BAC Information

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BAC

Clone NameB6Ng01-137M16
Chromosome4 (Build37)
Map Location 139,543,840 - 139,693,420
singlet/doubletdoublet
Overlap geneIgsf21
Upstream geneTmco4, Htr6, LOC665683, Nbl1, 2310028O11Rik, Hspe1-ps4, 9530077C14Rik, Capzb, Pqlc2, LOC100042808, Akr7a5, LOC625977, LOC626000, Mrto4, C230096C10Rik, Zubr1, C79267, Aldh4a1, Tas1r2, Pax7, Gm1667, Klhdc7a
Downstream geneLOC100040728, Arhgef10l, Rcc2, Padi6, Padi4, Padi3, Padi1, Padi2, Sdhb, Atp13a2, Mfap2, Crocc, Necap2, LOC638991, Spata21, D4Ertd22e
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-137M16.bB6Ng01-137M16.g
ACCDH937215DH937216
length753375
definitionDH937215|Mus musculus domesticus DNA, BAC clone: B6Ng01-137M16, 5' end.DH937216|Mus musculus domesticus DNA, BAC clone: B6Ng01-137M16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(139,692,666 - 139,693,420)(139,543,840 - 139,544,220)
sequence
gaattctctggggctccgcgtcctcaggttctggtccgggatggagaagg
ctcccagcctccccgacggagagaagttaatgtccctcgtccatagcatg
cctaatgtgtccacacgccgggaactattctaggaccagaatataattgt
gaggagacaaacagaactccttccccggcagggtaaggagacagaccatt
aattaagtaattagcaagaaaatagcaggcggtgataagtgcggtgcaga
taattgtgggtggtatggtggggaatagctagagttcttgatgtgctgct
ggccagaaagtgacattcacactggactgtatgacgaggagggagctgtg
tatagacctaggaggagagtgtcctgtcactgttctgttgctgagaaaac
acctgataatggcaacttcagggagaaagggcttgctccctcccacagtt
caatggcacagactatcatgatggggatggcaaaacagcaggagtgggag
gcaggcggtcatatcacatccacagtcaggaacagagagcgatgaatgca
tgttgctgatcagcttcctctctccattatacagtccagaatctattacc
tagggaatgacgccacccacagtggcaaggtcttcccacctcagcctaat
gaagagaatccacacaggtctcctcagaggtccatctcccaagtcattcc
agaggtcctcaactgacaactgagattaacaatggcagagatcaggccaa
gca
cctccccaaaacgaagcctcttcccttagcctgggcccctgagtaaatgg
gacagagatgcctgccagcctgcaccctaagggtgtcgccgggagaggat
tctttgccatactgagccccaagaccgcaggtgacctatcagtgcaggcg
aatccgggctgttggtgactagtccgtgtagctgctcacacaccttctgc
ctcagtggctgacgtgggtgtcagtctcacaccaacatagccccagttct
caggactcgtgggagcttagcagggcccagtgatgggctcccagtgagca
gcatggagagaggaggctggctgcagagtggcttctcccagaggtgggga
gaaaggtggaagttggggtgggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_139692666_139693420
seq2: B6Ng01-137M16.b_49_801 (reverse)

seq1  TGCTTGGCCTGTTCTCTGCCATTGTTAATCTCAGTTGTCAGTTTGAGGAC  50
      ||||||||||| ||||||||||||||||||||||||||||| ||||||||
seq2  TGCTTGGCCTGATCTCTGCCATTGTTAATCTCAGTTGTCAG-TTGAGGAC  49

seq1  CTCTGGAATGACTTGGGAGATGGACCTCTGAGGAGACCTGTGTGGATTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGAATGACTTGGGAGATGGACCTCTGAGGAGACCTGTGTGGATTCT  99

seq1  CTTCATTAGGCTGAGGTGGGAAGACCTTGCCACTGTGGGTGGCGTCATTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATTAGGCTGAGGTGGGAAGACCTTGCCACTGTGGGTGGCGTCATTC  149

seq1  CCTAGGTAATAGATTCTGGACTGTATAAATGGAGAGAGGAAGCTGATCAG  200
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CCTAGGTAATAGATTCTGGACTGTAT-AATGGAGAGAGGAAGCTGATCAG  198

seq1  CAACATGCATTCATCGCTCTCTGTTCCTGACTGTGGATGTGATATGACCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACATGCATTCATCGCTCTCTGTTCCTGACTGTGGATGTGATATGACCG  248

