BAC Information

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BAC

Clone NameB6Ng01-143D02
Chromosome4 (Build37)
Map Location 81,264,420 - 81,265,505
singlet/doubletsinglet
Overlap genenone
Upstream geneTyrp1, D4Bwg0951e, Mpdz, LOC100040131
Downstream geneLOC100040144, EG668895, LOC100040164, EG545641, Nfib
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-143D02.bB6Ng01-143D02.g
ACCDH941194DH941195
length1,2381,092
definitionDH941194|Mus musculus domesticus DNA, BAC clone: B6Ng01-143D02, 5' end.DH941195|Mus musculus domesticus DNA, BAC clone: B6Ng01-143D02, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatagggttatttgttt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaatgatcctttcccaatctgttggtggtct
ttttgtcttactgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagtacaagccattactgtt
ctgttcaggaatttttcccctgtgcccatatcttcaagtcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggattgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctctcttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgcctgtctctataccagtaccatgcagtttttaccacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tgtccttgagaagagtttttgctatcctaggttttttgttattccagatg
aatttgcaaattgctctttttaattcattgaagaattgatttggaatttt
gatggggattgtattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttcttaatttctttcttcagagacttgaagtttttatcatac
agatcttttcacttccttagttagagtcacggccgaggtattttatatta
tttgtgactattgagaaggtgtgtttccctatttcattctcagcctgttt
attctttgtataaagaaggccattgacttgttgagttattttatttccag
ctactcaccgaagcttttttcaggcttaggagttctctggaggattttaa
gggtcacttaatatacatcaatatcatctgcaaaggaaattggactccct
gtccaattgaatcccttgattcctttgtgcaagtctcatgcataactcca
gtcatagtgtgcattgagcgagggtagtatagacgtac
gaattctctgtgtgaggatgtctcacattcttacaagaaccaagaattgc
aggactattgctctgtattacagaagtaggaatgcctgtgggtgattaat
ctcaaacttaaggcaaaatgcgaatgatataaggtttcattgcctcattt
cctgagacaagaggacaggaaaaacagattggaagaccaggcccaataac
tctactgtttttcttataggttttcacagatacattgacgaacaaaattt
gggaaagctggatcaacagcagtaagtaatcaaagggtcatagctccttt
aatgtgaaaagcctcactctcagccacagcagtgtcccagctcatagtca
atgctgaggcccttccctgggcaaatgggccttgcttcatccatattcac
agcttcttctaggggcaatttcattcactaggtagtccctgtagctacag
aaagattagttttcattgccaaaagaagcaagcaaccaagagaagaagaa
atgcaatcacacatgtcaaagaattggattaaacattgcagggtaactgc
ggggccactcttagttgaatggatatttccatctactgtgctctgtttga
gatgtgacacaaaaatgtgcagcatagcataggccacaggtttccctatt
atgaagtactggaatttcattttgttcaggtctaatcctcccctctccca
gaatatccactaatagggttgaaaatgaggctttgtgttcaatccgtagc
actcacatacccaacattaggaatgttttgctgctgttgttttgtaactg
gaatgtgagatttctgagtgtgacctttgtagatgtcaatgtcagtgttg
caaaggttgccatccctgtgtttcagacatgcttcttctgtttctgctcc
ttctttctttctcctctcttttacatgcttaatactggccttctaaagaa
atttggatgaacccaatggttctacgaacgattatttaccttttggcgtt
ctaaaagcttctgtatgataagggttggatgatgtgactctgaaagagaa
tggaaagttgatttcttgggttctcaggctttatactttgta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_81264420_81265505
seq2: B6Ng01-143D02.g_69_1160

seq1  GAATTCTCTGTGTGAGGATGTCTCACATTCTTACAAGAACCAAGAATTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGTGTGAGGATGTCTCACATTCTTACAAGAACCAAGAATTGC  50

seq1  AGGACTATTGCTCTGTATTACAGAAGTAGGAATGCCTGTGGGTGATTAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTATTGCTCTGTATTACAGAAGTAGGAATGCCTGTGGGTGATTAAT  100

seq1  CTCAAACTTAAGGCAAAATGCGAATGATATAAGGTTTCATTGCCTCATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAACTTAAGGCAAAATGCGAATGATATAAGGTTTCATTGCCTCATTT  150

seq1  CCTGAGACAAGAGGACAGGAAAAACAGATTGGAAGACCAGGCCCAATAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGACAAGAGGACAGGAAAAACAGATTGGAAGACCAGGCCCAATAAC  200

