BAC Information

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BAC

Clone NameB6Ng01-134N10
Chromosome4 (Build37)
Map Location 95,218,789 - 95,355,400
singlet/doubletdoublet
Overlap gene2310009E04Rik
Upstream gene5830433M19Rik, Plaa, LOC667250, Lrrc19, Ift74, Tek, 4930579C15Rik, LOC100039252, Mysm1, LOC100039265, LOC665029, Jun, LOC100042411
Downstream geneHook1, Cyp2j13, LOC242546, LOC546837, Cyp2j11, LOC665095, Cyp2j6, Cyp2j9, Cyp2j5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-134N10.bB6Ng01-134N10.g
ACCDH935035DH935036
length1,070727
definitionDH935035|Mus musculus domesticus DNA, BAC clone: B6Ng01-134N10, 5' end.DH935036|Mus musculus domesticus DNA, BAC clone: B6Ng01-134N10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(95,218,789 - 95,219,864)(95,354,674 - 95,355,400)
sequence
gaattcaatactggaacaagtgagtggactatgtaaccctcgtatagctc
ttggaagtaggtagtatcagtcccatttcacagaggaagacactgaagct
gagaacttaaaccatacgactgataggttctggggttaacattcacacct
gatttctattttctttttgatttttaatttttaattctgttgcatgttgc
taaccctttacagtgtgcaggtgagagattgttttatacttcttgtacct
taccaaactccatcttcatgaagacttctcctttaggactgagtggtcca
aagcctcccactctctgcacattgcccagatgtggttgtttgtgttagtg
cctatctccttaggagaaggcttctctgacaatggctgagcaaggcattg
gtctatgtgcacagcagaatgtgactaggactcatttattgctatgttcc
tttaggagaacaagaatatttggttttctgctatgttcacggcctgtcta
gtctcaggttcttttggggaggatccaaggggacttggggtagggaaaac
tataattggaatatattgtatgaaaagaaatattttcaataaaaattaaa
aaccaaacttaacagatcactttattttttatataaagtttatagaatat
ctaagacccttaaatatttgttatcctgcttttagggcaatatatacaat
aactaaggcatcttttaaggcagtagtagatatttctcagtgaaagaata
caatttgaaattgtatatataattattttctgaccatttttgttaattca
ccttaaaatttaccaccatatgacaaagaatccatcttagaagttgttta
atttttattagcatttaacacttttgccacatccagtgtggctccaaggg
atagacctgactagggtggcaagagatgaaaaaaaagaaaaatagacaga
gacacaaaagttggggattgggtggtctgggcattcagatggagaaacaa
cagcatcgcagaagccagtacaaaggttggggaatgtggcaaggggcact
gctcagctcactgctaacat
gaattcaaagaatcttctttttgaaattactcattaattatgataccatt
cccccttccctttcctctctccaagccctccctgataccctcctttgctc
ttcttcaaattcatggtcttttttcattaattgttgttatgtgctcagac
tgaataatggtattgtatatatgtatgtacgtacgtatgtatgtatgcat
gtatgtatgttttcagaactgatcttttggccttaaacaactaattgact
gatgtgctgtcccctggggaagactaacctttcttactttctgtttcatg
ttggttacaaaagagttagggtgcagtcactggtggaaatgaagagctca
tcaaaaccctaaaaagtcacgagagataaaggaacataaagggggaaatg
aagccagtgaagccaaggaaacccacaccgaataaacagaagtgaaggat
acaatataaacttaaaatgaaaacaagggtcaagtcagatactacaagat
tacacagaaaaagaatggcatcaatgtcacaacttactaaaaagagaaaa
ttcaaaatagccttagaagtaaagtaaatacttccagcatatatttttca
atctgatagttcttttttctaaaatatattcataaaaactatgatataac
ttttaaatgttaaaattagttttagaattatttttattaattttatttat
gtatatgtgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_95218789_95219864
seq2: B6Ng01-134N10.b_48_1117

seq1  GAATTCAATACTGGAACAAGTGAGTGGACTATGTAACCCTCGTATAGCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATACTGGAACAAGTGAGTGGACTATGTAACCCTCGTATAGCTC  50

