BAC Information

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BAC

Clone NameB6Ng01-145A08
Chromosome4 (Build37)
Map Location 56,966,954 - 57,132,139
singlet/doubletdoublet
Overlap gene6430704M03Rik, Epb4.1l4b
Upstream geneActl7b, Actl7a, Ikbkap, BC026590, Ctnnal1, D730040F13Rik
Downstream genePtpn3, LOC100041460, 1700042G15Rik, LOC100041342, LOC619973, LOC667049, Palm2, LOC100041513, Akap2, D630039A03Rik, Txn1, Txndc8, Svep1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-145A08.bB6Ng01-145A08.g
ACCDH942542DH942543
length1,097143
definitionDH942542|Mus musculus domesticus DNA, BAC clone: B6Ng01-145A08, 5' end.DH942543|Mus musculus domesticus DNA, BAC clone: B6Ng01-145A08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(56,966,954 - 56,968,055)(57,131,993 - 57,132,139)
sequence
gaattctgtttttactttgttatactttcacttccattgggagaaagtgg
gtgatgggaagcattgaaggctgaagtctgtgataaaatgtatacataga
tagatagatagatagatagatagatagatagatagatagatagatagata
gatagacttatggactgtcccagtacgcaggagtcagaggcaggtgtttc
tctgtgagttcaagtccagcctggtttacaaagcaagaaaggacagccag
ggctattatacaaagaaaccttgtctcaaaaaaccaaaggaaaaaaaaaa
aaagaaagaataaaataatggactagatgtcagaattatctgttcagaaa
cagaataaccataaatgtccttacctggtggctccctagtttcagaggaa
tgactgacattttctctgaaatagttgacatttgaaccgttagggatcag
aatttcgaatgctggaccatccatcccttccttagctgtgtgccctaaaa
cacacaaaggttgaagccacccagtggcataaatatccagccttccactg
tggctctgaataagacagaaagcagaagatggtgggtgtatttcaaatga
acacactgatctgttttattgctaaactatcttgtttgtttgtttgtttg
cttgcttgcttgtctacataatgtcttgtaatggctctgctaatctcaaa
ctcaggatcctccagcttcagcttccttagtgctgagacgacaggcgtct
tctcacccagctaaacagaactgctcatttacagatgaggtaagcccctg
atgctttctaccctacacattacacacttgtacacccagtactatgacag
tgtcgcttcagcctctggcaggcctctcaacctaccttcattcatgcatt
atgatccatcacaactgcagtcagtatcatctctttttttgtttgttttt
tgtttttgtttttctgagacagggtttctctgtatagccctggaagtctt
gaaactcgctggcttcaactcagaaatcaactgcctctgcttcttaagta
ctgggattaaaggtgcacccaccctggctggctaagtatatctctta
ccggggttgggggtgggggagaggtgtgtgccaaatactttacacatgat
tcacagggctgccctgtttcaagccccatctctgacatagaagacatcca
cgctgtagatgcatgtttatgctcccctgggtaccagttgatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_56966954_56968055
seq2: B6Ng01-145A08.b_46_1142

seq1  GAATTCTGTTTTTACTTTGTTATACTTTCACTTCCATTGGGAGAAAGTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTTTTTACTTTGTTATACTTTCACTTCCATTGGGAGAAAGTGG  50

seq1  GTGATGGGAAGCATTGAAGGCTGAAGTCTGTGATAAAATGTATACATAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATGGGAAGCATTGAAGGCTGAAGTCTGTGATAAAATGTATACATAGA  100

seq1  TAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA  150

seq1  GATAGACTTATGGACTGTCCCAGTACGCAGGAGTCAGAGGCAGGTGTTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGACTTATGGACTGTCCCAGTACGCAGGAGTCAGAGGCAGGTGTTTC  200

seq1  TCTGTGAGTTCAAGTCCAGCCTGGTTTACAAAGCAAGAAAGGACAGCCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGAGTTCAAGTCCAGCCTGGTTTACAAAGCAAGAAAGGACAGCCAG  250

seq1  GGCTATTATACAAAGAAACCTTGTCTCAAAAAACCAAAGGAAAAAAAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTATTATACAAAGAAACCTTGTCTCAAAAAACCAAAGGAAAAAAAAAA  300

seq1  AAAGAAAGAATAAAATAATGGACTAGATGTCAGAATTATCTGTTCAGAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAGAATAAAATAATGGACTAGATGTCAGAATTATCTGTTCAGAAA  350

seq1  CAGAATAACCATAAATGTCCTTACCTGGTGGCTCCCTAGTTTCAGAGGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATAACCATAAATGTCCTTACCTGGTGGCTCCCTAGTTTCAGAGGAA  400

