BAC Information

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BAC

Clone NameB6Ng01-140L10
Chromosome4 (Build37)
Map Location 73,846,102 - 73,847,096
singlet/doubletsinglet
Overlap genenone
Upstream geneOTTMUSG00000001246, LOC100039726, LOC667722, LOC623115, OTTMUSG00000000281, OTTMUSG00000000280, OTTMUSG00000000282, OTTMUSG00000000283, Gm428, Rasef, LOC667768, LOC545637, LOC623272, OTTMUSG00000014862, OTTMUSG00000004010, 2310002L09Rik, Frmd3
Downstream geneLOC100039774, Jmjd2c, LOC100040258, LOC100039814, LOC636847
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-140L10.bB6Ng01-140L10.g
ACCDH939365DH939366
length1,246989
definitionDH939365|Mus musculus domesticus DNA, BAC clone: B6Ng01-140L10, 5' end.DH939366|Mus musculus domesticus DNA, BAC clone: B6Ng01-140L10, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttcatctgcttcagagctactaagagctggctccccgagcccat
ccagcgatgagcacaggctccttttcctagagacctccgctaattgatct
ttcttcttttccctttttcctctttttcttctaatctctctccaggtatt
cctacctaaccttaacttttcctcgggttcaagacccttggaaaggcctg
tatacttattttgtgtaccatattttctctttgctcctactctctctccc
cgctttacttctgatagcttgtcctgaatttcctctagaattttcagccc
tatcttaatcacttgataacatgtgaaaaggaacaaaagggcttctaaca
ctagaaaaaattcaaggccaaacattttccactttacttctgatagactg
tcttgaatttccttagaaagttcaaggccaggcttacctcgtaaagctat
actcactggtactctcgttccccagctgaaaagttctgaattcatacagt
tgaatccttcttaacagtctgctttacgggaacctttattaccgcgaccc
gcagttctggttctggaatgagggatcttccttgcgccagtcccgagttt
tttctcgtcccggaattcggcaccaattgttattagacgcgttctcacgc
ccggccaggaagaacaccacagaccagaatcttctgcggcaaagctttat
tgcttacatcttcaggagcaagagtgtaagaagcaagagagagcgaaaac
gaaaccccgtccctattaaggagaattctccttcgcctaggacgtgtcac
tccctgattggctgcagcccatcggccgagttgacgtcacggggaaggca
gagcacatggagtagagaaccaccctcggcatatgcgcagattatttgtt
taccacttagaacacagctgtcagcgccatcttgtaacggcgaatgtggg
cgcggctccacaacatgtctcttcttactttttttttttttttttttgaa
actttaggtgaaagtccattttttcgtataggatgactactcagcttgtt
tctaggaacatttttggaatgttttcaacttttaatctggagaaattggt
ggtcttttactgaaggtgagttctgtttgcagcaaggtgagccggtaata
tcagaccgttagtcatggctttttctgggaataggactttgtatctaagg
aaggatgtgcttcggattattggttagcagggaaaaggtaagtgac
gaattcactttgtagaccaggctggccttgaactcagaaatacaccttcc
tctgcctcccaagtgttgggattaaaggcatgcaccaccatgcccggcta
gctctgaactctttttctgtcctcgactctagactctgtttttctaagga
cagccgagtaagaaaaactcaacaaacacattcaggaaacaactacaagg
gggctgtttctgtgtcacattatacagtattctttctgcagttctgtgta
gagagttgttgaattcacgccagaactcatctgaagatttgttgcagcta
tgaggctcagcaaaagtacaacagtaaagtcttttcaagttagtgacaga
gagatgagttttacatcaagcacaacggagtgaagagtttcattcaattg
tttctggaacaggaactctttttttctagacagtggtgaaactcctaatt
tctagcactctaagactaatcacctttcctatttttctacttatgttcta
tgtctttctttttattattttatgtacaatatatgttgatcatattcttt
atcttcctttagctttttacaaatcttcacctccctgtgttttttctctc
cattctctctctctctctctctcacacacacacacaaacacacacacaca
aaacaaaataaaggtcaaagcaaacaaacaaataaacaaacaaaacaaag
aaaaaccaaaaacaaaaattaaataaaaaccatgagttcattttgtgttg
atcaatgactcctgggtgtggggccttctctggagtttggttcatttacc
tcgtgacactccactgtagaaaactggttttccatttcctagctggtgtc
aaatactttctgattcggctaggactctttgtgtcacttctcagcttaag
atcttgtttagtttgatctctgcaggactcgtgcatgcctgccagtctct
atgagtttaagtgagtatgagcctgatgtgttttgaaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_73846102_73847096
seq2: B6Ng01-140L10.g_70_1058 (reverse)