seq1  TTGGAAGTAGGTAGTATCAGTCCCATTTCACAGAGGAAGACACTGAAGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAAGTAGGTAGTATCAGTCCCATTTCACAGAGGAAGACACTGAAGCT  100

seq1  GAGAACTTAAACCATACGACTGATAGGTTCTGGGGTTAACATTCACACCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACTTAAACCATACGACTGATAGGTTCTGGGGTTAACATTCACACCT  150

seq1  GATTTCTATTTTCTTTTTGATTTTTAATTTTTAATTCTGTTGCATGTTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCTATTTTCTTTTTGATTTTTAATTTTTAATTCTGTTGCATGTTGC  200

seq1  TAACCCTTTACAGTGTGCAGGTGAGAGATTGTTTTATACTTCTTGTACCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCCTTTACAGTGTGCAGGTGAGAGATTGTTTTATACTTCTTGTACCT  250

seq1  TACCAAACTCCATCTTCATGAAGACTTCTCCTTTAGGACTGAGTGGTCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAAACTCCATCTTCATGAAGACTTCTCCTTTAGGACTGAGTGGTCCA  300

seq1  AAGCCTCCCACTCTCTGCACATTGCCCAGATGTGGTTGTTTGTGTTAGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTCCCACTCTCTGCACATTGCCCAGATGTGGTTGTTTGTGTTAGTG  350

seq1  CCTATCTCCTTAGGAGAAGGCTTCTCTGACAATGGCTGAGCAAGGCATTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATCTCCTTAGGAGAAGGCTTCTCTGACAATGGCTGAGCAAGGCATTG  400

seq1  GTCTATGTGCACAGCAGAATGTGACTAGGACTCATTTATTGCTATGTTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTATGTGCACAGCAGAATGTGACTAGGACTCATTTATTGCTATGTTCC  450

seq1  TTTAGGAGAACAAGAATATTTGGTTTTCTGCTATGTTCACGGCCTGTCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGGAGAACAAGAATATTTGGTTTTCTGCTATGTTCACGGCCTGTCTA  500

seq1  GTCTCAGGTTCTTTTGGGGAGGATCCAAGGGGACTTGGGGTAGGGAAAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCAGGTTCTTTTGGGGAGGATCCAAGGGGACTTGGGGTAGGGAAAAC  550

seq1  TATAATTGGAATATATTGTATGAAAAGAAATATTTTCAATAAAAATTAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATTGGAATATATTGTATGAAAAGAAATATTTTCAATAAAAATTAAA  600

seq1  AACCAAACTTAACAGATCACTTTATTTTTTATATAAAGTTTATAGAATAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAAACTTAACAGATCACTTTATTTTTTATATAAAGTTTATAGAATAT  650

seq1  CTAAGACCCTTAAATATTTGTTATCCTGCTTTTAGGGCAATATATACAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGACCCTTAAATATTTGTTATCCTGCTTTTAGGGCAATATATACAAT  700

seq1  AACTAAGGCATCTTTTAAGGCAGTAGTAGATATTTCTCAGTGAAAGAATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAAGGCATCTTTTAAGGCAGTAGTAGATATTTCTCAGTGAAAGAATA  750

seq1  CAATTTGAAATTGTATATATAATTATTTTCTGACCATTTTTGTTAATTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTGAAATTGTATATATAATTATTTTCTGACCATTTTTGTTAATTCA  800

seq1  CCTTAAAATTTACCACCATATGACAAAGAATCCATCTTAGAAGTTGTTTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAAAATTTACCACCATATGACAAAGAATCCATCTTAGAAGTTGTTTA  850

seq1  ATTTTTATTAGCATTTAACACTTTTGCCACATCCAGTGTGGCTCCAAGGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTATTAGCATTTAACACTTTTGCCACATCCAGTGTGGCTCCAAGGG  900

seq1  ATAGACCTGACTAGGGTGGCAAGAGAATGAAAAAAAAAGATAAATAGACA  950
      ||||||||||||||||||||||||| ||| |||||||||| |||||||||
seq2  ATAGACCTGACTAGGGTGGCAAGAG-ATG-AAAAAAAAGAAAAATAGACA  948

