BAC Information

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BAC

Clone NameB6Ng01-140G03
Chromosome4 (Build37)
Map Location 16,780,561 - 16,781,759
singlet/doubletsinglet
Overlap genenone
Upstream geneCalb1, Decr1, Nbn, Osgin2, Ripk2, LOC667150, LOC383994
Downstream geneLOC100040154, LOC667212, LOC100040173, Mmp16
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-140G03.bB6Ng01-140G03.g
ACCDH939129DH939130
length1,1741,154
definitionDH939129|Mus musculus domesticus DNA, BAC clone: B6Ng01-140G03, 5' end.DH939130|Mus musculus domesticus DNA, BAC clone: B6Ng01-140G03, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgcaatgttggtaaaatattgataagtttatcaataaacata
gaaaagtaaacttaatagtatatggaatgctgagagattatttttaacaa
ttcagccagagccaagataaattgtttgcaatgattttaagcaatcttcc
tagagtcctcagccatatcttatctacaagtatgaagaaaaaaaaaagag
agaaaaactcaaaaatgtcaactcaatacgattccatagaacttttctaa
tgttaaaataaaatttccactttccaggggaatgatagaatgggcagtcc
tacagctaacccatagctctggaggcaaattgcttgcatttgaactgtga
gatatctccagtcattagttggatgatcttcactaactcataatcatttc
tctcttctcatctataggatagtacaaattatcagaaccatcttccatgt
gatacatagctttctcttattagttcttcagtctcaaaaaatagtacaaa
ttaaccaactataggctcatttgtacagcaaaaagaccaagctgggcatg
gtggcacacgcctttaatcccagcatgggaggcagaggcaaacagatttc
tgagttcgagaccagcctggtctacaaagtgggttccaggacagccaggg
atacacagagaaaaaaaaaaaacaaaaaacaaacaaacaaaacaacaaaa
aaaacatcaatctctttcctaaataaattttacaaaatgtgccacaatgg
aagtgactcatgacactttaaagaagtattatctaagaaaaagaacaata
ccatgaccaatgtgttccctactttcatttctctggaatgaatacttcat
ggatttgactgacaaatacatcttgttccatgaagtatgcttggaaataa
aggtcacacccactaaagtaaagaagcatataggacttgagtccccaaca
ctgtgattgtaattctacacaacaaggacaccccacagcataaaacagaa
aggttcattttgttgagatgttacctcccattatggcatacaagtagttt
gctctccattgacccgaatcaaaaacaatgggctaaaggccttatcagga
caggctattcatcttactatatccgaacattgattagaagagaaggaaca
cgttatcagccccatagctctttc
gaattctcacctgagaaataccgaatggctgagaagcacctgaaaaactg
ttcagtaatctcaatcatcagggaaatgtaaatcaaaacaaccctgagat
tccatctcacaccagtcagaatgtctaagatcaaaaattcaggtgacagc
agatgctggagaggatggggagaaagaggaaaacccttccattgttggtg
tgattgcaagcttgtacaaccactctggaagtcagtctggtggttcctca
gaaaattggacatggtactactagcggatcctgcaatacctctcctggac
atatatccagaagttgttctaactaggaaggtaagaaacttgctccacta
tgttcatagcagccttctttataatagccagtacctggaaagaacctaga
tgcccctcaacagaggaatggatacaaaaaaaatgtggtacatttacaca
atggagtaccactctgctattaaaaagaatgaattaatgaaattcctagg
caaatgtttggacctggagggccttatcctgagtgtggtaacccaatcac
aaaaaacctcaaatgatatggactcactgataagtggatattagcccaga
aacttagaatacccatgatataagttacaattttcaaaacacatgaaact
caagaagaacgaagaccaaagtgtggacactttgacccttcctagaattg
ggaacaaaacacccatggaaggagttaaagagacaaagtttggagctgag
acaaaaggatggaccatctggagactgtcatatccagggatccatctcat
aatcagcctccaaacacttataccatttcatatactagcaagattttgct
gaaaggactctgatatagctgtcttttgtgaaactatgctggggtcttgc
aacacataaatggatgctcacagtcagctattgatggatcacaggcccca
atgagatctagagaagtacccaggagctaaagggatctgcaacctatagt
ggatcacatatgactagcagaaccccgatctcttgactctagctgcaatg
tagcaaatgttctagttgtcatactggaaggagtcccatggcttgcaact
ttatttcccagtacaggaacgctaggtccaaatcgggatgggtgagattg
gcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_16780561_16781759
seq2: B6Ng01-140G03.b_48_1221 (reverse)

seq1  GAAAGAAGCCTATGTGGGCTGATATACGTTGTTTCTTCTCTTTCTAATCA  50
      ||||||   ||||| ||||||||| ||| |||| |||||| |||||||| 
seq2  GAAAGA--GCTATG-GGGCTGATA-ACG-TGTTCCTTCTC-TTCTAATC-  43

seq1  TATTGTTCGGGTATAGTAAGAATTGATTTAGCTTTGTCCTTTGATAAGGC  100
       | ||||||| ||||||||||  |||  ||||  |||||  |||||||| 
seq2  -AATGTTCGGATATAGTAAGA--TGA-ATAGC-CTGTCC--TGATAAGG-  85

