BAC Information

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BAC

Clone NameB6Ng01-134M22
Chromosome4 (Build37)
Map Location 7,383,476 - 7,411,641
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100039397, LOC100039414, Tox, LOC100039421, LOC666700
Downstream geneCar8, LOC100039494, LOC100039505, LOC100039478
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-134M22.bB6Ng01-134M22.g
ACCDH935011DH935012
length1,041984
definitionDH935011|Mus musculus domesticus DNA, BAC clone: B6Ng01-134M22, 5' end.DH935012|Mus musculus domesticus DNA, BAC clone: B6Ng01-134M22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(7,383,476 - 7,384,532)(7,411,111 - 7,411,641)
sequence
gaattcagatatcatagccattgtttatcaaaacaaaggtttaagcccag
agacatggaagtgtcaagaacagctttgaggtaggttatgtctgcacttc
ttggggtctctcgtactttggactcatagttctactctggatttacggat
agagactcacaaaacgatgtcttccatttagatgcaattttcttttacaa
ggaagtaacagattcctgttttcagagcttctctgtgtctttactttctc
aaaattatcagctcaaaatagtgtttgtgccaaagaggcatattttagca
ttgcatattctttttattgattggagtgtagcatttcatcatcttcttgt
tccaataatcaaatatgttaacatgacatgttgtgctctgtattttatct
taaattttttcttcttttcatcacactgccacgacaattctttcaaaacc
atagctccttaaatgtgacattttaaatcaaagacaattgtcaacagcca
tgactttatatttattaaatatttctttaagataatctatacttaaatga
tattcttataaaagcatgagagtatgaaataaggttataaataaaatttg
gtagcacatcctaaaaaatatgaaccatggaacccttctctgaatataga
tacttcttctactttacaataaatttctgctaacaggagtgataatgaag
actgtatcagtctcattgcggtagtgactttggtcctttggttctacaaa
acagagaaattactggctcataaggcaaatgatcacagatgatttttttt
cagcccagtttatattttctttgcttaaatcccttacctgatctggaaac
ttcaaagaaatcgtgctaattctgctttgttttctttggtctagtttcat
ctgcatcctggtgtcattgccagtaatcccttgacaacctaaactttgtg
tctagcagatgacccttcacattttcaaaacatatatcagatgtgttctg
actgtcacaagtccttctatgtcttgttcactagatgtcat

gaattcctatacataggtgttttcacaaaataaaaaagttatattaacag
agtgaaggagaagggttacagtgaactgattcttccatcaaggaaatgag
aatgatcacacttagcatgctgtacaacttctaagttgtagatagagaac
atatgaattgaaagtgtttcagagctgggaaaatggcttcctcagtaaga
actctgactgtgcaaaactgaagacctgaattcacatctctcacatagct
tgtagagcagtgctagagaggtggagacacaagattttctgaggcttgtt
agcttccaggttagctctataagagctacatgttaataagagaacatgtt
aaaatttaggagaagagtggatggcaccattccttcttgcgtgcgcccga
cttgaccagcaagaacgacgctgcaacaggatccttctgcacacgtttat
tgggagagcttgattgcagaggcaaagagaccccaagcccagaactggtg
ctgcttatataggcctaggagaggcgtgtctcacacccggattggttatg
cactatgcctcatttgcatgttcttcatctgattggctactctctctctg
tacctcacagagcctcattatcatacctcatttgcatgtctcacatctga
ttggttatattctcaaagcctcattatcatgcccgggccaggcagtgtct
ttgcaaaaaactttactgcatatgtacacattggttgtttgtccaaactt
atgcgtggtggccagcagtagtcagtgccactctgcaacggcacatgtgg
cttcccacaattcctaacctaggggctgtgtctaacctctggatatggtc
tctacaggttctccatcccctttgtttggtattttagctaatgttatccc
ttttgggtctgggagcctcttgctttcctggcatctggactctggttgct
acccctagttccctagccctcatgctacatgcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_7383476_7384532
seq2: B6Ng01-134M22.b_48_1088

