BAC Information

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BAC

Clone NameB6Ng01-138P22
Chromosome4 (Build37)
Map Location 112,249,750 - 112,250,601
singlet/doubletsinglet
Overlap geneLOC630887
Upstream geneSpata6, LOC621612, Slc5a9, LOC639774, C130057D23Rik, LOC639781, 9530098N22Rik, A430090E18Rik, A030013N09Rik, LOC665949
Downstream geneOTTMUSG00000008540, LOC100040581, A030001H23Rik, LOC433745, LOC545668, LOC230622, LOC100040607, LOC242627
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-138P22.bB6Ng01-138P22.g
ACCDH938093DH938094
length1,227992
definitionDH938093|Mus musculus domesticus DNA, BAC clone: B6Ng01-138P22, 5' end.DH938094|Mus musculus domesticus DNA, BAC clone: B6Ng01-138P22, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctttttagctctgcaccccattttaaaatagggctattttgtt
ttgtgagggttaactttttgagtttgttgcaactttggaaaattgccctc
tgtaagatgtaggattagtgaaaaaatttcccccatctataggttgctga
tttgtcctattgacagtatattttgccttacataagcttttcagtttcaa
gaaatcctacttatcaattggtaaatttaaagcctgagccattggtattc
tgttcaggaaacttttccctgtgccaatgcgtccgagattctttcccact
ttctcttctattagattcaatattgctctggtgagaattctttgtttagc
tctgtaccccattttcaatggagttatttgattttctggagcccagcttc
ttgggttctttgtatgttttagataatagttcccaatttgaattaggatt
ggtaaagatcctttctcaatatgtaggtggcctttttgtcttattgacag
tgtctttgccttacagaacctttgcaattttatgagatcccatttgtcaa
ttctccatcttacagaacaagccattgctattttgttcaggaatttctcc
cctgttcccatatctttgaggcctttctccactttctcctctataaattt
tagtgtctctggttttatgtggagttccttgatccacttagacttgagct
tggtaaaaggatataagaatggataaattcacattcttcttcatgataac
tgccagttgagccagcaccatttgttgaaaatgctgtctttttccctctg
gatggttttatcccccatgtcaaagatcaagtgaccataggtgtgtgggt
tcatttctcggtcggtctccagttctattctattgatttacctatctgtt
gctgtaccagtaccgtgcagttttatcacaattgttctgtagtacacttg
aagtcaggcatgatgattccaccagaggttctttgctattaagaatagtt
tgctatcctagtttttctttttttcagatgaattggcaattaccttttct
actccatgagaatggagttgggattttgaaggaatttaattgttactttg
taaattgcttaggcagatagccatttataatataaatatgccaactcatt
ggaggacatgggaaactttccacttcggatcttgattcttctcgaactct
gagagcctatttatgcagtaccttcat
gaattcagagggagtttcttgaagcaaagcaattcagtgagaaactgaga
gaagctattttcaatcaataagtaaggagaggagtgttcttaagttaaaa
cagctgaattaaaccagaaaaccagaatttaaaaacaaacaaacaaaaac
tagaaagagtgagcttattcaacagtaagccaccaagatgacagttatat
caggtaaatgaaagacatatccccaaagaaaattaggtgtaaatcctgat
tataaaactagaaataaaactttaacttcactttggttattctgatagaa
caagtcataagatattctccaagtgaaaatatagtccttaatattatata
cacactccttgagttcttcatatattttggatattagcactgtatatgaa
gtagggttagtaaagatcttttcccatgtgggttgccattttgtcctatt
gacagtgcccttgtcttacagaagcttttcaattttatgaggaaacattt
gtcaattgttcatcttagagcatgagacatttgtattctgttcagtaatt
tttcccctgtgtcaatgtattggaggaggttctttcccacgttcttttat
aataaattcggtatatctagtttttgagctttgttcaaggaaataacaat
ggattaatttgcatttttctacatgctgaccaccagttgatccaatacca
tttgttgaaaaagctgccccccacgcccactgtatggttttggcttcttt
ggcaaagatcaagtgaccatagttgtgtggcttcatttctgggtctttga
ttcaatttcattgatctacctgccaataccttgaaggttttgtcactcat
gctttgtagtataggttgaggtgggaccattgatttccctcagaagttat
tttatgttgagataggattttgctatcctgcattttttggtactctctgt
gaagattgagttggaattttgatggggatgcatgaatcatag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_112249750_112250601
seq2: B6Ng01-138P22.g_66_917

