaaatgtaatgaatgtgacaaatgc
tttacctgaaaatcacatcttagtattcatcagataattcatacaggaga
gaaaccttacaaatgtaatgaatgtgacaaatcctttactgaaaatggct
gtctgagaattcatcagagaattcatacaggagagaaaccttacaaatgt
aatgaatgtgacaaatgctttacctgaaaatcacatcttagtattcatca
gataattcatacagaagagaaaccttacaaatgtagtgaatgtgacaaat
cctttactgaaaatggctgtctgagaattcatcagagaattcatacagga
gagaaaccttacaaatgtagtgaatgtgacaaatgctttactaaaaaatc
cagtttgaggattcatcagagatttcatacaggagagaaaccttacaaat
gtagtgaatgtgacaaatgttttattcaaaaatgcagtctgataattcat
cagagaattcatacaggagagaaaccttacaaatgtagtgaatgtgacaa
agctttactgagaaagtcaatctgagaaggcatcagagaactcatacagg
ggagaattcttacaaatgtattgaatgtgacaaatgttttgcccagaaat
cctatcttgtttttaatcacagaaatcatacattaaagaagccttacaaa
tgcagtcaatgtgacaaatgattttcccacaaacttagtctgagaatgca
tcagagaattcatacagtagagaaaacttacaaaaatgcagtgaatgtga
taattgctttactaataaaggcagactgagaattaatcagataatttata
catttaaaaaaacccttacaagtattttgtatgtgataaatgcagtaccc
acaacatcagtctgacaaatcacagatattcaaacagtagagcaacatta
taaatgaaatgaatgagatagtccttaacaagaaatatcatctaaaattc
actggagaattcttccaaaagggaacatttcaatacattgacggttgatc
tttattttgggctatcttctagaatgatagatattatacaggcaggaatc
taacaaatatatttatgcctgaaaatctttgacctcatttcatggcagaa
aaatatgtaaaattttttattgggaaattggttctctctggaggaagtgg
ccaatgtttacacgggtagtattctctttcaacacgccgtgggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_147129481_147130007
seq2: B6Ng01-133G16.b_643_1163

seq1  GATGACTATTAAGATGGGATTTGTGGGTAAAGCATTTGTCACATTCACTA  50
      ||||| |||||||||||||||| |||||||||||||||||||||||||| 
seq2  GATGAATATTAAGATGGGATTTTTGGGTAAAGCATTTGTCACATTCACTG  50

seq1  CATTTGTAAGGTTTCTCTCCTGTATGAATTCTCTGATGAACGCTAAGATG  100
      |||||||||||||| |||||||||||||| ||||||||||  || |||| 
seq2  CATTTGTAAGGTTTATCTCCTGTATGAATCCTCTGATGAATTCTCAGATT  100

seq1  AGATTTTTGGGTAAAGCATTTGTCACATTCACTACATTTGTAAGGTTTCT  150
         |||||  ||||||||||| |||||| || | ||||||||||||||||
seq2  GCCTTTTTCAGTAAAGCATTTCTCACATACAATGCATTTGTAAGGTTTCT  150

seq1  CTCCTGTATGAATTCTCTGATGCATACTAAAACTGA-ATTTGTGTTTAAA  199
      |||||||||||||||||||||| ||| ||| | ||| |||| ||  ||||
seq2  CTCCTGTATGAATTCTCTGATGAATATTAAGA-TGAGATTTTTGGGTAAA  199

seq1  ACATTTGTCACATTCACTGCATTTGTAAGGGTTCTCTCCTGTATGAATTC  249
       ||||||||||||||||| ||||||||||| |||||||||||||||||||
seq2  GCATTTGTCACATTCACTACATTTGTAAGGTTTCTCTCCTGTATGAATTC  249

seq1  TCTGATGAATATTAAGATGGGATTTGTGGGTAAAGCATTTGTCACATTCA  299
      |||||||||||||||||||  |||||||||||||||||||||||||||||
seq2  TCTGATGAATATTAAGATGAAATTTGTGGGTAAAGCATTTGTCACATTCA  299

seq1  CTACATTTGTAAATTTTCTCTTCTGCATGAATTCCCTGATGGATACTAAG  349
      |||||||| ||||||||||| |||||||||||||||||||||||||| ||
seq2  CTACATTTATAAATTTTCTC-TCTGCATGAATTCCCTGATGGATACTTAG  348

seq1  ATGGATCTGATGGGTAAAGCATTTGTCACTTTTACTACTTCTGTAAGGTT  399
      || ||||||||||||||||||||||||||||||||||| ||||| | |||
seq2  ATCGATCTGATGGGTAAAGCATTTGTCACTTTTACTAC-TCTGT-ACGTT  396

seq1  TCTTTCCATGATAAATTCTCTGCTGACTTTGAAGTTTTTCTCTCTGGGTA  449
      ||||| ||||||||||   |||||||| ||||||||| ||||||||||| 
seq2  TCTTTTCATGATAAATCTCCTGCTGAC-TTGAAGTTTGTCTCTCTGGGT-  444

seq1  AGATATTTGTCAAATTCACTACATTTGTAAGGGTTCAC-TCCAGTATTGT  498
      |||||||||||||||| ||||||||||  | ||||||| |||||   | |
seq2  AGATATTTGTCAAATT-ACTACATTTGGTAAGGTTCACTTCCAG--ATAT  491

seq1  TTCGTTTCACCATGACT-TTATGTTTAGAA  527
      ||||||||||||||||| ||||||||||||
seq2  TTCGTTTCACCATGACTCTTATGTTTAGAA  521