BAC Information

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BAC

Clone NameB6Ng01-141P11
Chromosome4 (Build37)
Map Location 71,729,454 - 71,903,727
singlet/doubletdoublet
Overlap geneTle1
Upstream geneLOC100039565, LOC100039979, LOC667638, EG667649
Downstream geneAldoa-ps2, EG384113, LOC667713, LOC100039698
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-141P11.bB6Ng01-141P11.g
ACCDH940286DH940287
length7911,098
definitionDH940286|Mus musculus domesticus DNA, BAC clone: B6Ng01-141P11, 5' end.DH940287|Mus musculus domesticus DNA, BAC clone: B6Ng01-141P11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(71,729,454 - 71,730,244)(71,902,602 - 71,903,727)
sequence
gaattctacatcttgatccacaggcagaaaggagatactctgcttcacgt
tgggcatagcttgagcataggaaacctcaaaaccagcctcaacagggtga
aacacttcccccaacaaggccacaccaactccaacaaggccatatctact
aatagtgctacttccaatggaccaagcatttaaacacaggaatttatggg
ggattatacctattcaaaccattacgtaatataaaggtaatgatacttaa
atacaaacaatacattaccctgagtaacagtgaattatctaaattctgaa
caaccaggggtggtctataagtaaataattcagcaataaatagaaataaa
tggaattataaaacagaagtaggaataggaggggggggggaatcaaccca
ggtgtgcacacaggagcacaggagaaagaacaggctcaaatatgctgggc
tctgttttaaaatcacatctttgaaacactgacttcctggacttgtgccg
cagagactcctgaacatttccttgtaatttacttcttgctttttaacaca
aggaaaaggtgcttgcaaaaaaaaaaaaaaaaaaaaaaaaaagcaacctc
tctggattgttttctccctgcagtagtccagagcaaaaacccgtcctcac
ctaaaacaaacaaaatcaaaacccaaaccaaacaacaacaacttctacta
atatttaaggtctccaaagcagactggcaatgagtctctctaggataatc
atttgcaccctccttcgccacatgtaaatacaggctttatt
gaattcacagccgtagtcatgtctaggaactcttatttacacaccatgtc
tagcattgtgccaacaggtgagcacagaacctcttgaaatagaatctgtg
ggaactgcaagggagagatctactctaataaaacaaacctagtattctaa
gaattgtcaaaaacagcatccagtgctctgaaacatttgtttctattcat
ttctgtccaccctcccttcctcaataaaacgctttctgagaacacagtga
ttcatattttcctttcacacacagaatcaatcagttgttttgaatctcat
gttctgtcccattctttccatggaaggtaagcaactagtgaagaagaaag
aacggtagcaaaatgagggcagaaatacatagtgagcagaagaggtacca
tctctgctcgtcctaagtatcaacatgcaatgaacctgctatgtatgggg
aggaggacttttactcattaggggatttccaggcagaaacaggctctttc
tagttaaaggtagatgctggaagccaaagaacttgagtttgaataatata
cctctaacacttactttggataagtaatttaaattctctgtacctcaaat
ttcctttctgcaagatggagagaataacaataatgaactaacaattatta
aacacttgaaacaataatcactcactcattgttagctattgttactatat
tgttgccactgtccccctggagtatctccagatcgtaattataatccaaa
ctcattatattttcccccatgtaaatgctatcaagccaccataaagacag
gtataatgacctctagttactgaactctttgttataaaaatccacatgaa
acacttaaagctgacttaaccgtaaagatatatgagctactaaaaggact
caatttttccaggaatcctacttcaacacttcccttctgagcagtatcag
atgtacatagaaaagacacccctgtgttattgcatgtggaaacagcatat
tgatataagcatggagactttgagatgtgaaatattgttgagtcctgtat
aagcataagggagcatttctgaaagaaattaatgcacatgctctcaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_71729454_71730244
seq2: B6Ng01-141P11.b_50_840

seq1  GAATTCTACATCTTGATCCACAGGCAGAAAGGAGATACTCTGCTTCACGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACATCTTGATCCACAGGCAGAAAGGAGATACTCTGCTTCACGT  50

seq1  TGGGCATAGCTTGAGCATAGGAAACCTCAAAACCAGCCTCAACAGGGTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCATAGCTTGAGCATAGGAAACCTCAAAACCAGCCTCAACAGGGTGA  100

seq1  AACACTTCCCCCAACAAGGCCACACCAACTCCAACAAGGCCATATCTACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTTCCCCCAACAAGGCCACACCAACTCCAACAAGGCCATATCTACT  150