seq1  GAATTCAGAGGGAGTTTCTTGAAGCAAAGCAATTCAGTGAGAAACTGAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAGGGAGTTTCTTGAAGCAAAGCAATTCAGTGAGAAACTGAGA  50

seq1  GAAGCTATTTTCAATCAATAAGTAAGGAGAGGAGTGTTCTTAAGTTAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCTATTTTCAATCAATAAGTAAGGAGAGGAGTGTTCTTAAGTTAAAA  100

seq1  CAGCTGAATTAAACCAGAAAACCAGAATTTAAAAACAAACAAACAAAAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGAATTAAACCAGAAAACCAGAATTTAAAAACAAACAAACAAAAAC  150

seq1  TAGAAAGAGTGAGCTTATTCAACAGTAAGCCACCAAGATGACAGTTATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAGAGTGAGCTTATTCAACAGTAAGCCACCAAGATGACAGTTATAT  200

seq1  CAGGTAAATGAAAGACATATCCCCAAAGAAAATTAGGTGTAAATCCTGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTAAATGAAAGACATATCCCCAAAGAAAATTAGGTGTAAATCCTGAT  250

seq1  TATAAAACTAGAAATAAAACTTTAACTTCACTTTGGTTATTCTGATAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAACTAGAAATAAAACTTTAACTTCACTTTGGTTATTCTGATAGAA  300

seq1  CAAGTCATAAGATATTCTCCAAGTGAAAATATAGTCCTTAATATTATATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTCATAAGATATTCTCCAAGTGAAAATATAGTCCTTAATATTATATA  350

seq1  CACACTCCTTGAGTTCTTCATATATTTTGGATATTAGCACTGTATATGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTCCTTGAGTTCTTCATATATTTTGGATATTAGCACTGTATATGAA  400

seq1  GTAGGGTTAGTAAAGATCTTTTCCCATGTGGGTTGCCATTTTGTCCTATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGGTTAGTAAAGATCTTTTCCCATGTGGGTTGCCATTTTGTCCTATT  450

seq1  GACAGTGCCCTTGTCTTACAGAAGCTTTTCAATTTTATGAGGAAACATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGTGCCCTTGTCTTACAGAAGCTTTTCAATTTTATGAGGAAACATTT  500

seq1  GTCAATTGTTCATCTTAGAGCATGAGACATTTGTATTCTGTTCAGTAATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAATTGTTCATCTTAGAGCATGAGACATTTGTATTCTGTTCAGTAATT  550

seq1  TTTCCCCTGTGTCAATGTATTGGAGGAGGTTCTTTCCCACGTTCTTTTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCCTGTGTCAATGTATTGGAGGAGGTTCTTTCCCACGTTCTTTTAT  600

seq1  AATAAATTCGGTATATCTAGTTTTTGAGCTTTGTTCAAGGAAATAACAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATTCGGTATATCTAGTTTTTGAGCTTTGTTCAAGGAAATAACAAT  650

seq1  GGATTAATTTGCATTTTTCTACATGCTGACCACCAGTTGATCCAATACCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTAATTTGCATTTTTCTACATGCTGACCACCAGTTGATCCAATACCA  700

seq1  TTTGTTGAAAAAGCTGCCCCCCACGCCCACTGTATGGTTTTGGCTTCTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTGAAAAAGCTGCCCCCCACGCCCACTGTATGGTTTTGGCTTCTTT  750

seq1  GGCAAAGATCAAGTGACCATAGTTGTGTGGCTTCATTTCTGGGTCTTTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAAGATCAAGTGACCATAGTTGTGTGGCTTCATTTCTGGGTCTTTGA  800

seq1  TTCAATTTCATTGATCTACCTGCCAATACCTTGAAGGTTTTGTCACTCAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATTTCATTGATCTACCTGCCAATACCTTGAAGGTTTTGTCACTCAT  850

seq1  GC  852
      ||
seq2  GC  852