BAC Information

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BAC

Clone NameB6Ng01-133J19
Chromosome4 (Build37)
Map Location 91,435,218 - 91,436,461
singlet/doubletsinglet
Overlap genenone
Upstream genePpia-ps4_804.1, LOC664840, LOC664848, LOC100042274, Elavl2, LOC664864
Downstream geneLOC620016, LOC654475, 4930577H14Rik, LOC664886, 1700011H22Rik, LOC68280
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-133J19.bB6Ng01-133J19.g
ACCDH934114DH934115
length7321,224
definitionDH934114|Mus musculus domesticus DNA, BAC clone: B6Ng01-133J19, 5' end.DH934115|Mus musculus domesticus DNA, BAC clone: B6Ng01-133J19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatgaaattcttaggcaataggaatattagaaatagaaaatatca
tcctgagtgaagtaacccattcacaaaagaacacacatggtatacattca
ctgataagtgggtattagccaaaaactcagaatactgaagacataattca
cagaccacattaagcttaagaaaaaggaagaccaaagtgtgggtgcttct
gtccttcttagaaggggtaacaaaatactcttggaaacaaatatggagac
aaagtgtggagcagagactgaaagaaagcctatccagcgactgccccacc
ttgggatccatcccatattcagccaccaaatgcagatgatattgtggatg
ccaagaagtgcatgctggcaggagcctgatatagctgtctcctgagagga
tctgccagagccttacatatacagaggcagatgctcacagcctaccatcg
aactggtcacaggtttcccaatggaggagttagagaaaggactgaaagag
ccgatggggtttgaacccccataggaatacaatagtgtcaaccaaccaga
gttcccaggttctaaaccatcaaccaaggagtacacatggagggacccat
ggatctacctgtatattgtagcagaggattgccttcttgggcatcaatga
gagaagaggcccttggtcttgtgaaggctcaatgccccagtgtaggggaa
tgcaagggagtggtgttgggaatgggtaggtg

gaattcacctattatggatcccgaggaagggtcatactttgtttttgtaa
gttaacttgcattagatgcagttttgtactgtgaactgtgaagtagcaag
cagagtaaatgaaagcaagctatattagatgttctaagaaaggaaataca
atctcatgaaatgcttacatgtaatgttcaactgcaacctcttacagctt
agtagaagaaaaataatagcaatgaacaaaggcaaaaaatagagaatagt
aaaaaccatgatagattttttaagcattccaacagcatctaaaattactt
tttagatcaatagcccaaatacacatcgtaaaaaatgttatcaagcaggc
ttaaaaactactcaactatatattgtctacaagaaatccacttggcttca
ttacagtattatttgtgtcaattgctatagtatgcattaaaggcacagaa
cttaattatctagcattaatcaaagtgtataacctcaagacagcatctct
gttactttcttgtccttaaatctgaaagccactattctcctaattctatg
atcttgaaaatttagggctacaagaaagttcgtgtattgcatctttatgt
gttttcaaatgaaagtagcatgacctgtattcaatggatgaatgataatc
ttgtgtgtacatgtgctgcactatcactatcatgccttcagttcttcagc
caatgctttttatatatttgatattatgctcaatgctgtttaaattttta
tttcttttttattagatatttgatttatttaattacaaaaattagcccct
ttcctagttacctccaaaaaccccctatcccttcccccctccccctgctc
accaaccaacccactcatgcttcctgtccctggcattctcctatactgag
gcatagaaccttcacaggaccaaaggcctctccacccattgatgaacaac
aggccatcctctgctacatattcagctagagccatgtgtcccacatgtgt
tttctttggtggctgtttagtctagggagcctctagagatactggctagt
tcatattgtgttcatctatggggcgcattcccctcagtcctggtcttctc
tagctcttcattgggcactgtgtccatccatggatgtatgtgacatcact
cggatgcaggactgccagcccttcaggagacgccatctcctagaggttcc
tgttcgacaagacctcttgtttgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_91435218_91436461
seq2: B6Ng01-133J19.g_65_1288

seq1  GAATTCACCTATTATGGATCCCGAGGAAGGGTCATACTTTGTTTTTGTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCTATTATGGATCCCGAGGAAGGGTCATACTTTGTTTTTGTAA  50

seq1  GTTAACTTGCATTAGATGCAGTTTTGTACTGTGAACTGTGAAGTAGCAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAACTTGCATTAGATGCAGTTTTGTACTGTGAACTGTGAAGTAGCAAG  100

seq1  CAGAGTAAATGAAAGCAAGCTATATTAGATGTTCTAAGAAAGGAAATACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTAAATGAAAGCAAGCTATATTAGATGTTCTAAGAAAGGAAATACA  150

seq1  ATCTCATGAAATGCTTACATGTAATGTTCAACTGCAACCTCTTACAGCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCATGAAATGCTTACATGTAATGTTCAACTGCAACCTCTTACAGCTT  200

seq1  AGTAGAAGAAAAATAATAGCAATGAACAAAGGCAAAAAATAGAGAATAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGAAGAAAAATAATAGCAATGAACAAAGGCAAAAAATAGAGAATAGT  250

