BAC Information

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BAC

Clone NameB6Ng01-136B15
Chromosome4 (Build37)
Map Location 121,589,122 - 121,590,192
singlet/doubletsinglet
Overlap genenone
Upstream gene3110037I16Rik, Zfp69, Smap1l, Col9a2, Zmpste24, Tmco2, LOC100042174, Rlf, OTTMUSG00000008911, EG666914, LOC666921, LOC666927
Downstream geneLOC666931, LOC666937, LOC633269, LOC633279, 9530002B09Rik, Ppt1, Cap1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-136B15.bB6Ng01-136B15.g
ACCDH935968DH935969
length9521,065
definitionDH935968|Mus musculus domesticus DNA, BAC clone: B6Ng01-136B15, 5' end.DH935969|Mus musculus domesticus DNA, BAC clone: B6Ng01-136B15, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaagtactatattgaataggtagggaaataatgagcagccttgta
tagtccctgattttagtgggattgcttcaaatttctctcactttagtttg
atgttggctactggtttgctgtagattgcttttattatgtttagggtatg
ggccttgaattcctaattcgtccaagaaatttatcattaatgggtgttga
attttgtcaaaagctttctcagcatctaataatatgatcatgtggttttt
ctctttaattttgtttatgtagtagattacgttgatggtttactggttat
taaaccatccctgcatccctagaatgaagtctacttgatcatgcaggatg
atcattttgatgtgtacttgcatttggttttcaagaattttgttatatat
attttgcatccatattcataagggaaattggtctaacattctatttttgt
tgggtctttgtggggtttaggtatcagagtaattgtgacttcatagaatg
aattgggtatagttccttctgtttctattttgtggaatagattgaggaga
attggaattaggtcttctttgaaagtctgatagaactctccactaaaccc
atctagctctggctgggttttttttttttttttttttggttgggatacta
ttaatgactactttgaattctttagaggatatgggactgtttagatcatt
aatctagtcctgatttaacttttggtacttggtatctgtctagaaaattg
ttcctttcatccagggttttccagttttgttgagtatagtcttctgtagt
tggatctgatgtgtttgggatttcctcagattctggttgctatgtttctc
tttaatttctgatttgttaattagaatactgtcctggcctctagttgtcg
ggctaagtgttatcatctggcgatttttcaaagaaccactgctggttgat
tc
gaattccagatattttttgtgcctacaatgtttatgttcttatagaaaca
gtggtttagctgcaataaacaaggctttttaatattaatatccctttcta
ttatattgttttgcaaagttgaattttacaagttgctgctggtgggctgg
atcgatggcttgttagtctagagaacagaagatctgggttcagttcccaa
taaccacatgaaaatttacaactctttgttactccagttccagtggacct
gagattctcttctggtcactgtggctactgcacacaagtggtacataggc
acccatgtagaaaaaccacttatatgtagtgagaaattggtttctttgaa
aacatagaagtattatatgactatgttataattttaatcccaagtttggg
atatggactagttcagattatccatagcagataactatgaattgcctcct
cttatagaacgggggtaatttttcagctgccggtagtttttgcagtggtg
tgccattttggactcagtggacttttcacagggtatagaaatgctggggc
cctcacagccaaagggaatagttgctgttgttcatgttggtgtgcaaagg
agcaacaacaaacagaagaaagtacaaatcctgatggtgaagataaactg
cctctaaggaatcagcaggaagtaatctatcaataaattcaccctgtttc
ctttctgtacttttcccctttcatatttattgttaggagtttgaaatggt
gggggaaaggaagaagaagaaataatttcctgcaaagtacccaaagacta
gctacacccatacacacaaagtaaaatattaaaatacttgttttaaaagt
atatttgactcatgattttccatccttgtttttgatggccaggagaaaca
ataagtaattatgggactaaatgatgtttaaatgaatagagctggaagct
tatgttccatctgtgagatgagaaggctgtgatgaggtaggatgccaact
tggtccctgtagagttgctgtgggggtgattgaaagacctattaggaatg
tttcccctaacaaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_121589122_121590192
seq2: B6Ng01-136B15.g_67_1131

seq1  GAATTCCAGATATTTTTTGTGCCTACAATGTTTATGTTCTTATAGAAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGATATTTTTTGTGCCTACAATGTTTATGTTCTTATAGAAACA  50

seq1  GTGGTTTAGCTGCAATAAACAAGGCTTTTTAATATTAATATCCCTTTCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTTTAGCTGCAATAAACAAGGCTTTTTAATATTAATATCCCTTTCTA  100

seq1  TTATATTGTTTTGCAAAGTTGAATTTTACAAGTTGCTGCTGGTGGGCTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATTGTTTTGCAAAGTTGAATTTTACAAGTTGCTGCTGGTGGGCTGG  150

