BAC Information

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BAC

Clone NameB6Ng01-137L13
Chromosome4 (Build37)
Map Location 28,835,347 - 28,937,324
singlet/doubletdoublet
Overlap geneEpha7
Upstream geneTpm3-rs2, LOC100040842, LOC100040735, LOC230044, LOC665141, LOC100040773
Downstream geneLOC100040907, LOC100040811
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-137L13.bB6Ng01-137L13.g
ACCDH937161DH937162
length390736
definitionDH937161|Mus musculus domesticus DNA, BAC clone: B6Ng01-137L13, 5' end.DH937162|Mus musculus domesticus DNA, BAC clone: B6Ng01-137L13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(28,936,929 - 28,937,324)(28,835,347 - 28,836,082)
sequence
tacattggtttccattgtagatttctttatgtctcctcagagaaaggaga
ctgcccacataaattctactgaatcttactgttcatataaattctattag
gtattagagacaaaggggagggggaagagggcagaggtaggatgggaagt
ttatggaggggtaaccaggcagttggatatcatttgagatgtaaatgaat
cgaatgattaataaaaaaaattaaaaaattcttagtcatagctgtgccca
tgtttcattcttaattattttttattattacatatttttttattctccag
attttaaatcatccatagtttgcttagtgttttttttttttttacttttt
gagattataatataattacactatctctatcttcccttca
gaattcaactcaacttttatcctaatgaaaaggcactgctggtatatggg
ctaatgagtgtcactatgttcttaaaggacatgcatttgcatatttttta
ataaattgttttgaactgctcatgaagtttagctaagaatatttttaatg
ggagaaaacccacaccagtgttacaactctcttaatgaattaaataagaa
aaggacttttcaatagaatctctggcacataaacaaaaggaaacctttaa
attcaattcttgtggacctggactggttacttccatgatgctcatgccac
tattgtgccagtggacatatcttgcccgagtcatatattgtgtatattgc
atggttcacagtgggatgactgataaatgcatttcttcttgggcagcttg
catagcatcttccaagtttccaagtagaaatggagattcagggtcagtgc
caactttatttcatcatgtacaataactcggtatttggtgtcttcagcaa
ttggagctaccatcaagttctagagagtgaaaaaaaaatgcactcacagt
agcctgtctttgggcatcagtggggcttcattatctagtaactccaaaag
acttaacacaatcctggcactggtcttctttgtaagcctctggtggttac
tgagagcattgatgttccattatagggtaactgttttatatatatatata
tatgtatatatgtatatgtatatgtatatgtatatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_28936929_28937324
seq2: B6Ng01-137L13.b_48_443 (reverse)

seq1  TGAAGGGAAGATAGAGATGGTGTAATTATATTATAATCTCAAAAAGTAAA  50
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TGAAGGGAAGATAGAGATAGTGTAATTATATTATAATCTCAAAAAGTAAA  50

seq1  AAAAAAAAAAACACTAAGCAAACTATGGATGATTTAAAATCTGGAGAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAACACTAAGCAAACTATGGATGATTTAAAATCTGGAGAATA  100

seq1  AAAAAATATGTAATAATAAAAAATAATTAAGAATGAAACATGGGCACAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATATGTAATAATAAAAAATAATTAAGAATGAAACATGGGCACAGC  150

seq1  TATGACTAAGAATTTTTTAATTTTTTTTATTAATCATTCGATTCATTTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGACTAAGAATTTTTTAATTTTTTTTATTAATCATTCGATTCATTTAC  200

seq1  ATCTCAAATGATATCCAACTGCCTGGTTACCCCTCCATAAACTTCCCATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCAAATGATATCCAACTGCCTGGTTACCCCTCCATAAACTTCCCATC  250

seq1  CTACCTCTGCCCTCTTCCCCCTCCCCTTTGTCTCTAATACCTAATAGAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCTCTGCCCTCTTCCCCCTCCCCTTTGTCTCTAATACCTAATAGAAT  300