seq1  GAATTCAGATATCATAGCCATTGTTTATCAAAACAAAGGTTTAAGCCCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGATATCATAGCCATTGTTTATCAAAACAAAGGTTTAAGCCCAG  50

seq1  AGACATGGAAGTGTCAAGAACAGCTTTGAGGTAGGTTATGTCTGCACTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATGGAAGTGTCAAGAACAGCTTTGAGGTAGGTTATGTCTGCACTTC  100

seq1  TTGGGGTCTCTCGTACTTTGGACTCATAGTTCTACTCTGGATTTACGGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGGTCTCTCGTACTTTGGACTCATAGTTCTACTCTGGATTTACGGAT  150

seq1  AGAGACTCACAAAACGATGTCTTCCATTTAGATGCAATTTTCTTTTACAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACTCACAAAACGATGTCTTCCATTTAGATGCAATTTTCTTTTACAA  200

seq1  GGAAGTAACAGATTCCTGTTTTCAGAGCTTCTCTGTGTCTTTACTTTCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTAACAGATTCCTGTTTTCAGAGCTTCTCTGTGTCTTTACTTTCTC  250

seq1  AAAATTATCAGCTCAAAATAGTGTTTGTGCCAAAGAGGCATATTTTAGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTATCAGCTCAAAATAGTGTTTGTGCCAAAGAGGCATATTTTAGCA  300

seq1  TTGCATATTCTTTTTATTGATTGGAGTGTAGCATTTCATCATCTTCTTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCATATTCTTTTTATTGATTGGAGTGTAGCATTTCATCATCTTCTTGT  350

seq1  TCCAATAATCAAATATGTTAACATGACATGTTGTGCTCTGTATTTTATCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAATAATCAAATATGTTAACATGACATGTTGTGCTCTGTATTTTATCT  400

seq1  TAAATTTTTTCTTCTTTTCATCACACTGCCACGACAATTCTTTCAAAACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTTTTTCTTCTTTTCATCACACTGCCACGACAATTCTTTCAAAACC  450

seq1  ATAGCTCCTTAAATGTGACATTTTAAATCAAAGACAATTGTCAACAGCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCTCCTTAAATGTGACATTTTAAATCAAAGACAATTGTCAACAGCCA  500

seq1  TGACTTTATATTTATTAAATATTTCTTTAAGATAATCTATACTTAAATGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTTATATTTATTAAATATTTCTTTAAGATAATCTATACTTAAATGA  550

seq1  TATTCTTATAAAAGCATGAGAGTATGAAATAAGGTTATAAATAAAATTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTTATAAAAGCATGAGAGTATGAAATAAGGTTATAAATAAAATTTG  600

seq1  GTAGCACATCCTAAAAAATATGAACCATGGAACCCTTCTCTGAATATAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCACATCCTAAAAAATATGAACCATGGAACCCTTCTCTGAATATAGA  650

seq1  TACTTCTTCTACTTTACAATAAATTTCTGCTAACAGGAGTGATAATGAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTCTTCTACTTTACAATAAATTTCTGCTAACAGGAGTGATAATGAAG  700

seq1  ACTGTATCAGTCTCATTGCGGTAGTGACTTTGGTCCTTTGGTTCTACAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTATCAGTCTCATTGCGGTAGTGACTTTGGTCCTTTGGTTCTACAAA  750

seq1  ACAGAGAAATTACTGGCTCATAAGGCAAATGATCACAGATGATTTTTTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGAAATTACTGGCTCATAAGGCAAATGATCACAGATGATTTTTTTT  800

seq1  CAGCCCAGTTTATATTTTCTTTGCTTAAATCCCTTACCTGATCTGGAAAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCCAGTTTATATTTTCTTTGCTTAAATCCCTTACCTGATCTGGAAAC  850