seq1  ATCGATGGCTTGTTAGTCTAGAGAACAGAAGATCTGGGTTCAGTTCCCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGATGGCTTGTTAGTCTAGAGAACAGAAGATCTGGGTTCAGTTCCCAA  200

seq1  TAACCACATGAAAATTTACAACTCTTTGTTACTCCAGTTCCAGTGGACCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCACATGAAAATTTACAACTCTTTGTTACTCCAGTTCCAGTGGACCT  250

seq1  GAGATTCTCTTCTGGTCACTGTGGCTACTGCACACAAGTGGTACATAGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATTCTCTTCTGGTCACTGTGGCTACTGCACACAAGTGGTACATAGGC  300

seq1  ACCCATGTAGAAAAACCACTTATATGTAGTGAGAAATTGGTTTCTTTGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCATGTAGAAAAACCACTTATATGTAGTGAGAAATTGGTTTCTTTGAA  350

seq1  AACATAGAAGTATTATATGACTATGTTATAATTTTAATCCCAAGTTTGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATAGAAGTATTATATGACTATGTTATAATTTTAATCCCAAGTTTGGG  400

seq1  ATATGGACTAGTTCAGATTATCCATAGCAGATAACTATGAATTGCCTCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGGACTAGTTCAGATTATCCATAGCAGATAACTATGAATTGCCTCCT  450

seq1  CTTATAGAACGGGGGTAATTTTTCAGCTGCCGGTAGTTTTTGCAGTGGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATAGAACGGGGGTAATTTTTCAGCTGCCGGTAGTTTTTGCAGTGGTG  500

seq1  TGCCATTTTGGACTCAGTGGACTTTTCACAGGGTATAGAAATGCTGGGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATTTTGGACTCAGTGGACTTTTCACAGGGTATAGAAATGCTGGGGC  550

seq1  CCTCACAGCCAAAGGGAATAGTTGCTGTTGTTCATGTTGGTGTGCAAAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCACAGCCAAAGGGAATAGTTGCTGTTGTTCATGTTGGTGTGCAAAGG  600

seq1  AGCAACAACAAACAGAAGAAAGTACAAATCCTGATGGTGAAGATAAACTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAACAACAAACAGAAGAAAGTACAAATCCTGATGGTGAAGATAAACTG  650

seq1  CCTCTAAGGAATCAGCAGGAAGTAATCTATCAATAAATTCACCCTGTTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTAAGGAATCAGCAGGAAGTAATCTATCAATAAATTCACCCTGTTTC  700

seq1  CTTTCTGTACTTTTCCCCTTTCATATTTATTGTTAGGAGTTTGAAATGGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTGTACTTTTCCCCTTTCATATTTATTGTTAGGAGTTTGAAATGGT  750

seq1  GGGGGAAAGGAAGAAGAAGAAATAATTTCCTGCAAAGTACCCAAAGACTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGAAAGGAAGAAGAAGAAATAATTTCCTGCAAAGTACCCAAAGACTA  800

seq1  GCTACACCCATACACACAAAGTAAAATATT-AAATACTTGTTTTAAAAGT  849
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  GCTACACCCATACACACAAAGTAAAATATTAAAATACTTGTTTTAAAAGT  850

seq1  AATATTTTGACTCATGATTTTCCATCCTTGTTTTTGATGGCCAGGAGAAA  899
       ||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  -ATA-TTTGACTCATGATTTTCCATCCTTGTTTTTGATGGCCAGGAGAAA  898

seq1  CAATAAGTATGTATGGCACTAAAATGATGTTTCAAATGAATAGAGCTGG-  948
      |||||||||  ||||| ||| ||||||||||| |||||||||||||||| 
seq2  CAATAAGTAATTATGGGACT-AAATGATGTTT-AAATGAATAGAGCTGGA  946

seq1  AGCTTATGTTCCATCTGTTGAGATTGAGAAGCCTGTGATGGAGGTAAGAT  998
      ||||||||||||||||| ||||| ||||||| ||||||| |||||| |||
seq2  AGCTTATGTTCCATCTG-TGAGA-TGAGAAGGCTGTGAT-GAGGTAGGAT  993

seq1  GCCAACTTGGTCCCTGTAGAGTTTGCTGTGGGGTTGATTAGAGAACGCTA  1048
      ||||||||||||||||||||| ||||||||||| ||||| || |   |||
seq2  GCCAACTTGGTCCCTGTAGAG-TTGCTGTGGGGGTGATT-GAAAGACCTA  1041

seq1  -TATGAATGTTTCCCCTTACAAAA  1071
       || ||||||||||||| |||| |
seq2  TTAGGAATGTTTCCCCTAACAACA  1065