BAC Information

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BAC

Clone NameB6Ng01-141N05
Chromosome4 (Build37)
Map Location 13,981,921 - 13,982,380
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039988, Runx1t1
Downstream geneLOC625831, LOC433687, LOC100040030, LOC433688, Slc26a7, 1700034K16Rik, Otud6b, LOC100040047, Tmem55a, OTTMUSG00000004551, Efcbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-141N05.bB6Ng01-141N05.g
ACCDH940180DH940181
length4541,184
definitionDH940180|Mus musculus domesticus DNA, BAC clone: B6Ng01-141N05, 5' end.DH940181|Mus musculus domesticus DNA, BAC clone: B6Ng01-141N05, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
ctgtaatatgaagagcaagcagtacatgtatatctgcaagcacagtccag
ctctatccactctcctctcctctcttttatttgcattaagaaagtgaaac
agtcaggactttgcatcagagtggtttgctaggccatgctcctcctttgt
agcccaggtgactgagtagaaataaaaatagaaaagcgatacaggagaaa
atgattcgagtgacaggagctcttcaggcaccgtgcctgcaatcgctgta
gtcactgagaagggaggctgaagcaaaatgacttgattgggaagccaaag
caagaggatgtcatgcaacaaaaacaacaaagccaataaacatataaaca
aacaagaaataataacacatacactttgaatctcattgatattttgtgca
tatgtgaatgtgtatgtagagagtgtgtgtttggtgcttgtatgtggtat
gtaa
gaattccaactcaaaggaccagaaaatattttcaatagaatgatagaaga
aaattgtcctaacctaaaaaggagaggcctataaaagtacaagaagcttg
cagaacaccacaataaattggatcagaaaagaaactactcttactatata
ataaatcagtaaatatgtagaacaaagaaagtgtattaaaagcacatagg
aaaaagacagagtagcatacattcaaattcccaatgcaaactctaaggat
caggaaggtttgaatagatgtgttgcaatctaagagaccacagatgctaa
ctcagattattatacccatcaaaatcttcaatcactatagataaggaaaa
caagatgttctatgataaagctgaactgaaatgatatctatcatctgtat
gctcagccatacagaaggtgatagaaggaaaattccagactaaacaggtt
aaatactcacacaaatacggggaaaataattataatagcatatcaggaaa
accaaaataagggaaacacacacacatacactcatgccctatcaccacca
ccaccaccaccaacaacaacaacaacaacaacaaaacaggaattaattat
tattggtcattggtaactctcaatgtcaatggcctcaataaaaagacaca
gattaacagaatggatatgtaacgggttcatcctcctgttacatacaaga
aacacacctgaatatcaaagatagacattaccccaggataaggagttgga
aaatatatgtcaagaaaatggccctaagaagaaaattgaagtagccattt
tagtatccaacacaaaagacttcaacccaaaataatcaaaaaagatggaa
aaggatactatatatttcctttaaggtaaacccaccaagataacacttcc
atgtttaacatttatgcatcaaatacaaggtgccctccctttgtaaaaca
acactattgcagtttaaattacacactgatcctcatacattgatagtgca
gacttcagtatcctacttcttctaatggacatgttatcagatgaaataaa
ccagagaaatgttgggttactgtgttataaccaatgaacttaaacggaat
ctataaaccttcactcaaacaaataagtactttttttcctaagactctct
gaaacttttccaattttgcaacattacttgagcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_13981921_13982380
seq2: B6Ng01-141N05.b_49_508

seq1  GAATTCCTGTAATATGAAGAGCAAGCAGTACATGTATATCTGCAAGCACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGTAATATGAAGAGCAAGCAGTACATGTATATCTGCAAGCACA  50

seq1  GTCCAGCTCTATCCACTCTCCTCTCCTCTCTTTTATTTGCATTAAGAAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAGCTCTATCCACTCTCCTCTCCTCTCTTTTATTTGCATTAAGAAAG  100

seq1  TGAAACAGTCAGGACTTTGCATCAGAGTGGTTTGCTAGGCCATGCTCCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACAGTCAGGACTTTGCATCAGAGTGGTTTGCTAGGCCATGCTCCTC  150

seq1  CTTTGTAGCCCAGGTGACTGAGTAGAAATAAAAATAGAAAAGCGATACAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTAGCCCAGGTGACTGAGTAGAAATAAAAATAGAAAAGCGATACAG  200

seq1  GAGAAAATGATTCGAGTGACAGGAGCTCTTCAGGCACCGTGCCTGCAATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAATGATTCGAGTGACAGGAGCTCTTCAGGCACCGTGCCTGCAATC  250

seq1  GCTGTAGTCACTGAGAAGGGAGGCTGAAGCAAAATGACTTGATTGGGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTAGTCACTGAGAAGGGAGGCTGAAGCAAAATGACTTGATTGGGAAG  300

seq1  CCAAAGCAAGAGGATGTCATGCAACAAAAACAACAAAGCCAATAAACATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGCAAGAGGATGTCATGCAACAAAAACAACAAAGCCAATAAACATA  350

seq1  TAAACAAACAAGAAATAATAACACATACACTTTGAATCTCATTGATATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACAAACAAGAAATAATAACACATACACTTTGAATCTCATTGATATTT  400

seq1  TGTGCATATGTGAATGTGTATGTAGAGAGTGTGTGTTTGGTGCTTGTATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCATATGTGAATGTGTATGTAGAGAGTGTGTGTTTGGTGCTTGTATG  450

seq1  TGGTATGTAA  460
      ||||||||||
seq2  TGGTATGTAA  460