seq1  TCTACTGTTTTTCTTATAGGTTTTCACAGATACATTGACGAACAAAATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACTGTTTTTCTTATAGGTTTTCACAGATACATTGACGAACAAAATTT  250

seq1  GGGAAAGCTGGATCAACAGCAGTAAGTAATCAAAGGGTCATAGCTCCTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAAGCTGGATCAACAGCAGTAAGTAATCAAAGGGTCATAGCTCCTTT  300

seq1  AATGTGAAAAGCCTCACTCTCAGCCACAGCAGTGTCCCAGCTCATAGTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGAAAAGCCTCACTCTCAGCCACAGCAGTGTCCCAGCTCATAGTCA  350

seq1  ATGCTGAGGCCCTTCCCTGGGCAAATGGGCCTTGCTTCATCCATATTCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGAGGCCCTTCCCTGGGCAAATGGGCCTTGCTTCATCCATATTCAC  400

seq1  AGCTTCTTCTAGGGGCAATTTCATTCACTAGGTAGTCCCTGTAGCTACAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCTTCTAGGGGCAATTTCATTCACTAGGTAGTCCCTGTAGCTACAG  450

seq1  AAAGATTAGTTTTCATTGCCAAAAGAAGCAAGCAACCAAGAGAAGAAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATTAGTTTTCATTGCCAAAAGAAGCAAGCAACCAAGAGAAGAAGAA  500

seq1  ATGCAATCACACATGTCAAAGAATTGGATTAAACATTGCAGGGTAACTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAATCACACATGTCAAAGAATTGGATTAAACATTGCAGGGTAACTGC  550

seq1  GGGGCCACTCTTAGTTGAATGGATATTTCCATCTACTGTGCTCTGTTTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCCACTCTTAGTTGAATGGATATTTCCATCTACTGTGCTCTGTTTGA  600

seq1  GATGTGACACAAAAATGTGCAGCATAGCATAGGCCACAGGTTTCCCTATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTGACACAAAAATGTGCAGCATAGCATAGGCCACAGGTTTCCCTATT  650

seq1  ATGAAGTACTGGAA-TTCATTTTGTTCAGGTCTAATCCTCCCCTCTCCCA  699
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  ATGAAGTACTGGAATTTCATTTTGTTCAGGTCTAATCCTCCCCTCTCCCA  700

seq1  GAATATCCACTAATAGGGTTGAAAATGAGGCTTTGTGTTCAATCCGTAGC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATCCACTAATAGGGTTGAAAATGAGGCTTTGTGTTCAATCCGTAGC  750

seq1  ACTCACATACCCAACATTAGGAATGTTTTGCTGCTGTTGTTTTGTAACTG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACATACCCAACATTAGGAATGTTTTGCTGCTGTTGTTTTGTAACTG  800

seq1  GAATGTGAGATTTCTGAGTGTGACCTTTGTAGATGTCAATGTCAGTGTTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTGAGATTTCTGAGTGTGACCTTTGTAGATGTCAATGTCAGTGTTG  850

seq1  CAAAGGTTGCCATCCCTGTGTTTCAGACATGCTTCTTCTGTTTCTGCTCC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGTTGCCATCCCTGTGTTTCAGACATGCTTCTTCTGTTTCTGCTCC  900

seq1  TTCTTTCTTTTCTTCCTCTCCTTTACATGCTT-ATACTGG-CTTCTAGAG  947
      ||||||||||   ||||||| ||||||||||| ||||||| |||||| ||
seq2  TTCTTTCTTT--CTCCTCTCTTTTACATGCTTAATACTGGCCTTCTAAAG  948

seq1  AAATTTGGATGAACCCATTGG-TCTACGAACGA-TATTTACCTATT-GCG  994
      ||||||||||||||||| ||| ||||||||||| ||||||||| || |||
seq2  AAATTTGGATGAACCCAATGGTTCTACGAACGATTATTTACCTTTTGGCG  998

seq1  TTCTAAAAGC-TCTGTATGATAAGGGTGGGATGATGTGACTCCTGAAAGA  1043
      |||||||||| |||||||||||||||| ||||||||||||| ||||||||
seq2  TTCTAAAAGCTTCTGTATGATAAGGGTTGGATGATGTGACT-CTGAAAGA  1047

seq1  GAATGG-AGGGTGATTTCTTGGGTCTCCAGGCTTT-GACTTTGTA  1086
      |||||| | | |||||||||||||   ||||||||  ||||||||
seq2  GAATGGAAAGTTGATTTCTTGGGTTCTCAGGCTTTATACTTTGTA  1092