seq1  AATAGTGCTACTTCCAATGGACCAAGCATTTAAACACAGGAATTTATGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTGCTACTTCCAATGGACCAAGCATTTAAACACAGGAATTTATGGG  200

seq1  GGATTATACCTATTCAAACCATTACGTAATATAAAGGTAATGATACTTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTATACCTATTCAAACCATTACGTAATATAAAGGTAATGATACTTAA  250

seq1  ATACAAACAATACATTACCCTGAGTAACAGTGAATTATCTAAATTCTGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAAACAATACATTACCCTGAGTAACAGTGAATTATCTAAATTCTGAA  300

seq1  CAACCAGGGGTGGTCTATAAGTAAATAATTCAGCAATAAATAGAAATAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCAGGGGTGGTCTATAAGTAAATAATTCAGCAATAAATAGAAATAAA  350

seq1  TGGAATTATAAAACAGAAGTAGGAATAGGAGGGGGGGGGGAATCAACCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATTATAAAACAGAAGTAGGAATAGGAGGGGGGGGGGAATCAACCCA  400

seq1  GGTGTGCACACAGGAGCACAGGAGAAAGAACAGGCTCAAATATGCTGGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTGCACACAGGAGCACAGGAGAAAGAACAGGCTCAAATATGCTGGGC  450

seq1  TCTGTTTTAAAATCACATCTTTGAAACACTGACTTCCTGGACTTGTGCCG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTTTAAAATCACATCTTTGAAACACTGACTTCCTGGACTTGTGCCG  500

seq1  CAGAGACTCCTGAACATTTCCTTGTAATTTACTTCTTGCTTTTTAACACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGACTCCTGAACATTTCCTTGTAATTTACTTCTTGCTTTTTAACACA  550

seq1  AGGAAAAGGTGCTTGCAAAAAAAAAAAAAAAAAAAAAAAAAAGCAACCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAAGGTGCTTGCAAAAAAAAAAAAAAAAAAAAAAAAAAGCAACCTC  600

seq1  TCTGGATTGTTTTCTCCCTGCAGTAGTCCAGAGCAAAAACCCGTCCTCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGATTGTTTTCTCCCTGCAGTAGTCCAGAGCAAAAACCCGTCCTCAC  650

seq1  CTAAAACAAAC-AAATCAAAACCCAAACCAAACAACAACAACTTCTAACT  699
      ||||||||||| |||||||||||||||||||||||||||||||||| |||
seq2  CTAAAACAAACAAAATCAAAACCCAAACCAAACAACAACAACTTCT-ACT  699

seq1  AATATTTAAGGTCTCCAAAGCAGACTGGCAATGAGTCTCTCTAGGATAAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTAAGGTCTCCAAAGCAGACTGGCAATGAGTCTCTCTAGGATAAT  749

seq1  CATTTGCACCCTCCTTCAGCCACATGT-AATACAGGCTTTATT  791
      ||||||||||||||||| ||||||||| |||||||||||||||
seq2  CATTTGCACCCTCCTTC-GCCACATGTAAATACAGGCTTTATT  791

seq1: chr4_71902602_71903727
seq2: B6Ng01-141P11.g_68_1165 (reverse)

seq1  TTTGAGAGCATGGTTGGGCATTAATATTTCTTCAGAAATGCTTCCTTTAA  50
      ||||||||||    || |||||||| ||  |||||||||||| ||||  |
seq2  TTTGAGAGCA----TGTGCATTAAT-TTCTTTCAGAAATGCTCCCTT--A  43

seq1  TGGCTTATTTACAGGACTCCAAACAAATTTATTTCACCATTCTCAAAGTC  100
      | |||||  ||||||||||  |||||   ||||||||   ||||||||||
seq2  T-GCTTA--TACAGGACTC--AACAA---TATTTCAC--ATCTCAAAGTC  83

seq1  TTCCATGCTTATTTGGTTCTATATGCTGTTTTCCACATGCAAATAACACA  150
       |||||||||||     || |||||||| ||||||||||| |||||||||
seq2  -TCCATGCTTAT----ATCAATATGCTG-TTTCCACATGC-AATAACACA  126

seq1  GGGGTGTCTTTTCTATGTACATCTGATAACTGCCTCAGAAGGGAAGTGTT  200
      ||||||||||||||||||||||||||| |||| |||||||||||||||||
seq2  GGGGTGTCTTTTCTATGTACATCTGAT-ACTG-CTCAGAAGGGAAGTGTT  174

