BAC Information

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BAC

Clone NameB6Ng01-133K15
Chromosome4 (Build37)
Map Location 118,690,885 - 118,814,664
singlet/doubletdoublet
Overlap geneOTTMUSG00000008833, Slc2a1
Upstream geneSt3gal3, Jmjd2a, Ptprf, Hyi, BC059842, Med8, Elovl1, Cdc20, Mpl, Tie1, LOC545675, LOC666596, 2610528J11Rik, 6330530A05Rik, 1110020C03Rik, Ebna1bp2, LOC100041290, Olfr62, Olfr1343-ps1, Olfr1342, Olfr1341, Olfr1340, Olfr1339, Olfr1338, Olfr1524-ps1, Olfr1337, Olfr219-ps1, GA_x5J8B7W3BSW-40181-41086, Olfr1335, Olfr1333, GA_x5J8B7TQTH0-2-774, Olfr1332-ps1, Olfr1331, Olfr1330, Olfr1329, Olfr1519, Lao1, LOC666703
Downstream geneZfp691, Ermap, Ccdc23, 4930538K18Rik, AU022252, Lepre1, Cldn19, Ybx1, Ppih, 1700041C02Rik, Ldha-ps2, LOC100041471, Ppcs, Zmynd12, BC057371, LOC666766, LOC384052, AA415398, Foxj3, Guca2a, Guca2b, Hivep3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-133K15.bB6Ng01-133K15.g
ACCDH934154DH934155
length1,062158
definitionDH934154|Mus musculus domesticus DNA, BAC clone: B6Ng01-133K15, 5' end.DH934155|Mus musculus domesticus DNA, BAC clone: B6Ng01-133K15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(118,690,885 - 118,691,954)(118,814,507 - 118,814,664)
sequence
gaattctgcatggcatgtgccatcctgtcaaactgtgcatgcacagaatg
attctagggggccccaactggaacctgagccccattcctagccccatggc
agcccccgagacttcctcatcctctggagaaataaatgagggagtggaca
aagaagggaagacaggagaaagacagagagaactcgcccagaggacatag
caggtaccaggttagtctagcttatgacgcatgaccctgtctcaaaggaa
ttttttttttaagtaaactaggagtgaagaaatagaacaaagaagtccac
agaattccacagaagcttcaacacaggaggggctccagagaacattcttg
aattttctcggcccctatcatcacaaattccaggctggggcaaaggcgag
ggcataagtcctgctgaagccatccacccgcagctgctgaggagggctgt
ctcttatctggaggcagcagactgtcatgagatcttgaattctctagata
gcagaagcttagggacccgagaccctacaaagtgacacatgactgctcca
ggaagggctctggtctgacctttgtgtcaacaacaacaagaaggagaaca
gtgcaccctgacacggacactttgtactgggtactttacccctgtaaggt
cgttagcttttgtgtcaagagagcttgctaagagcatcaccattttgctg
gtaagagagccaaggctcaagacattaaggatcttctcaaagccagccca
agcctgatggtggcaatagccatccaccttctgctctgtgtcagcccctc
tttagtcacctggtgccctgactcacccatccctcatggcagcccggggg
cagcatagccacttacagaggacccgagatgcggctatacaataagcatg
cacacccagaaatagaggttcagtgggctgacttgcgtttacttgcactg
ccgcagggctacagggtataaacaccaggaaaacctgccatgtgggatgg
ggtagctctatcactgatgcttgggatctggctacctgcagccaatgggg
tgcccactgaga
catatgtttaaggccacatagtgagaccctgtctcaaaacaaaacacaat
caaaaacaaaaaaataagaaaaccataaaaaacaagagtgactgaacaag
cacacacgaagaagaggttgtggaaggatggggaaagagtgggaaaggaa
gggagaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_118690885_118691954
seq2: B6Ng01-133K15.b_48_1109

seq1  GAATTCTGCATGGCATGTGCCATCCTGTCAAACTGTGCATGCACAGAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGCATGGCATGTGCCATCCTGTCAAACTGTGCATGCACAGAATG  50

seq1  ATTCTAGGGGGCCCCAACTGGAACCTGAGCCCCATTCCTAGCCCCATGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTAGGGGGCCCCAACTGGAACCTGAGCCCCATTCCTAGCCCCATGGC  100

seq1  AGCCCCCGAGACTTCCTCATCCTCTGGAGAAATAAATGAGGGAGTGGACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCCCGAGACTTCCTCATCCTCTGGAGAAATAAATGAGGGAGTGGACA  150

seq1  AAGAAGGGAAGACAGGAGAAAGACAGAGAGAACTCGCCCAGAGGACATAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGGGAAGACAGGAGAAAGACAGAGAGAACTCGCCCAGAGGACATAG  200

seq1  CAGGTACCAGGTTAGTCTAGCTTATGACGCATGACCCTGTCTCAAAGGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTACCAGGTTAGTCTAGCTTATGACGCATGACCCTGTCTCAAAGGAA  250

