BAC Information

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BAC

Clone NameB6Ng01-134G20
Chromosome4 (Build37)
Map Location 74,928,175 - 74,929,269
singlet/doubletsinglet
Overlap genenone
Upstream geneJmjd2c, LOC100040258, LOC100039814, LOC636847, 3110001D03Rik
Downstream geneLOC623529, LOC100039833, LOC100039884, LOC667845, Ptprd
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-134G20.bB6Ng01-134G20.g
ACCDH934726DH934727
length1,1941,087
definitionDH934726|Mus musculus domesticus DNA, BAC clone: B6Ng01-134G20, 5' end.DH934727|Mus musculus domesticus DNA, BAC clone: B6Ng01-134G20, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctgttttagttctatacctcattttttaattgggtcatttggt
ttgtttgtgtttaatttcttgaattctttatatatttttgatattagttc
tctgtcagatgtagggttgttgataacttttttcacattctatgggctgc
cattttgtcttattgatggtgtgctttgccttacagaagattttcagttt
cctgaggtctcatgtattaattgttgatctcagtacctgagctattggtg
ttcccttcaggtatttgtctcccgtactaatgaattcaaggcagttctcc
actttctcttctattcgatgtaatgcgtctgattttatgttgatgtcttt
aatccacttggacttgagttttctgtatggtgataaatacaggttctgtt
ttcattcttctacatgcagatattcagttagaccagtgctatttactaaa
acactttttcccaatttgagcatctttgtcaaaaatcaagtgttgctagg
tatgtggctttatttctgagtctttaactctattccattgatcaacttgc
ctgtttttatgtcagtactgtgcagttactgaagaaacgtaaaacaaaag
gactctgaagttccatcttgcacctttcagaatagctaagcccaaaaatt
caagtgataaatcatgctcgtgagactacagagaaaggggaaccctcctc
aattgctggtgagagtgaaaatttgtacaatcactttggaaatcaatttg
aaagtttctcagaaaattttgaatagttctacctcaagatccagctatat
tgctcaaggcaatatacctaaaaaatgttccaccacttgctcaactatgt
ttgtagcagctttatttgtaacagacagaaactggaaaaattagatgtct
ctcaactgaagaatggattaaaaaaatgtggtgcatttacaaatgagtac
tacatagctcttaaaactatttgcagcaatggatggaagtagaaaatatc
atcctgatgagtagcccagacatagaaagacaccatgttatgtactcact
taaagttttaacataacagttaaggcataccatgtgacaatccaggaccc
aagaaggatagtataagagccagaagagtgaattcccaggaccgataaag
cattgatgcagacctggagtaaggtggtaggtaacagggttgct
gaattccataactgaaaaagtatggtatgcatacacgaacaagtaggcag
acactggaacagagtgtatgtttcaggaaggaatgtatatacatgtgaca
tttacttttattttagaaaaaaattgtttattgaataaactgcaaataga
gtagcctacatgtcagtaacagaggaatcaatagaccaaagagatttgaa
taggcaaggaaaaacagctcattcaataatgtttagaaaactaactcacc
tctgaggggaaaagaaagtctgcttatattctagacacataacagggaaa
atttcaaattcatttgagtttcaagaaatttgtaaacagtcaaatatgag
aaacacccatagaagaagaaaggttttttttttttcaatttacatgacac
ccagaagctaacttgggaaagaccatgggtataaaaaatagatgtggtat
ggttgggatgtagcttagtagaagaactcttgtatagcatgagtaaggcc
ctgtgtttaatatgtgatgtctacaaatgccaaaataaataaatttagta
aaaatatggccaacaaaatcaaaagataaatatcaaattgagagaaaaat
ggtacaaatttacgtaacacaaaaacattcatccatctagtgagaggaca
gaaaagctggaaggcaaacaggctaaagatatgcaaatttactaaaaaga
tatattaaatcatttaaccagagaaagaaagatttaatacaaatagttct
gagttttgagagcagatattcctgaacttgttgcttagatttataaattg
gataatacaatttctataacagattggtaaagcttacatgttcatataaa
ttctataccatagtgtgcatgattgtgatgtgcttgtagtgatttgctga
tcactaggtaaaacagtgaaaccatagagggatactaaatacacattggt
atctaccattgtgggggtcggtttagtgtaggagaaagcacatggtcaca
ttgaccggaactttcaatacttaatatgtcattgactttaaattataggc
gagtctaccatacaggatctgaactcgctgaaaagat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_74928175_74929269
seq2: B6Ng01-134G20.g_69_1155 (reverse)

seq1  ATCTTTTCAGCGATGTTTCAGAT-CTGTATGTGTAGACTCGCCTATAATT  49
      |||||||||||||   ||||||| ||||||| ||||||||||||||||||
seq2  ATCTTTTCAGCGA--GTTCAGATCCTGTATG-GTAGACTCGCCTATAATT  47

