BAC Information

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BAC

Clone NameB6Ng01-135B12
Chromosome4 (Build37)
Map Location 142,928,129 - 142,928,947
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC546484, 6330411D24Rik, Prdm2, LOC666018, EG626575, LOC433776, Pdpn
Downstream geneLrrc38, LOC621961, Pramel1, 4732496O08Rik, Oog4, LOC666015, LOC626700, OTTMUSG00000010207, LOC100040854, LOC100040861, BC080695, LOC666049, LOC279185, LOC277668, LOC100040924, OTTMUSG00000010333, LOC277666, OTTMUSG00000010009, OTTMUSG00000010328, OTTMUSG00000010433, LOC195555, LOC194224, LOC626889, LOC329984, LOC626922, LOC626943, LOC100041127, LOC436146, Pramel4, LOC100041077, LOC100041144, Oog3, Oog2, C87977, Pramel5, LOC666150, LOC626995
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-135B12.bB6Ng01-135B12.g
ACCDH935222DH935223
length1,279819
definitionDH935222|Mus musculus domesticus DNA, BAC clone: B6Ng01-135B12, 5' end.DH935223|Mus musculus domesticus DNA, BAC clone: B6Ng01-135B12, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctaccagagttttgaagaagagttaaagccaacatttctaaaata
attccccaaaatagaaacagaagaaacattgccaaattcattttatgagg
ccacactcacccagatacccaaagcacaaaatgaatcaacaaaagaagaa
agaaaaaaaaaagaactactgggcaattttccttatgaacatagatgtaa
agctactcaataaaatactcacaaacagaatccaagtaactatcaaaaag
attatcaccatgatcaaataagcttcatcccagagattcagggatgattc
aacacatgaaaaacagtctgttgtaatctaccatataaacaaacagaaag
aaaaatcccatgttcatcttattagattccaaaaaagccttagacaaaat
tcaacacccctttatgataaaagtcttggagaacttagggatacacggga
catacctaaatgtagccatccagcagccacgggtgaactgggcttacctg
aaaggagggctggaaataaggtaagggggtgagagaaggatgaggccaaa
acaaaggttctgatcaaggctcaaaatttaataataagctttacatttgt
cttagttggggttttacttctgtgaacagataccatgaccaaagcaagtc
ttataaaaacaacatttaattggagctggcttacaggttcagaggttcag
tccattatcatcaaggtaggagcatggcagtatccaggcaggcatagcgc
aggaggagctgagagttctacatcttcatccaaaggctgctagtggaaga
ctgacttccaggcaactagggtgagagcttaagcccacacccacagtgac
acacttattccaaccaggtcacacctattccaacaaggccatacctccag
atgatgccactccctggtccaagaatatacaaaccatcgcacattaataa
agggaaaaccaccttccctgtcactattgaactttactgagaatgatctt
cttttgtctctctaagtgctcagaagggttccttagagacccttgcaatc
acacaatgcaagctgtcaattccaatatgagttgtctgtccagtgtccaa
tagtcatcagctcagcacctagaacctgatggttcacctttgaaatttag
tcatggaacttctaggagacgttaaagattgagcctcaattaccgaagct
gattgaagggtgattgctatatcatgggtcctcaactgaattccctcgcc
tctctggaccgatagtctccgctagtcgt
gaattccaggacagccaggaatatatagtgaggccctggtttataaacaa
taagggggctggacaggacagactcagtttctccaagttgttcttttaag
ttgaaaggccacaaaagtcacttcacatggcagggaaagtcctgagaagc
caaacagctgctctctgtaggtgtgtccagccgtgaccttgaccctggtt
gctatccgacttaacctgttctaaggaaccttatggaactgaacccagag
ggaacgcgtgtcctttcatgaccacagactggaggctaaagtgcgatcat
gacttcaccagcgcagccgagctgttcccttcacctttgaaagggagctc
ggctttccagagcctgagttctgcacttgggagagagatcaaactgggac
aatgagaaccagggaacaggacggggaaggacagagaggctgagagagcc
gaggctttggacaccgcagggaggtggggtctggagccgggaaccactga
gcagacccaaggaagctacaggcaagagtggtgggggctggttacctgga
tctaatgttattcaagtgttattgacaaacggcatatattttaatgattt
taggctacaggatgctatttctagagtttgacatcatagagactctgcct
gagttcccagactctaatcacattttctctaagacaggggtcttcgctga
gcatgtgcagtgtacctcaggggactcatggcttaaggttgaagacggac
attagagccaactcacagctctgtgaggccggaagaccaccaagcattta
gagaaggatgggggggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_142928129_142928947
seq2: B6Ng01-135B12.g_69_887