seq1  TTCAAAGAAATCGTGCTAATTCTTGCTTTGTTTTCTTTGGTCTAGTTTCA  900
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TTCAAAGAAATCGTGCTAATTC-TGCTTTGTTTTCTTTGGTCTAGTTTCA  899

seq1  TCTGCATCCTGGTGTCAATTGCCAGGTAAATCCCTTGAACAAACCTAAAC  950
      |||||||||||||||| ||||||||   ||||||||||   |||||||||
seq2  TCTGCATCCTGGTGTC-ATTGCCAG--TAATCCCTTGA--CAACCTAAAC  944

seq1  TTTGTGTCTAGCAGATGAACCCTTCACATTTTTCAAAACATATTATCAGA  1000
      ||||||||||||||||| |||||||||| ||||||||||||| |||||| 
seq2  TTTGTGTCTAGCAGATG-ACCCTTCACA-TTTTCAAAACATA-TATCAG-  990

seq1  ATGTGTTCTGACTTGTCACAAGGTCCCTTTCTATGTTCTTGTTTCACTAG  1050
      |||||||||||| |||||||| ||||  ||||||| ||||| ||||||||
seq2  ATGTGTTCTGAC-TGTCACAA-GTCC--TTCTATG-TCTTG-TTCACTAG  1034

seq1  ATGTCAT  1057
      |||||||
seq2  ATGTCAT  1041


seq1: chr4_7411111_7411641
seq2: B6Ng01-134M22.g_66_596 (reverse)

seq1  AGACACGCCTCTCCTAGGCCTATATAAGCAGCACCAGTTCTGGGCTTGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACGCCTCTCCTAGGCCTATATAAGCAGCACCAGTTCTGGGCTTGGG  50

seq1  GTCTCTTTGCCTCTGCAATCAAGCTCTCCCAATAAACGTGTGCAGAAGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTTTGCCTCTGCAATCAAGCTCTCCCAATAAACGTGTGCAGAAGGA  100

seq1  TCCTGTTGCAGCGTCGTTCTTGCTGGTCAAGTCGGGCGCACGCAAGAAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTTGCAGCGTCGTTCTTGCTGGTCAAGTCGGGCGCACGCAAGAAGG  150

seq1  AATGGTGCCATCCACTCTTCTCCTAAATTTTAACATGTTCTCTTATTAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGTGCCATCCACTCTTCTCCTAAATTTTAACATGTTCTCTTATTAAC  200

seq1  ATGTAGCTCTTATAGAGCTAACCTGGAAGCTAACAAGCCTCAGAAAATCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAGCTCTTATAGAGCTAACCTGGAAGCTAACAAGCCTCAGAAAATCT  250

seq1  TGTGTCTCCACCTCTCTAGCACTGCTCTACAAGCTATGTGAGAGATGTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCTCCACCTCTCTAGCACTGCTCTACAAGCTATGTGAGAGATGTGA  300

seq1  ATTCAGGTCTTCAGTTTTGCACAGTCAGAGTTCTTACTGAGGAAGCCATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGGTCTTCAGTTTTGCACAGTCAGAGTTCTTACTGAGGAAGCCATT  350

seq1  TTCCCAGCTCTGAAACACTTTCAATTCATATGTTCTCTATCTACAACTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCAGCTCTGAAACACTTTCAATTCATATGTTCTCTATCTACAACTTA  400

seq1  GAAGTTGTACAGCATGCTAAGTGTGATCATTCTCATTTCCTTGATGGAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTTGTACAGCATGCTAAGTGTGATCATTCTCATTTCCTTGATGGAAG  450

seq1  AATCAGTTCACTGTAACCCTTCTCCTTCACTCTGTTAATATAACTTTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAGTTCACTGTAACCCTTCTCCTTCACTCTGTTAATATAACTTTTTT  500

seq1  ATTTTGTGAAAACACCTATGTATAGGAATTC  531
      |||||||||||||||||||||||||||||||
seq2  ATTTTGTGAAAACACCTATGTATAGGAATTC  531


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