BAC Information

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BAC

Clone NameB6Ng01-137J10
Chromosome4 (Build37)
Map Location 60,889,424 - 60,890,557
singlet/doubletsinglet
Overlap genenone
Upstream geneSnx30, Slc46a2, LOC100041656, Mup4, LOC620807, LOC100041658, LOC620846, Mup2, LOC620882, LOC100041687, LOC667221, LOC100038948, LOC620997, Mup1, LOC620942, LOC100039008, LOC100039028, LOC620982, LOC100039054, LOC100039063, LOC667234, LOC100039089
Downstream geneLOC667239, LOC100039116, LOC667242, LOC100039150, LOC100039019, LOC100039177, LOC621093, LOC100039206, LOC621127, LOC100039228, LOC384021, LOC100039247, LOC667278, Mup5, LOC435785, LOC667295, LOC100039305, LOC546832, OTTMUSG00000007485, Mup3, LOC100039345, OTTMUSG00000000231, Zfp37
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-137J10.bB6Ng01-137J10.g
ACCDH937071DH937072
length1,2191,133
definitionDH937071|Mus musculus domesticus DNA, BAC clone: B6Ng01-137J10, 5' end.DH937072|Mus musculus domesticus DNA, BAC clone: B6Ng01-137J10, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccttctttatgtcctctaccatcatcatgagatatgcttttaaat
ccaggtctaccttttcaggtgtgttagggtgtcctggattgggcgaagtt
ggcgttctgggttctgatgatggtgagtggtcctggcttctgttagtagg
attcttacgtttacctttcgccatctggcaatctctggagttagttgtta
tcgttgtctttgttaagagattgttcctctgttgattttgttaccctcta
tcagcaggcgtgggagacaagctctcttctctgagtttcagtggtcagag
cagtctctgtaggcaagctctcctctttcagggaaggtgtacagttatct
ggtgtttggacctcctcctggctgaaggtgaaggcccaaaacaggatctt
tcccagaagctgtgttgctttggccaggaaggtggccagttgtctggagt
cgaagatgtcgccgcctgagaagctctgtggctcttgtccggaaggaggc
cggccgtctggagctgaggatggcgctgcctcagaagctctgtggctctt
gccgggaaggtggctggttgtctggagctgaagatggcgccacccagaag
ctctgcgactctcgcccgtcccagaaacggctggcactctgtattccaca
cggtcacccgtgcagcctgccctccgcggagtcccggagccaagaaggct
cccgccggcgcctgtgccacaaacctctcaggcctggcagacccccgtgc
tctcaccaggaaggtggccggctatctggagctgaagatgtcgccgccca
gaagctctgcgactctcgcccgtccagaaatggctggcactctgtattcc
acacaggtcaccccgtgcagcctgcccttccgcggagtcccggagccaag
aaggctcccgccggcgcctgtgccacaaacctctcaggccaggcagaccc
cgtgctcctcaccagaaggggccggctggtctggagctgagatggcgctg
ccagagctctgcactctcgccggtctagaaacgcttgcacttttatattc
acatgtaaccgtgcagctgcctccgcgcatcctgagcagagctcgcggct
gtgcccaaccttcagccggcgaatccggggcctcacagtagtaccgctgt
ctttaactcactcaacttcatcaattgagggctttgtaagtaatgtgcac
tcaggcattcgtatctgac
gaattcttccttgccctttgcaaacttggcaatttcataacctatggatt
gatttagtaatcttatgtttctcaaaacatattcccaataaaacagtggg
tgttcaagagaattgccaactggaatcagatgcaactttggatctggttt
ggaatcagaaagccagttttggagggagtacagactgaactggaaggaca
agtatgcatagaatctttgctttaagatgagtatggaagaacttgagtta
cccaatttttgcaaaagattcatttatatttcatgtgtatgagcactggt
ttttcatgtgtacctgagtaccatgtccagacctggtgcagcagaggtca
gatgaaggagtcagattctttgaaacttgtttttactgagaacccaggtt
caattaccagcactcccatggcatcccaaaacacactctaacttcaggaa
caggaaatcacatactttcaacccttgtgacctcctctacaaatgtggtg
catacaaactcattcagtcacatgcaaataaaatagtaaatcttaattta
aaaaattatcaagaaaagtcttccaaggctaagctgatagctgcctgaaa
ggcttcaacctttgtacagatagcactgacctcagaatccaaagtggtgt
cagtagccaggtttcatcaactgtttacttttgagaacattggactttca
cctgacaagacataataaaataaaaataaaagacttcaagaaggaggcaa
gtacgtgatatgctttgtttcaactttgcttcagctttatatggtatgta
ctattttattcttcctaccatagtattagttaagactcacaaagatgatt
gtaacccgtataatgtcatttagtcatcaacgtgagacctagatttattc
caagactcctctaactcaggagctttttttcttattgattctactaccac
tggtcacaatatttttaccatgaatgggggattgttaaacaagccaaaga
aaaaataaaccagtggttgagaagtttataacagtcagactgcaagtagt
agccagaaagtgcacatgtgtttcttaaatatggaggagttgggtggacc
gagaatgaagcagaatgacaacctgacctctct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_60889424_60890557
seq2: B6Ng01-137J10.g_68_1200

seq1  GAATTCTTCCTTGCCCTTTGCAAACTTGGCAATTTCATAACCTATGGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCCTTGCCCTTTGCAAACTTGGCAATTTCATAACCTATGGATT  50

seq1  GATTTAGTAATCTTATGTTTCTCAAAACATATTCCCAATAAAACAGTGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTAGTAATCTTATGTTTCTCAAAACATATTCCCAATAAAACAGTGGG  100

