BAC Information

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BAC

Clone NameB6Ng01-136F10
Chromosome4 (Build37)
Map Location 146,994,236 - 147,136,718
singlet/doubletdoublet
Overlap geneLOC666618, LOC100043100, LOC666640, LOC194189, LOC666652, LOC100041677
Upstream geneOTTMUSG00000010105, LOC666445, MGC117846, OTTMUSG00000010694, LOC626480, LOC666474, LOC666482, LOC434514, LOC626288, LOC666498, LOC100043034, LOC666514, LOC100041561, LOC100041570, OTTMUSG00000010657, LOC384087, LOC666546, LOC666557, LOC545716, LOC666574, LOC666581, EG666588, LOC627701, OTTMUSG00000010671, LOC545718, OTTMUSG00000010673, 2610305D13Rik
Downstream geneLOC277692, MGC67181, D4Wsu114e, Fv1, Mfn2, Plod1, 2510039O18Rik, Nppb, Nppa, Clcn6, Mthfr, LOC433806, Agtrap, 2610109H07Rik, Mad2l2, Fbxo6, Fbxo44, Fbxo2, Ptchd2, Ubiad1, Frap1, Angptl7, Exosc10, LOC100043151, Srm, Masp2, Tardbp, Gm572, LOC100041733, LOC100041742
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-136F10.bB6Ng01-136F10.g
ACCDH936136DH936137
length8361,083
definitionDH936136|Mus musculus domesticus DNA, BAC clone: B6Ng01-136F10, 5' end.DH936137|Mus musculus domesticus DNA, BAC clone: B6Ng01-136F10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(146,994,236 - 146,994,860)(147,135,593 - 147,136,718)
sequence
gaattcactctgtagacctggctggccttgaactcagaaatccgcctgcc
tctgcctcccaagtgctgggattaaaggcatgcaccaccaccgcctggct
tactatcacttgctatatcaaatatttttaaagtagacaaaggtcaaata
gctatatgtattggtcagacaaggccataaccttctcatctgtggggaat
tgcaggctggtctccagttgagctgaggtctgaaccccggtggtcataat
tcacctacatgacacagtaggcgttccctcatgctcctggaactcaggcc
cctgcataaggcacaacctcccacagcccccacaagagaagcatggtcag
tagtcaagtaagcaatggcccaagcttctgaccttcaggctaaactcctc
cccagttacctagcaacagtgaagaccataaaaaggtatgctcagccccc
accttgctctctctcactcctttgtcctctaacctctcacttctctcttc
ttttccctttctctttgtcttctctctctatctttgctctctcctctcct
ctactatccttctcctccctcccctccaattctctctctctccctctccc
ttctctctttccccctgcatttctctaataaagctcttaaaccatagagt
ctctgctccttaaagttccgctgggcactgtggacagtgttgagaaattc
ttcccttttccctctctcccacaaccctgctggctttagcaaagtagctg
ggggggggggcgtccccaggtaggccttccccttgaccaccccctgaaga
gtgggagagaggaatacccacccagggatgagtgaa
gaattctctctctgaaaggtaaccttaaatccaatcagaatatgttttac
tgtaattggtttttgtctgctgctttcataaagcaccatgttcaaggaaa
ctaatagaagaaaaagactactttgggtaatgcttccagaggatagccat
caaccatgacagggaggacagatagaacattgccatgttgttgaagtaga
aaggtgaaagatcacatcttcaaccccagtcactaaagaggaagaaagaa
ttaagatggcttggatctatctattctttcttctcatagccaacccccat
gtcatacttaattcagtaatgttccaacagctaaattcctcaaacgattg
tgacccactgaggacccaactttaaaagataaaagtattatccaatagga
gaatcagccttctaatatccttgtactttttaaattgattttgatatcaa
tgtagaagacaaaactctaattttttgtatgggtttcctgtttgtttgtt
tgtaaaacagggtcccacactctatttctaactttcacatgtcctgatat
agagaccagaatggcttttaggtcacatccctgacagctaggatgaaaga
cctttcgttgacgagctgattttttgtttgtttgtttgaatggtgtatct
tcacatattggccattgagttaccaccaggcttacagaatttatttcaga
gtgagcattccttagatttttatatctctggataagatgttcacatcctg
cacatgtataattattctcttacccacttgtaggaattctctggaatttc
attaagtttgtttctgccttctttgaattcctgtgcttgttccctcttta
tgacatttgtccacattgaatggtgttcatattatattttgagttttgtt
tcatattcattttgtcatgagatttggtattgcatttagttgatttgggg
tagggaaattttattaacattttcaattgctttagctacagctctcaatt
ttctttgctgtgtgtcattagtcatgtgacaggatttctatgagggttgc
gaatacttggaattctagggtggggggaagaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_146994236_146994860
seq2: B6Ng01-136F10.b_44_651