seq1  CCTGCCTCCCACTCCTGCTGTTTTGCCATCCCCATCATGATAGTCTGTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCCTCCCACTCCTGCTGTTTTGCCATCCCCATCATGATAGTCTGTGC  298

seq1  CATTGAACTGTGGGAGGGAGCAAGCCCTTTCTCCCTGAAGTTGCCATTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGAACTGTGGGAGGGAGCAAGCCCTTTCTCCCTGAAGTTGCCATTAT  348

seq1  CAGGTGTTTTCTCAGCAACAGAACAGTGACAGGACACTCTCCTCCTAGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGTTTTCTCAGCAACAGAACAGTGACAGGACACTCTCCTCCTAGGT  398

seq1  CTATACACAGCTCCCTCCTCGTCATACAGTCCAGTGTGAATGTCACTTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATACACAGCTCCCTCCTCGTCATACAGTCCAGTGTGAATGTCACTTTC  448

seq1  TGGCCAGCAGCACATCAAGAACTCTAGCTATTCCCCACCATACCACCCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCAGCAGCACATCAAGAACTCTAGCTATTCCCCACCATACCACCCAC  498

seq1  AATTATCTGCACCGCACTTATCACCGCCTGCTATTTTCTTGCTAATTACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATCTGCACCGCACTTATCACCGCCTGCTATTTTCTTGCTAATTACT  548

seq1  TAATTAATGGTCTGTCTCCTTACCCTGCCGGGGAAGGAGTTCTGTTTGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTAATGGTCTGTCTCCTTACCCTGCCGGGGAAGGAGTTCTGTTTGTC  598

seq1  TCCTCACAATTATATTCTGGTCCTAGAATAGTTCCCGGCGTGTGGACACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCACAATTATATTCTGGTCCTAGAATAGTTCCCGGCGTGTGGACACA  648

seq1  TTAGGCATGCTATGGACGAGGGACATTAACTTCTCTCCGTCGGGGAGGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGCATGCTATGGACGAGGGACATTAACTTCTCTCCGTCGGGGAGGCT  698

seq1  GGGAGCCTTCTCCATCCCGGACCAGAACCTGAGGACGCGGAGCCCCAGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGCCTTCTCCATCCCGGACCAGAACCTGAGGACGCGGAGCCCCAGAG  748

seq1  AATTC  755
      |||||
seq2  AATTC  753

seq1: chr4_139543840_139544220
seq2: B6Ng01-137M16.g_68_448

seq1  GAATTCCCTCCCCAAAACGAAGCCTCTTCCCTTAGCCTGGGCCCCTGAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTCCCCAAAACGAAGCCTCTTCCCTTAGCCTGGGCCCCTGAGT  50

seq1  AAATGGGACAGAGATGCCTGCCAGCCTGCACCCTAAGGGTGTCGCCGGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGGACAGAGATGCCTGCCAGCCTGCACCCTAAGGGTGTCGCCGGGA  100

seq1  GAGGATTCTTTGCCATACTGAGCCCCAAGACCGCAGGTGACCTATCAGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGATTCTTTGCCATACTGAGCCCCAAGACCGCAGGTGACCTATCAGTG  150

seq1  CAGGCGAATCCGGGCTGTTGGTGACTAGTCCGTGTAGCTGCTCACACACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCGAATCCGGGCTGTTGGTGACTAGTCCGTGTAGCTGCTCACACACC  200

seq1  TTCTGCCTCAGTGGCTGACGTGGGTGTCAGTCTCACACCAACATAGCCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCCTCAGTGGCTGACGTGGGTGTCAGTCTCACACCAACATAGCCCC  250

seq1  AGTTCTCAGGACTCGTGGGAGCTTAGCAGGGCCCAGTGATGGGCTCCCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTCAGGACTCGTGGGAGCTTAGCAGGGCCCAGTGATGGGCTCCCAG  300

seq1  TGAGCAGCATGGAGAGAGGAGGCTGGCTGCAGAGTGGCTTCTCCCAGAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCAGCATGGAGAGAGGAGGCTGGCTGCAGAGTGGCTTCTCCCAGAGG  350

seq1  TGGGGAGAAAGGTGGAAGTTGGGGTGGGGGG  381
      |||||||||||||||||||||||||||||||
seq2  TGGGGAGAAAGGTGGAAGTTGGGGTGGGGGG  381