seq1  TCTTCAAAACACAACAGGCTCAATACTCACTTAAACTCATAGAGGCTGGC  50
      ||||||||||||| ||||||| |||||||||||||||||||||| |||||
seq2  TCTTCAAAACACATCAGGCTC-ATACTCACTTAAACTCATAGAGACTGGC  49

seq1  AGGCATGCACGAGTCCTGCAGAGATTCAAACTAAACAAGATCTTAAAGCT  100
      |||||||||||||||||||||||| ||||||||||||||||||| |||||
seq2  AGGCATGCACGAGTCCTGCAGAGA-TCAAACTAAACAAGATCTT-AAGCT  97

seq1  GAGAAGTGGACACAAAGAGTCCTAGCCCGAATCAAGAAGGTATTTGACAC  150
      ||||||| ||||||||||||||||| ||||||| |||| |||||||||||
seq2  GAGAAGT-GACACAAAGAGTCCTAG-CCGAATC-AGAAAGTATTTGACAC  144

seq1  CAGCTAGGAAATGGAAAACCAGTTTTCTACAGTGGAGTGTCACGAGGTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTAGGAAATGGAAAACCAGTTTTCTACAGTGGAGTGTCACGAGGTAA  194

seq1  ATGAACCAAACTCCAGAGAAGGCCCCACACCCAGGAGTCATTGATCAACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACCAAACTCCAGAGAAGGCCCCACACCCAGGAGTCATTGATCAACA  244

seq1  CAAAATGAACTCATGGTTTTTATTTAATTTTTGTTTTTGGTTTTTCTTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATGAACTCATGGTTTTTATTTAATTTTTGTTTTTGGTTTTTCTTTG  294

seq1  TTTTGTTTGTTTATTTGTTTGTTTGCTTTGACCTTTATTTTGTTTTGTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTTGTTTATTTGTTTGTTTGCTTTGACCTTTATTTTGTTTTGTGT  344

seq1  GTGTGTGTTTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAATGGAGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTTTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAATGGAGAG  394

seq1  AAAAAACACAGGGAGGTGAAGATTTGTAAAAAGCTAAAGGAAGATAAAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAACACAGGGAGGTGAAGATTTGTAAAAAGCTAAAGGAAGATAAAGA  444

seq1  ATATGATCAACATATATTGTACATAAAATAATAAAAAGAAAGACATAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGATCAACATATATTGTACATAAAATAATAAAAAGAAAGACATAGAA  494

seq1  CATAAGTAGAAAAATAGGAAAGGTGATTAGTCTTAGAGTGCTAGAAATTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAGTAGAAAAATAGGAAAGGTGATTAGTCTTAGAGTGCTAGAAATTA  544

seq1  GGAGTTTCACCACTGTCTAGAAAAAAAGAGTTCCTGTTCCAGAAACAATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTTTCACCACTGTCTAGAAAAAAAGAGTTCCTGTTCCAGAAACAATT  594

seq1  GAATGAAACTCTTCACTCCGTTGTGCTTGATGTAAAACTCATCTCTCTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAAACTCTTCACTCCGTTGTGCTTGATGTAAAACTCATCTCTCTGT  644

seq1  CACTAACTTGAAAAGACTTTACTGTTGTACTTTTGCTGAGCCTCATAGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAACTTGAAAAGACTTTACTGTTGTACTTTTGCTGAGCCTCATAGCT  694

seq1  GCAACAAATCTTCAGATGAGTTCTGGCGTGAATTCAACAACTCTCTACAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACAAATCTTCAGATGAGTTCTGGCGTGAATTCAACAACTCTCTACAC  744

seq1  AGAACTGCAGAAAGAATACTGTATAATGTGACACAGAAACAGCCCCCTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTGCAGAAAGAATACTGTATAATGTGACACAGAAACAGCCCCCTTG  794

seq1  TAGTTGTTTCCTGAATGTGTTTGTTGAGTTTTTCTTACTCGGCTGTCCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTGTTTCCTGAATGTGTTTGTTGAGTTTTTCTTACTCGGCTGTCCTT  844

seq1  AGAAAAACAGAGTCTAGAGTCGAGGACAGAAAAAGAGTTCAGAGCTAGCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAACAGAGTCTAGAGTCGAGGACAGAAAAAGAGTTCAGAGCTAGCC  894

seq1  GGGCATGGTGGTGCATGCCTTTAATCCCAACACTTGGGAGGCAGAGGAAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCATGGTGGTGCATGCCTTTAATCCCAACACTTGGGAGGCAGAGGAAG  944

seq1  GTGTATTTCTGAGTTCAAGGCCAGCCTGGTCTACAAAGTGAATTC  995
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTATTTCTGAGTTCAAGGCCAGCCTGGTCTACAAAGTGAATTC  989