BAC Information

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BAC

Clone NameB6Ng01-136P05
Chromosome4 (Build37)
Map Location 93,505,408 - 93,506,445
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC620269, LOC384125, Tusc1
Downstream gene5830433M19Rik, Plaa, LOC667250, Lrrc19, Ift74, Tek
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-136P05.bB6Ng01-136P05.g
ACCDH936591DH936592
length9301,024
definitionDH936591|Mus musculus domesticus DNA, BAC clone: B6Ng01-136P05, 5' end.DH936592|Mus musculus domesticus DNA, BAC clone: B6Ng01-136P05, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctattgtcagtgatcgtccctagtcatcttttccacctaatccta
atgtccacaacttgactcaaaaattctactctaagggtagtttgcttaat
tggcaaggtaacatgtgtattcttcatatgcaaccctgccagctccgcat
gtcttttaaagtcaacacaaaaggacagtttgttttgttaaggatgaaag
cacccttcagaacccttggtatttcacaggacgtgtagacttcatatcca
atttgtgcagaatctgaagtggcgctacttttcagttgttcctcatgatt
ttgacataaactgtaaagtttcacccccctacacaccccatcacaatctc
tcctccaacactggggtgggaaaacaaataataacaagctcaagcccagc
catagttttagcttttctttcctgtcctgaactaccgaaaggaaattcca
tactttgaaaccggaaaaattttggaaaagggggaggtgggaaaaaaaaa
ggcttggaaaaattcaaaaaccaagccccctttttcaaggggaaaatttt
aaggctaagggtaaagttttcccccccccttttcccatttaaaaaaaaat
ttgcccccccaaaaaaaaaaggtttttgcccccattttccccattttttg
aaaaaaatttttaaaaatttttttttttttttgggggaaaaaaaaaaagg
gacaatatgtttctcccccccccccccgagggtttttgggggaaattaca
ccacattttttttttgcctccccaaaaaaacagggaaaaaaaaatttttt
gtgtggaaaaaaaaattgttggtttctcacacatatatagacgcgcttta
aaagaacacaacagaaaaaaacttctctcgttgtgtgtggtgtgtgtgag
aggaaaaacacaacagtcttctactaaaag
gaattcccttaatgatcataggaagcaagtattactgtctctattttcta
gattagatggcacaaccttgaggaggttggatatttgcctgatgtaatac
agagagaagcagaaatgaaatcagctgcagatctaataatttaatcattc
agttgagtggtacctcactcaaagactcatctgaatgcaacactaagttc
tatgtatccatggaactatcccatgactccaggagactgaagacgttgct
cctttaaaaaaaaaaaaggcacagacattattttcctgaaatcttttgag
ttattctaaaggctcaaaggctatgaaattttcagtagcttaagacactg
acttctgttgtattgtcattgtgaagtggcatggactctgctctattact
ccaggatgcagacaaggaggaggacctgctggggacatgctcatttccct
ggcagagtgataataagatgcttcctgaatatgttttacccagaaaagac
acagagcttttttacttaatttacatcataaaagaaagccaagcaaagta
ggcagtccatggacaagcaagaatataccttgatactctttctcacttaa
tttacatcatcatcatcaaaaaaaaaaaaaaaaaaaaaactcaaggcagt
agacaacaaagattatctacaagagtcctgtagataggaccaagatgggc
attttactcagaaatagaaatgtactaaaaaatcgtataggatgcataca
gttaaactgataaaaggaaacaggtaacatcatacaaaaagacattttat
tcaaaatgttcatgtttgcatgccttcgagtcttctatttaaaatatcat
cctaataagacagccaagtacaaaaattgaatcttagatacagagttcta
ggtattacaaggcatagattcagcattgggttcctccctggtgatctttc
tgtgaagcagacatgttctctgcttggcaaatctgtcccatgtctgtaca
taggtctcaaactatgattctgtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_93505408_93506445
seq2: B6Ng01-136P05.g_67_1090

seq1  GAATTCCCTTAATGATCATAGGAAGCAAGTATTACTGTCTCTATTTTCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTTAATGATCATAGGAAGCAAGTATTACTGTCTCTATTTTCTA  50

seq1  GATTAGATGGCACAACCTTGAGGAGGTTGGATATTTGCCTGATGTAATAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAGATGGCACAACCTTGAGGAGGTTGGATATTTGCCTGATGTAATAC  100