seq1  TTAAAAGTCATTGTACATTAATCAGTATTGAAAGTTCCGGTTCCAATGTG  99
      |  ||||||| || ||| || | ||||||||||||||||||  |||||||
seq2  T--AAAGTCAATG-ACA-TATTAAGTATTGAAAGTTCCGGT--CAATGTG  91

seq1  ACCATGTGCTTTCCTCCTACACTAAACCGA-CCCCACAATGGTAGATACC  148
      |||||||||||| ||||||||||||||||| |||||||||||||||||||
seq2  ACCATGTGCTTT-CTCCTACACTAAACCGACCCCCACAATGGTAGATACC  140

seq1  AATGTGTATTTAGTATCCCTCTATGGTTTCACTGTTTTACCTAGTGATCA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGTATTTAGTATCCCTCTATGGTTTCACTGTTTTACCTAGTGATCA  190

seq1  GCAAATCACTACAAGCACATCACAATCATGCACACTATGGTATAGAATTT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATCACTACAAGCACATCACAATCATGCACACTATGGTATAGAATTT  240

seq1  ATATGAACATGTAAGCTTTACCAATCTGTTATAGAAATTGTATTATCCAA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGAACATGTAAGCTTTACCAATCTGTTATAGAAATTGTATTATCCAA  290

seq1  TTTATAAATCTAAGCAACAAGTTCAGGAATATCTGCTCTCAAAACTCAGA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAAATCTAAGCAACAAGTTCAGGAATATCTGCTCTCAAAACTCAGA  340

seq1  ACTATTTGTATTAAATCTTTCTTTCTCTGGTTAAATGATTTAATATATCT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTTGTATTAAATCTTTCTTTCTCTGGTTAAATGATTTAATATATCT  390

seq1  TTTTAGTAAATTTGCATATCTTTAGCCTGTTTGCCTTCCAGCTTTTCTGT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGTAAATTTGCATATCTTTAGCCTGTTTGCCTTCCAGCTTTTCTGT  440

seq1  CCTCTCACTAGATGGATGAATGTTTTTGTGTTACGTAAATTTGTACCATT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCACTAGATGGATGAATGTTTTTGTGTTACGTAAATTTGTACCATT  490

seq1  TTTCTCTCAATTTGATATTTATCTTTTGATTTTGTTGGCCATATTTTTAC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTCAATTTGATATTTATCTTTTGATTTTGTTGGCCATATTTTTAC  540

seq1  TAAATTTATTTATTTTGGCATTTGTAGACATCACATATTAAACACAGGGC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTTATTTATTTTGGCATTTGTAGACATCACATATTAAACACAGGGC  590

seq1  CTTACTCATGCTATACAAGAGTTCTTCTACTAAGCTACATCCCAACCATA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACTCATGCTATACAAGAGTTCTTCTACTAAGCTACATCCCAACCATA  640

seq1  CCACATCTATTTTTTATACCCATGGTCTTTCCCAAGTTAGCTTCTGGGTG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATCTATTTTTTATACCCATGGTCTTTCCCAAGTTAGCTTCTGGGTG  690

seq1  TCATGTAAATTGAAAAAAAAAAAACCTTTCTTCTTCTATGGGTGTTTCTC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTAAATTGAAAAAAAAAAAACCTTTCTTCTTCTATGGGTGTTTCTC  740

seq1  ATATTTGACTGTTTACAAATTTCTTGAAACTCAAATGAATTTGAAATTTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTGACTGTTTACAAATTTCTTGAAACTCAAATGAATTTGAAATTTT  790

seq1  CCCTGTTATGTGTCTAGAATATAAGCAGACTTTCTTTTCCCCTCAGAGGT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTTATGTGTCTAGAATATAAGCAGACTTTCTTTTCCCCTCAGAGGT  840

seq1  GAGTTAGTTTTCTAAACATTATTGAATGAGCTGTTTTTCCTTGCCTATTC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTAGTTTTCTAAACATTATTGAATGAGCTGTTTTTCCTTGCCTATTC  890

seq1  AAATCTCTTTGGTCTATTGATTCCTCTGTTACTGACATGTAGGCTACTCT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTCTTTGGTCTATTGATTCCTCTGTTACTGACATGTAGGCTACTCT  940

seq1  ATTTGCAGTTTATTCAATAAACAATTTTTTTCTAAAATAAAAGTAAATGT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCAGTTTATTCAATAAACAATTTTTTTCTAAAATAAAAGTAAATGT  990

seq1  CACATGTATATACATTCCTTCCTGAAACATACACTCTGTTCCAGTGTCTG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGTATATACATTCCTTCCTGAAACATACACTCTGTTCCAGTGTCTG  1040

seq1  CCTACTTGTTCGTGTATGCATACCATACTTTTTCAGTTATGGAATTC  1095
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACTTGTTCGTGTATGCATACCATACTTTTTCAGTTATGGAATTC  1087