BAC Information

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BAC

Clone NameB6Ng01-136N14
Chromosome4 (Build37)
Map Location 145,731,191 - 145,731,835
singlet/doubletsinglet
Overlap geneLOC433791
Upstream geneVps13d, Tnfrsf1b, Tnfrsf8, LOC666282, 9230115A19Rik, LOC195576, LOC622846, LOC666314, LOC545701, OTTMUSG00000010965, LOC666334, LOC545703, LOC384081, LOC100041379, LOC666349, LOC666351, LOC545704, 1700029I01Rik, LOC236069, LOC384084, LOC666386, LOC666390, LOC100041433, LOC433790
Downstream geneRex2, LOC100043012, LOC100041461, LOC630093, OTTMUSG00000010105, LOC666445, MGC117846, OTTMUSG00000010694, LOC626480, LOC666474, LOC666482, LOC434514, LOC626288, LOC666498, LOC100043034, LOC666514, LOC100041561, LOC100041570, OTTMUSG00000010657, LOC384087, LOC666546, LOC666557, LOC545716, LOC666574, LOC666581
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-136N14.bB6Ng01-136N14.g
ACCDH936515DH936516
length1,0601,239
definitionDH936515|Mus musculus domesticus DNA, BAC clone: B6Ng01-136N14, 5' end.DH936516|Mus musculus domesticus DNA, BAC clone: B6Ng01-136N14, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcaaacagccattttcagtaaaggatttgtcacattcactacat
ttgtagggtttctctcctgtatgaattctctgatgaatcctcagactgcc
tttgaaagtaaagcatttgtcacattcagtgcatttgtaaggtttctctc
ctgtatgaattctctgatgaatcctcaaactgaattttttagtaaagcat
ttgtcacattcactgcatttgtaaggtttctctcctgtatgaattctctg
atgaattctcagatggccattttcagtaaaggatttgtcacattgactac
atttgtaaggtttctcacctgtatgatttctctgatgaattctcagatgg
ccattttcagtaaaggatttgtcacattgactacatttgtaaggtttctc
tcctgtatgaattctctgatgaatattaagatgggatttttgggtaaagc
atttgtcacattcactgcatttgtaaggtttatctcctgtatgaatcctc
tgatgaattctcagattgcctttttcagtaaagcatttctcacatacaat
gcatttgtaaggtttctctcctgtatgaattctctgatgaatattaagat
gagatttttgggtaaagcatttgtcacattcactacatttgtaaggtttc
tctcctgtatgaattctctgatgaatattaagatgaaatttgtgggtaaa
gcatttgtcacattcactgcatttataaattttctcttctgcatgaattc
cctgatggatactaagatggatctgatgggtaaagcatttgtcactttta
ctacttctgtaatgtttcttttcatgataaattctctgctgactttgaag
tttgtctctctgggtaagatatttgtcaaatttactacatttgtaaggtt
cactccagtattatttcgtttcaccatgactttatgtttagaaataaaag
ccttctcagattctgcatttccgttgtgtttttcttctgcatgtggattc
cctgattgagactatgatagaaaacaaagttaactgtttaagagtcattg
atttgcaact
gaattcatacaggagagaaaccttacaaatgcagtgagtgtgacaaatgc
tttacccaaccatcccatcttagtattcatcgtagaattcattcaggaga
gaaaccttgcaaatgtagtgaatgcgacaaatgctttactgacaaattca
ctctgagaaagcatcagagaattcatacaggagagaaaccttacaaatgt
agtgaatgcgacaaatgctttactgacaaattcactatgagaaagcatca
gagaattcatacaggagagaaaccttacaaatgtaatgaatgtgacaaat
gctttactgacaaaggcagtctgagagttcatcagagaattcatacagga
gagaaaccttacaaatgcagtgagtgtgacaaatgttttacccaaccatc
ccatcttagtattcatcgtagaattcattcaggagagaaaccttgcaaat
gtagtgaatgcgacaaatgctttactgacaaattcactctgagaaagcat
cagagaattcatacaggagagaaaccttacaaatgtagtgaatgcgacaa
atgctttactgacaaattcactatgagaaagcatcagagaattcatacag
gagagaaaccttacaaatgtaatgaatgtgacaaatgctttactgacaaa
ggcagtctgagagttcatcagagaattcatacaggagagaaaccttacaa
atgcagtgagtgtgacaaatgttttaccgaaccatcccatcttagtattc
atcgtagaattcattcaggagagaaaccttacaaatgtagtgaatgcgac
aaatgctttactgacaaaggcagtctgagagttcatcagagaattcatac
aggagagaaaccgtaccaatgcagtgagtgtgacaaatgctttactgaca
aaagcagtcttagagttcatcatagaattcatgcaggagagaaccttaca
aatgtagtgaatgcgacaaatgctttactgacaagctatctgagagtcat
catagatcatgcagagaggaatctacaatgtagtgaatggtgacaatgct
ttacctcacaagcctcctttggagagttccatcatagaattcatgcagga
agagaacctttacaatgtagtgaatgtgacaaatgtttactgaaaaacag
gtctgagaaggcctcaagaatcatcgggaagaatacattaatggcagtga
gtgacaagtgccttctccagagatcactcttctgggaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_145731191_145731835
seq2: B6Ng01-136N14.b_467_1105