seq1  TTATATGAACAGTAAGATTCAGTAGAATTTATGTGGGCAGTCTCCTTTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATGAACAGTAAGATTCAGTAGAATTTATGTGGGCAGTCTCCTTTCT  350

seq1  CTGAGGAGACATAAAGAAATCTACAATGGAAACCAATGTAGAATTC  396
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGAGACATAAAGAAATCTACAATGGAAACCAATGTAGAATTC  396

seq1: chr4_28835347_28836082
seq2: B6Ng01-137L13.g_69_804

seq1  GAATTCAACTCAACTTTTATCCTAATGAAAAGGCACTGCTGGTATATGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACTCAACTTTTATCCTAATGAAAAGGCACTGCTGGTATATGGG  50

seq1  CTAATGAGTGTCACTATGTTCTTAAAGGACATGCATTTGCATATTTTTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATGAGTGTCACTATGTTCTTAAAGGACATGCATTTGCATATTTTTTA  100

seq1  ATAAATTGTTTTGAACTGCTCATGAAGTTTAGCTAAGAATATTTTTAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATTGTTTTGAACTGCTCATGAAGTTTAGCTAAGAATATTTTTAATG  150

seq1  GGAGAAAACCCACACCAGTGTTACAACTCTCTTAATGAATTAAATAAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAAAACCCACACCAGTGTTACAACTCTCTTAATGAATTAAATAAGAA  200

seq1  AAGGACTTTTCAATAGAATCTCTGGCACATAAACAAAAGGAAACCTTTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGACTTTTCAATAGAATCTCTGGCACATAAACAAAAGGAAACCTTTAA  250

seq1  ATTCAATTCTTGTGGACCTGGACTGGTTACTTCCATGATGCTCATGCCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAATTCTTGTGGACCTGGACTGGTTACTTCCATGATGCTCATGCCAC  300

seq1  TATTGTGCCAGTGGACATATCTTGCCCGAGTCATATATTGTGTATATTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTGCCAGTGGACATATCTTGCCCGAGTCATATATTGTGTATATTGC  350

seq1  ATGGTTCACAGTGGGATGACTGATAAATGCATTTCTTCTTGGGCAGCTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTCACAGTGGGATGACTGATAAATGCATTTCTTCTTGGGCAGCTTG  400

seq1  CATAGCATCTTCCAAGTTTCCAAGTAGAAATGGAGATTCAGGGTCAGTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGCATCTTCCAAGTTTCCAAGTAGAAATGGAGATTCAGGGTCAGTGC  450

seq1  CAACTTTATTTCATCATGTACAATAACTCGGTATTTGGTGTCTTCAGCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTTTATTTCATCATGTACAATAACTCGGTATTTGGTGTCTTCAGCAA  500

seq1  TTGGAGCTACCATCAAGTTCTAGAGAGTGAAAAAAAAATGCACTCACAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGCTACCATCAAGTTCTAGAGAGTGAAAAAAAAATGCACTCACAGT  550

seq1  AGCCTGTCTTTGGGCATCAGTGGGGCTTCATTATCTAGTAACTCCAAAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGTCTTTGGGCATCAGTGGGGCTTCATTATCTAGTAACTCCAAAAG  600

seq1  ACTTAACACAATCCTGGCACTGGTCTTCTTTGTAAGCCTCTGGTGGTTAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAACACAATCCTGGCACTGGTCTTCTTTGTAAGCCTCTGGTGGTTAC  650

seq1  TGAGAGCATTGATGTTCCATTATAGGGTAACTGTTTTATATATATATATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGCATTGATGTTCCATTATAGGGTAACTGTTTTATATATATATATA  700

seq1  TATGTATATATGTATATGTATATGTATATGTATATG  736
      ||||||||||||||||||||||||||||||||||||
seq2  TATGTATATATGTATATGTATATGTATATGTATATG  736