seq1  TTTTTTTTTTAAGTAAACTAGGAGTGAAGAAATAGAACAAAGAAGTCCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTAAGTAAACTAGGAGTGAAGAAATAGAACAAAGAAGTCCAC  300

seq1  AGAATTCCACAGAAGCTTCAACACAGGAGGGGCTCCAGAGAACATTCTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTCCACAGAAGCTTCAACACAGGAGGGGCTCCAGAGAACATTCTTG  350

seq1  AATTTTCTCGGCCCCTATCATCACAAATTCCAGGCTGGGGCAAAGGCGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTCTCGGCCCCTATCATCACAAATTCCAGGCTGGGGCAAAGGCGAG  400

seq1  GGCATAAGTCCTGCTGAAGCCATCCACCCGCAGCTGCTGAGGAGGGCTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATAAGTCCTGCTGAAGCCATCCACCCGCAGCTGCTGAGGAGGGCTGT  450

seq1  CTCTTATCTGGAGGCAGCAGACTGTCATGAGATCTTGAATTCTCTAGATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTATCTGGAGGCAGCAGACTGTCATGAGATCTTGAATTCTCTAGATA  500

seq1  GCAGAAGCTTAGGGACCCGAGACCCTACAAAGTGACACATGACTGCTCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAAGCTTAGGGACCCGAGACCCTACAAAGTGACACATGACTGCTCCA  550

seq1  GGAAGGGCTCTGGTCTGACCTTTGTGTCAACAACAACAAGAAGGAGAACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGGCTCTGGTCTGACCTTTGTGTCAACAACAACAAGAAGGAGAACA  600

seq1  GTGCACCCTGACACGGACACTTTGTACTGGGTACTTTACCCCTGTAAGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCACCCTGACACGGACACTTTGTACTGGGTACTTTACCCCTGTAAGGT  650

seq1  CGTTAGCTTTTGTGTCAAGAGAGCTTGCTAAGAGCATCACCATTTTGCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTAGCTTTTGTGTCAAGAGAGCTTGCTAAGAGCATCACCATTTTGCTG  700

seq1  GTAAGAGAGCCAAGGCTCAAGACATTAAGGATCTTCTCAAAGCCAGCCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGAGAGCCAAGGCTCAAGACATTAAGGATCTTCTCAAAGCCAGCCCA  750

seq1  AGCCTGATGGTGGCAATAGCCATCCACCTTCTGCTCTGTGTCAGCCCCTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGATGGTGGCAATAGCCATCCACCTTCTGCTCTGTGTCAGCCCCTC  800

seq1  TTTAGTCACCTGGTGCCCTGACTCACCCATCCCTCATGGCAGCCCGGGGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTCACCTGGTGCCCTGACTCACCCATCCCTCATGGCAGCCCGGGGG  850

seq1  CAGCATAGCCACTTACAGAGGACCCGAGATGCGGCTATACAATAAGCAAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||| | 
seq2  CAGCATAGCCACTTACAGAGGACCCGAGATGCGGCTATACAATAAGC-AT  899

seq1  GCACACCCAGAAATAGAGGTTCAGTGGGCTGACTTGCGTTTACTTGCACT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACACCCAGAAATAGAGGTTCAGTGGGCTGACTTGCGTTTACTTGCACT  949

seq1  GCCGCAGGGCTACAGGGTATAAACACCAGGAAAACCTGCCATGTGGGATG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGCAGGGCTACAGGGTATAAACACCAGGAAAACCTGCCATGTGGGATG  999

seq1  GGGTAGCTCTATCCACTGATGCTTGGGGATCCTGGCTACCTGCCAGCCAA  1050
      |||||||||||| ||||||||||| ||||| ||||||||||| |||||||
seq2  GGGTAGCTCTAT-CACTGATGCTT-GGGAT-CTGGCTACCTG-CAGCCAA  1045

seq1  ATGGGGGTGCCCCACTGAGA  1070
         |||||| ||||||||||
seq2  --TGGGGTG-CCCACTGAGA  1062

seq1: chr4_118814507_118814664
seq2: B6Ng01-133K15.g_73_230 (reverse)

seq1  TCTCTCCCTTCCTTTCCCACTCTTTCCCCATCCTTCCACAACCTCTTCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCCCTTCCTTTCCCACTCTTTCCCCATCCTTCCACAACCTCTTCTT  50

seq1  CGTGTGTGCTTGTTCAGTCACTCTTGTTTTTTATGGTTTTCTTATTTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGTGTGCTTGTTCAGTCACTCTTGTTTTTTATGGTTTTCTTATTTTTT  100

seq1  TGTTTTTGATTGTGTTTTGTTTTGAGACAGGGTCTCACTATGTGGCCTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTGATTGTGTTTTGTTTTGAGACAGGGTCTCACTATGTGGCCTTA  150

seq1  AACATATG  158
      ||||||||
seq2  AACATATG  158