seq1  GAAGTAGGATTCCTGGAAAAATTGAGTCCTTTTAGTAGCTCATATTATCT  250
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GAAGTAGGATTCCTGGAAAAATTGAGTCCTTTTAGTAGCTCATA-TATCT  223

seq1  TTACGGTTAAGTCAGCTTTAAGTGTTTCATGTGGATTTTTATAACAAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACGGTTAAGTCAGCTTTAAGTGTTTCATGTGGATTTTTATAACAAAGA  273

seq1  GTTCAGTAACTAGAGGTCATTATACCTTGTCTTTATGGTGGCTTGATAGC  350
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GTTCAGTAACTAGAGGTCATTATACC-TGTCTTTATGGTGGCTTGATAGC  322

seq1  ATTTACATGGGGGAAAATATAATGAGTTTGGATTATAATTACGATCTGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACATGGGGGAAAATATAATGAGTTTGGATTATAATTACGATCTGGA  372

seq1  GATACTCCAGGGGGACAGTGGCAACAATATAGTAACAATAGCTAACAATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACTCCAGGGGGACAGTGGCAACAATATAGTAACAATAGCTAACAATG  422

seq1  AGTGAGTGATTATTGTTTCAAGTGTTTAATAATTGTTAGTTCATTATTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGTGATTATTGTTTCAAGTGTTTAATAATTGTTAGTTCATTATTGT  472

seq1  TATTCTCTCCATCTTGCAGAAAGGAAATTTGAGGTACAGAGAATTTAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTCTCCATCTTGCAGAAAGGAAATTTGAGGTACAGAGAATTTAAAT  522

seq1  TACTTATCCAAAGTAAGTGTTAGAGGTATATTATTCAAACTCAAGTTCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTATCCAAAGTAAGTGTTAGAGGTATATTATTCAAACTCAAGTTCTT  572

seq1  TGGCTTCCAGCATCTACCTTTAACTAGAAAGAGCCTGTTTCTGCCTGGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTCCAGCATCTACCTTTAACTAGAAAGAGCCTGTTTCTGCCTGGAA  622

seq1  ATCCCCTAATGAGTAAAAGTCCTCCTCCCCATACATAGCAGGTTCATTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCCTAATGAGTAAAAGTCCTCCTCCCCATACATAGCAGGTTCATTGC  672

seq1  ATGTTGATACTTAGGACGAGCAGAGATGGTACCTCTTCTGCTCACTATGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGATACTTAGGACGAGCAGAGATGGTACCTCTTCTGCTCACTATGT  722

seq1  ATTTCTGCCCTCATTTTGCTACCGTTCTTTCTTCTTCACTAGTTGCTTAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTGCCCTCATTTTGCTACCGTTCTTTCTTCTTCACTAGTTGCTTAC  772

seq1  CTTCCATGGAAAGAATGGGACAGAACATGAGATTCAAAACAACTGATTGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCATGGAAAGAATGGGACAGAACATGAGATTCAAAACAACTGATTGA  822

seq1  TTCTGTGTGTGAAAGGAAAATATGAATCACTGTGTTCTCAGAAAGCGTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTGTGTGAAAGGAAAATATGAATCACTGTGTTCTCAGAAAGCGTTT  872

seq1  TATTGAGGAAGGGAGGGTGGACAGAAATGAATAGAAACAAATGTTTCAGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGAGGAAGGGAGGGTGGACAGAAATGAATAGAAACAAATGTTTCAGA  922

seq1  GCACTGGATGCTGTTTTTGACAATTCTTAGAATACTAGGTTTGTTTTATT  1000
      |||||                  |||||||||||||||||||||||||||
seq2  GCACTNNNNNNNNNNNNNNNNNNTTCTTAGAATACTAGGTTTGTTTTATT  972

seq1  AGAGTAGATCTCTCCCTTGCAGTTCCCACAGATTCTATTTCAAGAGGTTC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTAGATCTCTCCCTTGCAGTTCCCACAGATTCTATTTCAAGAGGTTC  1022

seq1  TGTGCTCACCTGTTGGCACAATGCTAGACATGGTGTGTAAATAAGAGTTC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTCACCTGTTGGCACAATGCTAGACATGGTGTGTAAATAAGAGTTC  1072

seq1  CTAGACATGACTACGGCTGTGAATTC  1126
      ||||||||||||||||||||||||||
seq2  CTAGACATGACTACGGCTGTGAATTC  1098