seq1  TGTTCAAGAGAATTGCCAACTGGAATCAGATGCAACTTTGGATCTGGTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCAAGAGAATTGCCAACTGGAATCAGATGCAACTTTGGATCTGGTTT  150

seq1  GGAATCAGAAAGCCAGTTTTGGAGGGAGTACAGACTGAACTGGAAGGACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATCAGAAAGCCAGTTTTGGAGGGAGTACAGACTGAACTGGAAGGACA  200

seq1  AGTATGCATAGAATCTTTGCTTTAAGATGAGTATGGAAGAACTTGAGTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATGCATAGAATCTTTGCTTTAAGATGAGTATGGAAGAACTTGAGTTA  250

seq1  CCCAATTTTTGCAAAAGATTCATTTATATTTCATGTGTATGAGCACTGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAATTTTTGCAAAAGATTCATTTATATTTCATGTGTATGAGCACTGGT  300

seq1  TTTTCATGTGTACCTGAGTACCATGTCCAGACCTGGTGCAGCAGAGGTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCATGTGTACCTGAGTACCATGTCCAGACCTGGTGCAGCAGAGGTCA  350

seq1  GATGAAGGAGTCAGATTCTTTGAAACTTGTTTTTACTGAGAACCCAGGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAAGGAGTCAGATTCTTTGAAACTTGTTTTTACTGAGAACCCAGGTT  400

seq1  CAATTACCAGCACTCCCATGGCATCCCAAAACACACTCTAACTTCAGGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTACCAGCACTCCCATGGCATCCCAAAACACACTCTAACTTCAGGAA  450

seq1  CAGGAAATCACATACTTTCAACCCTTGTGACCTCCTCTACAAATGTGGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAATCACATACTTTCAACCCTTGTGACCTCCTCTACAAATGTGGTG  500

seq1  CATACAAACTCATTCAGTCACATGCAAATAAAATAGTAAATCTTAATTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACAAACTCATTCAGTCACATGCAAATAAAATAGTAAATCTTAATTTA  550

seq1  AAAAATTATCAAGAAAAGTCTTCCAAGGCTAAGCTGATAGCTGCCTGAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTATCAAGAAAAGTCTTCCAAGGCTAAGCTGATAGCTGCCTGAAA  600

seq1  GGCTTCAACCTTTGTACAGATAGCACTGACCTCAGAATCCAAAGTGGTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTCAACCTTTGTACAGATAGCACTGACCTCAGAATCCAAAGTGGTGT  650

seq1  CAGTAGCCAGGTTTCATCAACTGTTTACTTTTGAGAACATTGGAC-TTCA  699
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CAGTAGCCAGGTTTCATCAACTGTTTACTTTTGAGAACATTGGACTTTCA  700

seq1  CCTGACAAGACATAATAAAATAAAAATAAAAGACTTCAAGAAGGAGGCAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGACAAGACATAATAAAATAAAAATAAAAGACTTCAAGAAGGAGGCAA  750

seq1  GTACGTGATATGCTTTGTTTCAACTTTGCTTCAGCTTTATATGGTATGTA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACGTGATATGCTTTGTTTCAACTTTGCTTCAGCTTTATATGGTATGTA  800

seq1  CTATTTTATTCTTCGTACCATAGTATTAGTTAAGACTCACAAAGATGA-T  848
      |||||||||||||| ||||||||||||||||||||||||||||||||| |
seq2  CTATTTTATTCTTCCTACCATAGTATTAGTTAAGACTCACAAAGATGATT  850

seq1  GTAA-CCGTATAATGTCATTTAGTCAATCAACGTGAGAACTTAGATTTAT  897
      |||| |||||||||||||||||||| ||||||||||| || |||||||||
seq2  GTAACCCGTATAATGTCATTTAGTC-ATCAACGTGAG-ACCTAGATTTAT  898

seq1  TCCAAGACT-CTCTAACTCAGGAGCCTTTTTTCTTATTGACTCTACTA-C  945
      ||||||||| ||||||||||||||| |||||||||||||| ||||||| |
seq2  TCCAAGACTCCTCTAACTCAGGAGCTTTTTTTCTTATTGATTCTACTACC  948

seq1  ACAGGTCACAATATTTTTACCATGAATGGGGAATGGTTAAAC-AGTCAAA  994
      || |||||||||||||||||||||||||||| || ||||||| || ||||
seq2  ACTGGTCACAATATTTTTACCATGAATGGGGGATTGTTAAACAAGCCAAA  998

seq1  GGAGAAATAAA-CAGTGTTGGAGAGTTATAAACAAGTCAGACTGGCAGGT  1043
      | | ||||||| ||||| | ||||  | || |  ||||||||| ||| ||
seq2  GAAAAAATAAACCAGTGGTTGAGAAGTTTATAACAGTCAGACT-GCAAGT  1047

seq1  AGTAGCAAAGAAAGTGCACATGTGTTTCTTTAAAATATGGAGGAGTTGGT  1093
      ||||||  ||||||||||||||||||||||  ||||||||||||||||| 
seq2  AGTAGC-CAGAAAGTGCACATGTGTTTCTT--AAATATGGAGGAGTTGG-  1093

seq1  GTGGACCGAGAATGAATGAGGTATGACAA-CTGACTCTCTCT  1134
      |||||||||||||||| |  | ||||||| ||||| ||||||
seq2  GTGGACCGAGAATGAA-GCAGAATGACAACCTGAC-CTCTCT  1133