seq1  GAGACACAAAAAGTTGGGGATTGGGTGGTCTGGGCATTCAGATGGAGAAA  1000
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAC-AAAAGTTGGGGATTGGGTGGTCTGGGCATTCAGATGGAGAAA  997

seq1  CAACAGCATCGCAGAAGCCAAGTACAAAAGGGTGGGGAATGTGGC-AGGG  1049
      ||||||||||||||||||| ||||| ||||| ||||||||||||| ||||
seq2  CAACAGCATCGCAGAAGCC-AGTAC-AAAGGTTGGGGAATGTGGCAAGGG  1045

seq1  GCACTGCTTCAGCCTCACTGCTAACAT  1076
      ||||||| |||| ||||||||||||||
seq2  GCACTGC-TCAG-CTCACTGCTAACAT  1070

seq1: chr4_95354674_95355400
seq2: B6Ng01-134N10.g_68_794 (reverse)

seq1  CACACACACACACACACACACATATACATAAATAAAATTAATAAAAATAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACATATACATAAATAAAATTAATAAAAATAA  50

seq1  TTCTAAAACTAATTTTAACATTTAAAAGTTATATCATAGTTTTTATGAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAAAACTAATTTTAACATTTAAAAGTTATATCATAGTTTTTATGAAT  100

seq1  ATATTTTAGAAAAAAGAACTATCAGATTGAAAAATATATGCTGGAAGTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTAGAAAAAAGAACTATCAGATTGAAAAATATATGCTGGAAGTAT  150

seq1  TTACTTTACTTCTAAGGCTATTTTGAATTTTCTCTTTTTAGTAAGTTGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTTACTTCTAAGGCTATTTTGAATTTTCTCTTTTTAGTAAGTTGTG  200

seq1  ACATTGATGCCATTCTTTTTCTGTGTAATCTTGTAGTATCTGACTTGACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGATGCCATTCTTTTTCTGTGTAATCTTGTAGTATCTGACTTGACC  250

seq1  CTTGTTTTCATTTTAAGTTTATATTGTATCCTTCACTTCTGTTTATTCGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTTTCATTTTAAGTTTATATTGTATCCTTCACTTCTGTTTATTCGG  300

seq1  TGTGGGTTTCCTTGGCTTCACTGGCTTCATTTCCCCCTTTATGTTCCTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGTTTCCTTGGCTTCACTGGCTTCATTTCCCCCTTTATGTTCCTTT  350

seq1  ATCTCTCGTGACTTTTTAGGGTTTTGATGAGCTCTTCATTTCCACCAGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTCGTGACTTTTTAGGGTTTTGATGAGCTCTTCATTTCCACCAGTG  400

seq1  ACTGCACCCTAACTCTTTTGTAACCAACATGAAACAGAAAGTAAGAAAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCACCCTAACTCTTTTGTAACCAACATGAAACAGAAAGTAAGAAAGG  450

seq1  TTAGTCTTCCCCAGGGGACAGCACATCAGTCAATTAGTTGTTTAAGGCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTCTTCCCCAGGGGACAGCACATCAGTCAATTAGTTGTTTAAGGCCA  500

seq1  AAAGATCAGTTCTGAAAACATACATACATGCATACATACATACGTACGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATCAGTTCTGAAAACATACATACATGCATACATACATACGTACGTA  550

seq1  CATACATATATACAATACCATTATTCAGTCTGAGCACATAACAACAATTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACATATATACAATACCATTATTCAGTCTGAGCACATAACAACAATTA  600

seq1  ATGAAAAAAGACCATGAATTTGAAGAAGAGCAAAGGAGGGTATCAGGGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAAAAGACCATGAATTTGAAGAAGAGCAAAGGAGGGTATCAGGGAG  650

seq1  GGCTTGGAGAGAGGAAAGGGAAGGGGGAATGGTATCATAATTAATGAGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTGGAGAGAGGAAAGGGAAGGGGGAATGGTATCATAATTAATGAGTA  700

seq1  ATTTCAAAAAGAAGATTCTTTGAATTC  727
      |||||||||||||||||||||||||||
seq2  ATTTCAAAAAGAAGATTCTTTGAATTC  727