seq1  AGAGAGAAGCAGAAATGAAATCAGCTGCAGATCTAATAATTTAATCATTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAAGCAGAAATGAAATCAGCTGCAGATCTAATAATTTAATCATTC  150

seq1  AGTTGAGTGGTACCTCACTCAAAGACTCATCTGAATGCAACACTAAGTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGAGTGGTACCTCACTCAAAGACTCATCTGAATGCAACACTAAGTTC  200

seq1  TATGTATCCATGGAACTATCCCATGACTCCAGGAGACTGAAGACGTTGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTATCCATGGAACTATCCCATGACTCCAGGAGACTGAAGACGTTGCT  250

seq1  CCTTTAAAAAAAAAAAAGGCACAGACATTATTTTCCTGAAATCTTTTGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTAAAAAAAAAAAAGGCACAGACATTATTTTCCTGAAATCTTTTGAG  300

seq1  TTATTCTAAAGGCTCAAAGGCTATGAAATTTTCAGTAGCTTAAGACACTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCTAAAGGCTCAAAGGCTATGAAATTTTCAGTAGCTTAAGACACTG  350

seq1  ACTTCTGTTGTATTGTCATTGTGAAGTGGCATGGACTCTGCTCTATTACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTGTTGTATTGTCATTGTGAAGTGGCATGGACTCTGCTCTATTACT  400

seq1  CCAGGATGCAGACAAGGAGGAGGACCTGCTGGGGACATGCTCATTTCCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGATGCAGACAAGGAGGAGGACCTGCTGGGGACATGCTCATTTCCCT  450

seq1  GGCAGAGTGATAATAAGATGCTTCCTGAATATGTTTTACCCAGAAAAGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAGTGATAATAAGATGCTTCCTGAATATGTTTTACCCAGAAAAGAC  500

seq1  ACAGAGCTTTTTTACTTAATTTACATCATAAAAGAAAGCCAAGCAAAGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGCTTTTTTACTTAATTTACATCATAAAAGAAAGCCAAGCAAAGTA  550

seq1  GGCAGTCCATGGACAAGCAAGAATATACCTTGATACTCTTTCTCACTTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGTCCATGGACAAGCAAGAATATACCTTGATACTCTTTCTCACTTAA  600

seq1  TTTACATCATCATCATCAAAAAAAAAAAAAAAAAAAAAACTCAAGGCAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACATCATCATCATCAAAAAAAAAAAAAAAAAAAAAACTCAAGGCAGT  650

seq1  AGACAACAAAGATTATCTACAAGAGTCCTGTAGATAGGACCAAGATGGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAACAAAGATTATCTACAAGAGTCCTGTAGATAGGACCAAGATGGGC  700

seq1  ATTTTACTCAGAAATAGAAATGTACTAAAAAATCGTATAGGATGCATACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTACTCAGAAATAGAAATGTACTAAAAAATCGTATAGGATGCATACA  750

seq1  GTTAAACTGATAAAAGGAAACAGGTAACATCATACAAAAAAGACATTTTA  800
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  GTTAAACTGATAAAAGGAAACAGGTAACATCATAC-AAAAAGACATTTTA  799

seq1  TTCAAAATGTTCATGTTTGCATGCCTTCGAGTCTTCTATTTAAAAATATC  850
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TTCAAAATGTTCATGTTTGCATGCCTTCGAGTCTTCTATTT-AAAATATC  848

seq1  ATCCTAATAAGACAGCCAAGTACAAAAATTGAATCTTAGATAACAGAGTT  900
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  ATCCTAATAAGACAGCCAAGTACAAAAATTGAATCTTAGAT-ACAGAGTT  897

seq1  CTAGGTATTACAAGGCATAGATTCAGCATTGTGTTCCTCCCTGGTGATCT  950
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  CTAGGTATTACAAGGCATAGATTCAGCATTGGGTTCCTCCCTGGTGATCT  947

seq1  TTCTGTTGAAGCAGACATGTTCTCCTGCTTTGCAAATCTGTCCCATGTTC  1000
      ||||| ||||||||||||||||| |||||| |||||||||||||||| ||
seq2  TTCTG-TGAAGCAGACATGTTCT-CTGCTTGGCAAATCTGTCCCATG-TC  994

seq1  TTGTTACCAATAGGTCTCAAAACTATTTAATTTCTGTT  1038
      |   |||  ||||||||| |||||||     |||||||
seq2  T--GTAC--ATAGGTCTC-AAACTAT---GATTCTGTT  1024