seq1  GAATTCCAGGACAGCCAGGAATATATAGTGAGGCCCTGGTTTATAAACAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGACAGCCAGGAATATATAGTGAGGCCCTGGTTTATAAACAA  50

seq1  TAAGGGGGCTGGACAGGACAGACTCAGTTTCTCCAAGTTGTTCTTTTAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGGGGCTGGACAGGACAGACTCAGTTTCTCCAAGTTGTTCTTTTAAG  100

seq1  TTGAAAGGCCACAAAAGTCACTTCACATGGCAGGGAAAGTCCTGAGAAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAGGCCACAAAAGTCACTTCACATGGCAGGGAAAGTCCTGAGAAGC  150

seq1  CAAACAGCTGCTCTCTGTAGGTGTGTCCAGCCGTGACCTTGACCCTGGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAGCTGCTCTCTGTAGGTGTGTCCAGCCGTGACCTTGACCCTGGTT  200

seq1  GCTATCCGACTTAACCTGTTCTAAGGAACCTTATGGAACTGAACCCAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATCCGACTTAACCTGTTCTAAGGAACCTTATGGAACTGAACCCAGAG  250

seq1  GGAACGCGTGTCCTTTCATGACCACAGACTGGAGGCTAAAGTGCGATCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACGCGTGTCCTTTCATGACCACAGACTGGAGGCTAAAGTGCGATCAT  300

seq1  GACTTCACCAGCGCAGCCGAGCTGTTCCCTTCACCTTTGAAAGGGAGCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTCACCAGCGCAGCCGAGCTGTTCCCTTCACCTTTGAAAGGGAGCTC  350

seq1  GGCTTTCCAGAGCCTGAGTTCTGCACTTGGGAGAGAGATCAAACTGGGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTTCCAGAGCCTGAGTTCTGCACTTGGGAGAGAGATCAAACTGGGAC  400

seq1  AATGAGAACCAGGGAACAGGACGGGGAAGGACAGAGAGGCTGAGAGAGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGAACCAGGGAACAGGACGGGGAAGGACAGAGAGGCTGAGAGAGCC  450

seq1  GAGGCTTTGGACACCGCAGGGAGGTGGGGTCTGGAGCCGGGAACCACTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCTTTGGACACCGCAGGGAGGTGGGGTCTGGAGCCGGGAACCACTGA  500

seq1  GCAGACCCAAGGAAGCTACAGGCAAGAGTGGTGGGGGCTGGTTACCTGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGACCCAAGGAAGCTACAGGCAAGAGTGGTGGGGGCTGGTTACCTGGA  550

seq1  TCTAATGTTATTCAAGTGTTATTGACAAACGGCATATATTTTAATGATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAATGTTATTCAAGTGTTATTGACAAACGGCATATATTTTAATGATTT  600

seq1  TAGGCTACAGGATGCTATTTCTAGAGTTTGACATCATAGAGACTCTGCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCTACAGGATGCTATTTCTAGAGTTTGACATCATAGAGACTCTGCCT  650

seq1  GAGTTCCCAGACTCTAATCACATTTTCTCTAAGACAGGGGTCTTCGCTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTCCCAGACTCTAATCACATTTTCTCTAAGACAGGGGTCTTCGCTGA  700

seq1  GCATGTGCAGTGTACCTCAGGGGACTCATGGCTTAAGGTTGAAGACGGAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGTGCAGTGTACCTCAGGGGACTCATGGCTTAAGGTTGAAGACGGAC  750

seq1  ATTAGAGCCAACTCACAGCTCTGTGAGGCCGGAAGACCACCAAGCATTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGAGCCAACTCACAGCTCTGTGAGGCCGGAAGACCACCAAGCATTTA  800

seq1  GAGAAGGATGGGGGGGGGG  819
      |||||||||||||||||||
seq2  GAGAAGGATGGGGGGGGGG  819