seq1  TGACTGACATTTTCTCTGAAATAGTTGACATTTGAACCGTTAGGGATCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGACATTTTCTCTGAAATAGTTGACATTTGAACCGTTAGGGATCAG  450

seq1  AATTTCGAATGCTGGACCATCCATCCCTTCCTTAGCTGTGTGCCCTAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCGAATGCTGGACCATCCATCCCTTCCTTAGCTGTGTGCCCTAAAA  500

seq1  CACACAAAGGTTGAAGCCACCCAGTGGCATAAATATCCAGCCTTCCACTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAAAGGTTGAAGCCACCCAGTGGCATAAATATCCAGCCTTCCACTG  550

seq1  TGGCTCTGAATAAGACAGAAAGCAGAAGATGGTGGGTGTATTTCAAATGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTCTGAATAAGACAGAAAGCAGAAGATGGTGGGTGTATTTCAAATGA  600

seq1  ACACACTGATCTGTTTTATTGCTAAACTATCTTGTTTGTTTGTTTGTTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACTGATCTGTTTTATTGCTAAACTATCTTGTTTGTTTGTTTGTTTG  650

seq1  CTTGCTTGCTTGTCTACATAATGTCTTGTAATGGCTCTGCTAATCTCAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTTGCTTGTCTACATAATGTCTTGTAATGGCTCTGCTAATCTCAAA  700

seq1  CTCAGGATCCTCCAGCTTCAGCTTCCTTAGTGCTGAGACGACAGGCGTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGATCCTCCAGCTTCAGCTTCCTTAGTGCTGAGACGACAGGCGTCT  750

seq1  TCTCACCCAGCTAAACAGAACTGCTCATTTACAGATGAGGTAAGCCCCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACCCAGCTAAACAGAACTGCTCATTTACAGATGAGGTAAGCCCCTG  800

seq1  ATGCTTTCTACCCTACACATTACACACTTGTACACCCAGTACTATGACAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTTCTACCCTACACATTACACACTTGTACACCCAGTACTATGACAG  850

seq1  TGTCGCTTCAGCCTCTGGCAGGCCTCTCAACCTACCTTCATTCATGCATT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCGCTTCAGCCTCTGGCAGGCCTCTCAACCTACCTTCATTCATGCATT  900

seq1  ATGATCCATCAC-ACTGCAGTCAGTATCATCTCTTTTTTTTGTTTGTTTT  949
      |||||||||||| |||||||||||||||||||| ||||||||||||||||
seq2  ATGATCCATCACAACTGCAGTCAGTATCATCTC-TTTTTTTGTTTGTTTT  949

seq1  TTGTTTTTGTTTTTCTGAGACAGGGTTTCTCTGTATAGCCCTGGAAGTCC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TTGTTTTTGTTTTTCTGAGACAGGGTTTCTCTGTATAGCCCTGGAAGTCT  999

seq1  TGGAACTCGCTGGCCTCAAACTCAGAAATCCACCTGCCTCTGCCTCCTAA  1049
      || ||||||||||| || ||||||||||| || |||||||||| || |||
seq2  TGAAACTCGCTGGCTTC-AACTCAGAAAT-CAACTGCCTCTGCTTCTTAA  1047

seq1  GTACTGGGATTAAAGGCGTGCACCACCACTGCCTGGCTTAGTATCATCTC  1099
      |||||||||||||||  |||||||  | ||| |||||| ||||| |||||
seq2  GTACTGGGATTAAAG--GTGCACCCACCCTGGCTGGCTAAGTAT-ATCTC  1094

seq1  TTA  1102
      |||
seq2  TTA  1097

seq1: chr4_57131993_57132139
seq2: B6Ng01-145A08.g_72_214 (reverse)

seq1  AATCAACTGGTGCCCAGGGGAGCAGTAACATGCAACTACAGCGTGGATGT  50
      ||||||||||| ||||||||||||  |||||||| |||||||||||||||
seq2  AATCAACTGGTACCCAGGGGAGCATAAACATGCATCTACAGCGTGGATGT  50

seq1  CTTCTATGTCAGAGATGGGGCTTGAAACAGGGCAGCCCTGTGAATCAAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CTTCTATGTCAGAGATGGGGCTTGAAACAGGGCAGCCCTGTGAATCATGT  100

seq1  GTGGAAGTACTTTTGTGCACACACCTCTCCCCCACCCCCAACCCCGG  147
      ||  |||||  |||| |||||||||||||||||||||||||||||||
seq2  GT-AAAGTA--TTTG-GCACACACCTCTCCCCCACCCCCAACCCCGG  143