seq1  GAATTCACTCTATAGACCTGGCTGGCCTCGAACTCAGGAATCCGCTTGCC  50
      ||||||||||| |||||||||||||||| |||||||| ||||||| ||||
seq2  GAATTCACTCTGTAGACCTGGCTGGCCTTGAACTCAGAAATCCGCCTGCC  50

seq1  TCTGCCTCCCAAGTGCTGGGATTAAAGGCATGCAACACCACCGCCTGGCT  100
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TCTGCCTCCCAAGTGCTGGGATTAAAGGCATGCACCACCACCGCCTGGCT  100

seq1  TACTATCACTTGCTATATCAAATATTTTTAAAGTAGACAAAGGTCAAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTATCACTTGCTATATCAAATATTTTTAAAGTAGACAAAGGTCAAATA  150

seq1  GCTATATGTATTGGTCAGACAAGGCCATAACCTTCTCATCTGTGGGGAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATATGTATTGGTCAGACAAGGCCATAACCTTCTCATCTGTGGGGAAT  200

seq1  TGCAGGCTGGTCTCCAGTCGAGCTGAGGTCTGAACCCCGATGGTCATAAT  250
      |||||||||||||||||| |||||||||||||||||||| ||||||||||
seq2  TGCAGGCTGGTCTCCAGTTGAGCTGAGGTCTGAACCCCGGTGGTCATAAT  250

seq1  TCACCTACATGACACAGTAGGCATTCCCTCATGCTCCTGGAACTCAGGCC  300
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TCACCTACATGACACAGTAGGCGTTCCCTCATGCTCCTGGAACTCAGGCC  300

seq1  CCTGCATAAGGCACAACCTCCCACAGCCCCCACAAGAGAAGCATGGTCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCATAAGGCACAACCTCCCACAGCCCCCACAAGAGAAGCATGGTCAG  350

seq1  TAGTCAAGTAAGCAATGGCCCAAGCTTCTGACCTTCAGGCTAAACTCCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCAAGTAAGCAATGGCCCAAGCTTCTGACCTTCAGGCTAAACTCCTC  400

seq1  CCCAGTTACCTAGCAACAGTGAAGACCATAAAAAGGTGTGCTCAGCCCCC  450
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CCCAGTTACCTAGCAACAGTGAAGACCATAAAAAGGTATGCTCAGCCCCC  450

seq1  ACCTTGCTCTCTCTCACTCCTTTGTCCTCTAACCTCTCACTTCTCTCTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTGCTCTCTCTCACTCCTTTGTCCTCTAACCTCTCACTTCTCTCTTC  500

seq1  TTTTCCCTTTCTC--TGTCTTCTCTCTCCTCTCTCCTTTATCTTTGTTCT  548
      |||||||||||||  |||||||||||||          |||||||| |||
seq2  TTTTCCCTTTCTCTTTGTCTTCTCTCTC----------TATCTTTGCTCT  540

seq1  CTCCTCTCCTCTACTATCCTTCTCCTCCCTCCCCTCCTCTTCTCTCTCTC  598
      |||||||||||||||||||||||||||||||||||||  |||||||||||
seq2  CTCCTCTCCTCTACTATCCTTCTCCTCCCTCCCCTCCAATTCTCTCTCTC  590

seq1  TCTCTCTCTCCCTCTCTCCCTCTCTCT  625
      || |||||         || |||||||
seq2  TCCCTCTC---------CCTTCTCTCT  608

seq1: chr4_147135593_147136718
seq2: B6Ng01-136F10.g_66_1148 (reverse)

seq1  GTTCCTCCCACCACCCTAGATTCTCAAAGTTTATTCACAACACCTCATAT  50
      |||| |||| |||||||||| | || |||  ||||| |||| ||||||| 
seq2  GTTCTTCCCCCCACCCTAGAAT-TCCAAG--TATTCGCAAC-CCTCATA-  45

seq1  GGAAATCCCTGTCACCTGACCTAAATGACACACAGCAAAAGAAAATTGAG  100
       ||||| |||||||| ||||   ||||||||||||| |||||||||||||
seq2  -GAAAT-CCTGTCACATGAC--TAATGACACACAGC-AAAGAAAATTGAG  90

seq1  AGGCTGTAGCTAAAGCAATTTGAAAATGTTAATAAAATTTCCCTACCCCA  150
      | |||||||||||||||| |||||||||||||||||||||||||||||||
seq2  A-GCTGTAGCTAAAGCAA-TTGAAAATGTTAATAAAATTTCCCTACCCCA  138

seq1  AATC-ACT-AATGCAATACCAATTCTCATGACAAAATGAATTATGAAAC-  197
      |||| ||| ||||||||||||| ||||||||||||||||| |||||||| 
seq2  AATCAACTAAATGCAATACCAAATCTCATGACAAAATGAA-TATGAAACA  187