seq1  AAAAACCATGATAGATTTTTTAAGCATTCCAACAGCATCTAAAATTACTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACCATGATAGATTTTTTAAGCATTCCAACAGCATCTAAAATTACTT  300

seq1  TTTAGATCAATAGCCCAAATACACATCGTAAAAAATGTTATCAAGCAGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGATCAATAGCCCAAATACACATCGTAAAAAATGTTATCAAGCAGGC  350

seq1  TTAAAAACTACTCAACTATATATTGTCTACAAGAAATCCACTTGGCTTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAACTACTCAACTATATATTGTCTACAAGAAATCCACTTGGCTTCA  400

seq1  TTACAGTATTATTTGTGTCAATTGCTATAGTATGCATTAAAGGCACAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGTATTATTTGTGTCAATTGCTATAGTATGCATTAAAGGCACAGAA  450

seq1  CTTAATTATCTAGCATTAATCAAAGTGTATAACCTCAAGACAGCATCTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAATTATCTAGCATTAATCAAAGTGTATAACCTCAAGACAGCATCTCT  500

seq1  GTTACTTTCTTGTCCTTAAATCTGAAAGCCACTATTCTCCTAATTCTATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACTTTCTTGTCCTTAAATCTGAAAGCCACTATTCTCCTAATTCTATG  550

seq1  ATCTTGAAAATTTAGGGCTACAAGAAAGTTCGTGTATTGCATCTTTATGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGAAAATTTAGGGCTACAAGAAAGTTCGTGTATTGCATCTTTATGT  600

seq1  GTTTTCAAATGAAAGTAGCATGACCTGTATTCAATGGATGAATGATAATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCAAATGAAAGTAGCATGACCTGTATTCAATGGATGAATGATAATC  650

seq1  TTGTGTGTACATGTGCTGCACTATCACTATCATGCCTTCAGTTCTTCAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTGTACATGTGCTGCACTATCACTATCATGCCTTCAGTTCTTCAGC  700

seq1  CAATGCTTTTTATATATTTGATATTATGCTCAATGCTGTTTAAATTTTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGCTTTTTATATATTTGATATTATGCTCAATGCTGTTTAAATTTTTA  750

seq1  TTTCTTTTTTATTAGATATTTGATTTATTTAATTACAAAAATTAGCCCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTTTTATTAGATATTTGATTTATTTAATTACAAAAATTAGCCCCT  800

seq1  TTCCTAGTTACCTCCAAAAACCCCCTATCCCTTCCCCCCTCCCCCTGCTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTAGTTACCTCCAAAAACCCCCTATCCCTTCCCCCCTCCCCCTGCTC  850

seq1  ACCAACCAACCCACTCATGCTTCCTGTCCCTGGCATTCTCCTATACTGAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAACCAACCCACTCATGCTTCCTGTCCCTGGCATTCTCCTATACTGAG  900

seq1  GCATAGAACCTTCACAGGACCAAAGGCCTCTCCACCCATTGATGAACAAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAGAACCTTCACAGGACCAAAGGCCTCTCCACCCATTGATGAACAAC  950

seq1  AAGGCCATCCTCTGCTACATATTCAGCTAGAGCCATGTGTCCCACAATGT  1000
       |||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  -AGGCCATCCTCTGCTACATATTCAGCTAGAGCCATGTGTCCCAC-ATGT  998

seq1  GTTTTCTTTGGTGGCTGGTTTAGTTCTAGGGAG-CTCTAGAGATACTGGT  1049
      |||||||||||||||| |||||| ||||||||| ||||||||||||||| 
seq2  GTTTTCTTTGGTGGCT-GTTTAG-TCTAGGGAGCCTCTAGAGATACTGGC  1046

seq1  TAGTTCATATTGTTGTTCATCCTATGGGGCTGCAATCCCCCTCAGCCCCT  1099
      |||||||||||| ||||||| ||||||||| || || |||||||| ||  
seq2  TAGTTCATATTG-TGTTCAT-CTATGGGGC-GC-ATTCCCCTCAGTCC--  1090

seq1  TGGGTACTTTCTCTAGCTTCTTCATTGGGGACCCTGTGCTCCATCCAATG  1149
      |||     ||||||||| |||||||||||  | ||||| ||||||| |||
seq2  TGG---TCTTCTCTAGC-TCTTCATTGGG--CACTGTG-TCCATCC-ATG  1132

seq1  GATGTATGTGAGCATCCACTTCTGTATTGTCAGGCACTGACAGAGCCTCT  1199
      ||||||||||| ||| ||||   | ||   |||| |||| |  ||||  |
seq2  GATGTATGTGA-CAT-CACT--CGGAT--GCAGG-ACTGCC--AGCCCTT  1173

seq1  CAGGAGACAGCTATCTC----AGGTTCCTG-TCAGCAAG--CTCTTGTTG  1242
      |||||||| || |||||    ||||||||| ||  ||||  |||||||| 
seq2  CAGGAGAC-GCCATCTCCTAGAGGTTCCTGTTCGACAAGACCTCTTGTTT  1222

seq1  GC  1244
      ||
seq2  GC  1224


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