BAC Information

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BAC

Clone NameB6Ng01-144F02
Chromosome4 (Build37)
Map Location 140,793,398 - 140,961,942
singlet/doubletdoublet
Overlap geneArhgef19, Epha2, Gm693, Clcnka, Clcnkb
Upstream geneIgsf21, LOC100040728, Arhgef10l, Rcc2, Padi6, Padi4, Padi3, Padi1, Padi2, Sdhb, Atp13a2, Mfap2, Crocc, Necap2, LOC638991, Spata21, D4Ertd22e, Fbxo42, 6330545A04Rik
Downstream geneHspb7, Gm694, Zbtb17, Spen, LOC100042951, B330016D10Rik, Fblim1, BC025833, Slc25a34, Plekhm2, Ddi2, Agmat, Dnajc16, Casp9, Ela2a, Ctrc, Efhd2, Fhad1, Tmem51, 9030409G11Rik, EG665983
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-144F02.bB6Ng01-144F02.g
ACCDH942027DH942028
length380456
definitionDH942027|Mus musculus domesticus DNA, BAC clone: B6Ng01-144F02, 5' end.DH942028|Mus musculus domesticus DNA, BAC clone: B6Ng01-144F02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(140,961,563 - 140,961,942)(140,793,398 - 140,793,859)
sequence
agggccagcacatgctaagcaagccctccgctactgagtgatagccatgc
ctagtccctggggttttatttaatggagaaagagaatatcaagctggatc
cttagtgaagaatgggaagaatgcctacgactctcaagatgcccggaaac
tccctccatgcatccaggctattccctgtatccacgctagccccggcaca
cagtaggatctcagattggagtgtacctctgggatcatttttccattgac
ctgactcagattttaaacaactgcaagggaaacagagaagaaggacagcc
cagctgtgacaccgatatgtcaagaggctaatgtccatagcttccacctc
ttaaaatgtggtggggttgggggtagggtg
ttgacagaggaaacagaggttcagtgggggcagaggctgagattggagga
ggggcaatagaatagggaaacagtagtaggtgtggtcacatacagtttta
atcccagcactcaggtgacagaggcaggtggatctgtcagttagaggcca
acccggtctacagagggagttccaggccagccagggccacatagtgagaa
aaggaaaagaaaaaaatgaaagaaaagaagagaaaagaaaagaaaaaaaa
gctgggcatggtgacacacgcctttaatctcagcacttgggaggcagagg
caggcagatttctgagttcgaggccagcctggtctacaaagtgagttcca
ggacagccagggctatacagagaaaccctgtctcgaaaaaccaaaaaaaa
aaaaaggaaggaaagaagaagaagaaggagaaagagggaggaggaggagg
aggagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_140961563_140961942
seq2: B6Ng01-144F02.b_52_431 (reverse)

seq1  CACCCTACCCCCAACCCCACCACATTTTAAGAGGTGGAAGCTATGGACAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCTACCCCCAACCCCACCACATTTTAAGAGGTGGAAGCTATGGACAT  50

seq1  TAGCCTCTTGACATATCGGTGTCACAGCTGGGCTGTCCTTCTTCTCTGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCTCTTGACATATCGGTGTCACAGCTGGGCTGTCCTTCTTCTCTGTT  100

seq1  TCCCTTGCAGTTGTTTAAAATCTGAGTCAGGTCAATGGAAAAATGATCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTGCAGTTGTTTAAAATCTGAGTCAGGTCAATGGAAAAATGATCCC  150

seq1  AGAGGTACACTCCAATCTGAGATCCTACTGTGTGCCGGGGCTAGCGTGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTACACTCCAATCTGAGATCCTACTGTGTGCCGGGGCTAGCGTGGA  200

seq1  TACAGGGAATAGCCTGGATGCATGGAGGGAGTTTCCGGGCATCTTGAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGGGAATAGCCTGGATGCATGGAGGGAGTTTCCGGGCATCTTGAGAG  250

seq1  TCGTAGGCATTCTTCCCATTCTTCACTAAGGATCCAGCTTGATATTCTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTAGGCATTCTTCCCATTCTTCACTAAGGATCCAGCTTGATATTCTCT  300

seq1  TTCTCCATTAAATAAAACCCCAGGGACTAGGCATGGCTATCACTCAGTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCATTAAATAAAACCCCAGGGACTAGGCATGGCTATCACTCAGTAG  350

seq1  CGGAGGGCTTGCTTAGCATGTGCTGGCCCT  380
      ||||||||||||||||||||||||||||||
seq2  CGGAGGGCTTGCTTAGCATGTGCTGGCCCT  380

seq1: chr4_140793398_140793859
seq2: B6Ng01-144F02.g_66_527

seq1  GAATTCTTGACAGAGGAAACAGAGGTTCAGTGGGGGCAGAGGCTGAGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGACAGAGGAAACAGAGGTTCAGTGGGGGCAGAGGCTGAGATT  50

seq1  GGAGGAGGGGCAATAGAATAGGGAAACAGTAGTAGGTGTGGTCACATACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGAGGGGCAATAGAATAGGGAAACAGTAGTAGGTGTGGTCACATACA  100

seq1  GTTTTAATCCCAGCACTCAGGTGACAGAGGCAGGTGGATCTGTCAGTTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTAATCCCAGCACTCAGGTGACAGAGGCAGGTGGATCTGTCAGTTAG  150

seq1  AGGCCAACCCGGTCTACAGAGGGAGTTCCAGGCCAGCCAGGGCCACATAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCAACCCGGTCTACAGAGGGAGTTCCAGGCCAGCCAGGGCCACATAG  200

seq1  TGAGAAAAGGAAAAGAAAAAAATGAAAGAAAAGAAGAGAAAAGAAAAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAAAGGAAAAGAAAAAAATGAAAGAAAAGAAGAGAAAAGAAAAGAA  250

seq1  AAAAAAGCTGGGCATGGTGACACACGCCTTTAATCTCAGCACTTGGGAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGCTGGGCATGGTGACACACGCCTTTAATCTCAGCACTTGGGAGG  300

seq1  CAGAGGCAGGCAGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAGTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGCAGGCAGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAGTGA  350

seq1  GTTCCAGGACAGCCAGGGCTATACAGAGAAACCCTGTCTCGAAAAACCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCAGGACAGCCAGGGCTATACAGAGAAACCCTGTCTCGAAAAACCAA  400

seq1  AAAAAAAAAAAGGAAGGAAAGAAGAAGAAGAAGGAGAAAGAGGGAGGAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAGGAAGGAAAGAAGAAGAAGAAGGAGAAAGAGGGAGGAGG  450

seq1  AGGAGGAGGAGG  462
      ||||||||||||
seq2  AGGAGGAGGAGG  462