seq1  CCCTTTAGGCCATATGGTTTATGATTCGTGTCAATGTGGAGCAAAACTAC  150
       ||||||| ||  || |||| ||||||| |||||||  |||| |||||||
seq2  -CCTTTAGCCC--ATTGTTTTTGATTCGGGTCAATGGAGAGC-AAACTAC  131

seq1  CTGTATTGCCATAATGGGAGGTAACATCTACAACAAAATGAACCTTTCTT  200
       |||| ||||||||||||||||||||||| |||||||||||||||||| |
seq2  TTGTA-TGCCATAATGGGAGGTAACATCT-CAACAAAATGAACCTTTC-T  178

seq1  GTTTTATGCTTGTGTGTGTGTCCTTGTTGTGTTGGAATTACAATCACAGT  250
      ||||||||| |||| | |||||||||||||| | ||||||||||||||||
seq2  GTTTTATGC-TGTG-GGGTGTCCTTGTTGTG-TAGAATTACAATCACAGT  225

seq1  GTTGGGGACTCAAGTCCTATATGCTTCTTTACTTTAGTGGGTGTGACCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGGGACTCAAGTCCTATATGCTTCTTTACTTTAGTGGGTGTGACCTT  275

seq1  TATTTCCAAGCATACTTCATGGAACAAGATGTATTTGTCAGTCAAATCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCCAAGCATACTTCATGGAACAAGATGTATTTGTCAGTCAAATCCA  325

seq1  TGAAGTATTCATTCCAGAGAAATGAAAGTAGGGAACACATTGGTCATGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTATTCATTCCAGAGAAATGAAAGTAGGGAACACATTGGTCATGGT  375

seq1  ATTGTTCTTTTTCTTAGATAATACTTCTTTAAAGTGTCATGAGTCACTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTCTTTTTCTTAGATAATACTTCTTTAAAGTGTCATGAGTCACTTC  425

seq1  CATTGTGGCACATTTTGTAAAATTTATTTAGGAAAGAGATTGATGTTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGTGGCACATTTTGTAAAATTTATTTAGGAAAGAGATTGATGTTTTT  475

seq1  TTTGTTGTTTTGTTTGTTTGTTTTTTGTTTTTTTTTTTTCTCTGTGTATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTGTTTTGTTTGTTTGTTTTTTGTTTTTTTTTTTTCTCTGTGTATC  525

seq1  CCTGGCTGTCCTGGAACCCACTTTGTAGACCAGGCTGGTCTCGAACTCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCTGTCCTGGAACCCACTTTGTAGACCAGGCTGGTCTCGAACTCAG  575

seq1  AAATCTGTTTGCCTCTGCCTCCCATGCTGGGATTAAAGGCGTGTGCCACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTGTTTGCCTCTGCCTCCCATGCTGGGATTAAAGGCGTGTGCCACC  625

seq1  ATGCCCAGCTTGGTCTTTTTGCTGTACAAATGAGCCTATAGTTGGTTAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCCAGCTTGGTCTTTTTGCTGTACAAATGAGCCTATAGTTGGTTAAT  675

seq1  TTGTACTATTTTTTGAGACTGAAGAACTAATAAGAGAAAGCTATGTATCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTACTATTTTTTGAGACTGAAGAACTAATAAGAGAAAGCTATGTATCA  725

seq1  CATGGAAGATGGTTCTGATAATTTGTACTATCCTATAGATGAGAAGAGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGAAGATGGTTCTGATAATTTGTACTATCCTATAGATGAGAAGAGAG  775

seq1  AAATGATTATGAGTTAGTGAAGATCATCCAACTAATGACTGGAGATATCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGATTATGAGTTAGTGAAGATCATCCAACTAATGACTGGAGATATCT  825

seq1  CACAGTTCAAATGCAAGCAATTTGCCTCCAGAGCTATGGGTTAGCTGTAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTTCAAATGCAAGCAATTTGCCTCCAGAGCTATGGGTTAGCTGTAG  875

seq1  GACTGCCCATTCTATCATTCCCCTGGAAAGTGGAAATTTTATTTTAACAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGCCCATTCTATCATTCCCCTGGAAAGTGGAAATTTTATTTTAACAT  925

seq1  TAGAAAAGTTCTATGGAATCGTATTGAGTTGACATTTTTGAGTTTTTCTC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAAGTTCTATGGAATCGTATTGAGTTGACATTTTTGAGTTTTTCTC  975

seq1  TCTTTTTTTTTTCTTCATACTTGTAGATAAGATATGGCTGAGGACTCTAG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTTTTTTTCTTCATACTTGTAGATAAGATATGGCTGAGGACTCTAG  1025

seq1  GAAGATTGCTTAAAATCATTGCAAACAATTTATCTTGGCTCTGGCTGAAT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATTGCTTAAAATCATTGCAAACAATTTATCTTGGCTCTGGCTGAAT  1075

seq1  TGTTAAAAATAATCTCTCAGCATTCCATATACTATTAAGTTTACTTTTCT  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAAAAATAATCTCTCAGCATTCCATATACTATTAAGTTTACTTTTCT  1125

seq1  ATGTTTATTGATAAACTTATCAATATTTTACCAACATTGCAAAGAATTC  1199
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTATTGATAAACTTATCAATATTTTACCAACATTGCAAAGAATTC  1174