BAC Information

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BAC

Clone NameB6Ng01-144I08
Chromosome4 (Build37)
Map Location 82,931,672 - 82,932,218
singlet/doubletsinglet
Overlap gene1810054D07Rik
Upstream geneNfib, Zdhhc21, Cer1, Frem1, LOC667985
Downstream geneSnapc3, Psip1, LOC100040611, 4930473A06Rik, LOC668010, Bnc2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-144I08.bB6Ng01-144I08.g
ACCDH942178DH942179
length1,271541
definitionDH942178|Mus musculus domesticus DNA, BAC clone: B6Ng01-144I08, 5' end.DH942179|Mus musculus domesticus DNA, BAC clone: B6Ng01-144I08, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccatgatcgtgggcccactgtcgtacttctctggctgtgaaatga
gttccttggtcagaagcaatactgtgtggaataccatgacgatagatgag
gcattctgtcagtccgtgaatggtggttttagcagaggcattacgtgcag
gaaaggcaaatccataaccagaataagtatctactccagtaagaacaaaa
cgctgtcctttccacgaaggaagtggtccaatgtagtcaacctgccacca
ggttgctggctggtcacctcgaggaatggtgccatatctggggctcagtg
ttggtttctgctgttggcagatctggcaatcagcagcagctgtagccagg
tcagctttggtgagtggaagcccgtgttgctgagcccaagcataacctcc
atctcgaccaccatggccactttgttcatgtgcccattgagcaatgacag
ggatggctggggagagaggctgactgtccacagaacgggtcatcttatcc
acttgattattgaactcctcctcggctgaagtcaccttttggtgagcatt
tacatgggacacaaatatcttcacatcctttgcccatttggagagatcta
tccacatacttcttccccagatgtctttctcaccaattttccaattgtga
tctttccaagtccctgaccatccagccaatccattggctacagcccatga
gtcagtgtataatcgtacatctggccatttcttcttgcaaacaaactgta
ataccatgtgtactgcccaaagttctgcccactgtgaagatttcccttca
cctgtgtctttcaaggttgtcccagaaaggggttgtaatgctgcagctgt
ccacttctgggtggtgcctgcataacgtgcagagccatcagtaaaccagg
ctctagtcttctcctcttcggtcagttgatcatagggaacaccccatgag
ctatagtgcatgcttgcagcagatggcattgtaacaggagtagaaaccat
aggcatttgagcacttcttcatgtaacttgctggtgcttcaggacctgct
ctggccgatcacgtaaataccacttccatttgaaaataaaactgctgctg
ggcccgtccaaatttattgaacttgcaaggctgtaagaaccagcctcatg
tagtgggagttcaggtgcatttggaccttgggtccctattgtgaccacgc
tcagttccttaagcaagccaggccaagagccgtgtttcaggagaatagtt
gctcgccagaaatgtgtgatg
atcatgtagctgagactggaaaatcctgattcttctgcccccacctcccc
agttagggattacaggcatgtgataccacatccagatactacttttatta
tcagaaacaataatgggtcctataagaagacactttcagctctgttgtga
gctgagcccttgctagatggcactaagttttagcttcagaatcttgctta
gttaggctctctggagtagagttctttaaagatgatgtttttggttttgg
attagccaaatccacttcaagaactgggcttgataaggtgtatctatatt
agcctagaatttgggaagaggaggcagaaggatcctgagttcaggatagc
ctgggctacagagctagagtccatgtcaacaatcaaaactcaaagatagt
gctcgcttcggcagcacatatactaaaattggaacgatacagaaaagatt
agcatggcccctgcacaaggatgacacacaaatttgtgaagtgttccata
tttttaagaagcgggagtgggtgggtaggggagcagggcgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_82931672_82932218
seq2: B6Ng01-144I08.g_67_613 (reverse)

seq1  CCGCCCTGCTCCCCTACCCACCCACTCCCGCTTCTTAAAAATATGGAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCCCTGCTCCCCTACCCACCCACTCCCGCTTCTTAAAAATATGGAACA  50

seq1  CTTCACAAATTTGTGTGTCATCCTTGTGCAGGGGCCATGCTAATCTTTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACAAATTTGTGTGTCATCCTTGTGCAGGGGCCATGCTAATCTTTTC  100

seq1  TGTATCGTTCCAATTTTAGTATATGTGCTGCCGAAGCGAGCACTATCTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATCGTTCCAATTTTAGTATATGTGCTGCCGAAGCGAGCACTATCTTT  150

seq1  GAGTTTTGATTGTTGACATGGACTCTAGCTCTGTAGCCCAGGCTATCCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTTGATTGTTGACATGGACTCTAGCTCTGTAGCCCAGGCTATCCTG  200

seq1  AACTCAGGATCCTTCTGCCTCCTCTTCCCAAATTCTAGGCTAATATAGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCAGGATCCTTCTGCCTCCTCTTCCCAAATTCTAGGCTAATATAGAT  250

seq1  ACACCTTATCAAGCCCAGTTCTTGAAGTGGATTTGGCTAATCCAAAACCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCTTATCAAGCCCAGTTCTTGAAGTGGATTTGGCTAATCCAAAACCA  300

seq1  AAAACATCATCTTTAAAGAACTCTACTCCAGAGAGCCTAACTAAGCAAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACATCATCTTTAAAGAACTCTACTCCAGAGAGCCTAACTAAGCAAGA  350

seq1  TTCTGAAGCTAAAACTTAGTGCCATCTAGCAAGGGCTCAGCTCACAACAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAAGCTAAAACTTAGTGCCATCTAGCAAGGGCTCAGCTCACAACAG  400

seq1  AGCTGAAAGTGTCTTCTTATAGGACCCATTATTGTTTCTGATAATAAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGAAAGTGTCTTCTTATAGGACCCATTATTGTTTCTGATAATAAAAG  450

seq1  TAGTATCTGGATGTGGTATCACATGCCTGTAATCCCTAACTGGGGAGGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTATCTGGATGTGGTATCACATGCCTGTAATCCCTAACTGGGGAGGTG  500

seq1  GGGGCAGAAGAATCAGGATTTTCCAGTCTCAGCTACATGATGAATTC  547
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCAGAAGAATCAGGATTTTCCAGTCTCAGCTACATGATGAATTC  547