seq1  TGAATATTAAGATGGGATTTTTGGGTAAAGCATTTGTCACATTCACTGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATATTAAGATGGGATTTTTGGGTAAAGCATTTGTCACATTCACTGCA  50

seq1  TTTGTAAGGTTTATCTCCTGTATGAATCCTCTGATGAATTCTCAGATTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTAAGGTTTATCTCCTGTATGAATCCTCTGATGAATTCTCAGATTGC  100

seq1  CTTTTTCAGTAAAGCATTTCTCACATACAATGCATTTGTAAGGTTTCTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTCAGTAAAGCATTTCTCACATACAATGCATTTGTAAGGTTTCTCT  150

seq1  CCTGTATGAATTCTCTGATGAATATTAAGATGAGATTTTTGGGTAAAGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTATGAATTCTCTGATGAATATTAAGATGAGATTTTTGGGTAAAGCA  200

seq1  TTTGTCACATTCACTACATTTGTAAGGTTTCTCTCCTGTATGAATTCTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCACATTCACTACATTTGTAAGGTTTCTCTCCTGTATGAATTCTCT  250

seq1  GATGAATATTAAGATGAAATTTGTGGGTAAAGCATTTGTCACATTCACTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAATATTAAGATGAAATTTGTGGGTAAAGCATTTGTCACATTCACTG  300

seq1  CATTTATAAATTTTCTCTTCTGCATGAATTCCCTGATGGATACTAAGATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  CATTTATAAATTTTCTCTTCTGCATGAATTCCCTGATGGATACTAAGATG  350

seq1  GATCTGATGGGTAAAGCATTTGTCACTTTTACTACTTCTGAAATGTTTCT  400
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GATCTGATGGGTAAAGCATTTGTCACTTTTACTACTTCTGTAATGTTTCT  400

seq1  TTTCATGATAAATTCTCTGCTGACTTTGAAGTTTGTCTCTCTGGGTAAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATGATAAATTCTCTGCTGACTTTGAAGTTTGTCTCTCTGGGTAAGA  450

seq1  TATTTGTCAAATTTACTACATTTGTAAGGGTTCACTCCAGTATTATTTCG  500
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TATTTGTCAAATTTACTACATTTGTAA-GGTTCACTCCAGTATTATTTCG  499

seq1  TTTCACCATGACTTTATGTTTAGAAATAAAAGCCTTCTCAGATTCTGCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACCATGACTTTATGTTTAGAAATAAAAGCCTTCTCAGATTCTGCAT  549

seq1  TTCCGTTGTGTTTTTTCTTCTGCATGTGGATTCCCTGATTGAGACTAATG  600
      |||||||||| ||||||||||||||||||||||||||||||||||| |||
seq2  TTCCGTTGTG-TTTTTCTTCTGCATGTGGATTCCCTGATTGAGACT-ATG  597

seq1  GTAGAAAACAAAGTTAAACTGTTTACAGAGTCATTGTATTTGCAA  645
       |||||||||||||| ||||||||| |||||||||| ||||||||
seq2  ATAGAAAACAAAGTT-AACTGTTTA-AGAGTCATTG-ATTTGCAA  639