seq1  AAACTCAAAATATAATATGAACACCATTCAATGTGGACAAATGTCATAAA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCAAAATATAATATGAACACCATTCAATGTGGACAAATGTCATAAA  237

seq1  GAGGGAACAAGCACAGGAATTCAAAGAAGGCAGAAACAAACTTAATGAAA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGAACAAGCACAGGAATTCAAAGAAGGCAGAAACAAACTTAATGAAA  287

seq1  TTCCAGAGAATTCCTTCAAGTGGGTAAGAGAATAATTATACATGTGCAGG  347
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TTCCAGAGAATTCCTACAAGTGGGTAAGAGAATAATTATACATGTGCAGG  337

seq1  ATGTGAACATCTTATCCAGAGATATAAAAATCTAAGGAATGCTCACTCTG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGAACATCTTATCCAGAGATATAAAAATCTAAGGAATGCTCACTCTG  387

seq1  AAATAAATTCTGTAAGCCTGGTGGTAACTCAATGGCCAATATGTGAAGAT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAATTCTGTAAGCCTGGTGGTAACTCAATGGCCAATATGTGAAGAT  437

seq1  ACACCATTCAAACAAACAAACAAACAAACAAACAAACAAAAAATCAGCTC  497
      ||||||||                ||||||||||||||||||||||||||
seq2  ACACCATT----------------CAAACAAACAAACAAAAAATCAGCTC  471

seq1  GTCAAAGAAAGGTCTTTCATCCTAGCTGTCAGGGATGTAACCTAAAAGCC  547
      ||||| |||||||||||||||||||||||||||||||| |||||||||||
seq2  GTCAACGAAAGGTCTTTCATCCTAGCTGTCAGGGATGTGACCTAAAAGCC  521

seq1  ATTCTGGTCTCTATATAAGGACATGTGAAAGTTAGAAATAGAGTGTGGGA  597
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  ATTCTGGTCTCTATATCAGGACATGTGAAAGTTAGAAATAGAGTGTGGGA  571

seq1  CCCTGTTTTACAAACAAACAAACACACAAACAAACAAACAGGAAACCCAT  647
      |||||||||                |||||||||||||||||||||||||
seq2  CCCTGTTTT----------------ACAAACAAACAAACAGGAAACCCAT  605

seq1  ACAAAAAATTAGAGCTTTGTCTTCTACATTGATATCAAAATCAATTTTAA  697
      |||||||||||||| |||||||||||||||||||||||||||||||| ||
seq2  ACAAAAAATTAGAGTTTTGTCTTCTACATTGATATCAAAATCAATTTAAA  655

seq1  AAGTACAAGGATATTAGAAGGCTGATTCTCCTATTGGATAATACTTTTAT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTACAAGGATATTAGAAGGCTGATTCTCCTATTGGATAATACTTTTAT  705

seq1  CTTTTAAAGTTGGGTCCTCAGTGGGTCACAATCGTTTGAGGAATTTAGCT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTAAAGTTGGGTCCTCAGTGGGTCACAATCGTTTGAGGAATTTAGCT  755

seq1  GTTGGAACATTACTGAATAAAGTATGACACTGGGGGTTGGCTATGAGAAA  847
      |||||||||||||||||| |||||||||| ||||||||||||||||||| 
seq2  GTTGGAACATTACTGAATTAAGTATGACA-TGGGGGTTGGCTATGAGAAG  804

seq1  AAAGAATAGATAGATCCAAGCCATCTTAATTCTTTCTTCCTCTTTAGTGA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAATAGATAGATCCAAGCCATCTTAATTCTTTCTTCCTCTTTAGTGA  854

seq1  CTGGGGTTGAAGATGTGATCTTTCACCTTTCTACTTCAACAACATGGCAA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGTTGAAGATGTGATCTTTCACCTTTCTACTTCAACAACATGGCAA  904

seq1  TGTTCTATGTGTCCTCCCTGTCATGGTTGATGGCTATCCTCTGGAAGCAT  997
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTATCTGTCCTCCCTGTCATGGTTGATGGCTATCCTCTGGAAGCAT  954

seq1  TACCCAAAGTAGTCTTTTTCTTCTATTAGTTTCCTTGAACATGGTGCTTT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCAAAGTAGTCTTTTTCTTCTATTAGTTTCCTTGAACATGGTGCTTT  1004

seq1  ATGAAAGCAGCAGACAAAAACCAATTACAGTAAAACATATTCTGATTGGA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAGCAGCAGACAAAAACCAATTACAGTAAAACATATTCTGATTGGA  1054

seq1  TTTAAGGTTACCTTTCAGAGAGAGAATTC  1126
      |||||||||||||||||||||||||||||
seq2  TTTAAGGTTACCTTTCAGAGAGAGAATTC  1083