BAC Information

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BAC

Clone NameB6Ng01-145D17
Chromosome4 (Build37)
Map Location 54,865,208 - 54,936,836
singlet/doubletdoublet
Overlap geneLOC384018
Upstream geneTmem38b, LOC670124, LOC100041280, LOC666901, LOC100041303
Downstream geneEG666920, Zfp462, LOC670211, Rad23b, LOC666953, LOC100041348, Klf4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-145D17.bB6Ng01-145D17.g
ACCDH942695DH942696
length1,0971,051
definitionDH942695|Mus musculus domesticus DNA, BAC clone: B6Ng01-145D17, 5' end.DH942696|Mus musculus domesticus DNA, BAC clone: B6Ng01-145D17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(54,935,731 - 54,936,836)(54,865,208 - 54,866,274)
sequence
gaattccagtgcttcaagagataaagtcaatctgtacggttgaaaagaat
ataagttgtccttgacagcacccaaagtcaggaaaatacacatagaaaag
aaactataagtgcttatggcaatgtagaatggaagagaccagttgattat
gttgcattctccaataaaacaggtcattatgtcaccaaaaaaaaaaaaaa
aaaaaaagaaaaaaagaaagaaagcaactgtatcactggtgtcaggcaga
tgagatggctccatggttcagagcacttgcttctcttctggagtacatga
atgcacttcccagcattcctaaagggaatgctctcctaaagggaggtgct
caatggtcttaactcctactccaggggattggatgccctcttctggcctt
tatggataccagcacataagtggcatacgtgcgtgcttgtacacacacac
agaaataatgaatctttaaaaacaaaacaaaacaaaacaaaacaaaacat
tcatgttttatgattttagaaagaccaaagctggttcaatctccaacata
gaggagaggtgttagaacatagagcatacagacttgcattcattcaaatt
tctgtattttcattaatattagctcatttgcattgatggaaaaaaattta
agatatgttgccacattggaaaaaaaactcacacatctttcaaatattac
aattttatattatttgattttgcatttatatctttttttaaaaattaatt
tattttttaaattccatattccattccctgccccccttcaccctctgtct
gctctacatcccacacttcctccccatcccctttctccacctggatgccc
ccacccccaccccacctgacctctaaactccccggggcctccagtctctt
gagggttaagttgcttcatctctgaatgacacagacccgggagtccttta
tatcaccttatatcatattctaattttttatgtcatttgtatgtttgtat
gtgctagagtgtgcatacatgggtgcttgtgaggtccacagactacttta
gacgagtttttctactctgtggtgctgggattgactcaggtcatcag
gaattcaagagacttgagaatgtgactgtggctttgacaagaggttgtaa
gaggtagactcaagagacaaatttactataggtcagaagacgatctattg
aggagagtattagaagcctggaaaagcttgttcttctacactacgtggga
gcaatgtcacaagacccaacggcttactcttttaatgcccccaccagctt
tatcaatttttcatctttggatgatgaagaggatactgaaaatatagact
catgttttaatgagaagaccaacttgattaacaacttgggaacaactttc
tttggcagagtagaataggagagttttcagggaaagacttccttgagaaa
agccaaacttcaacaaggctgtgtcacaccattgaaggcagttgacaaca
cttactacaaagagacagaaaaggaaaatcttcaggaacaatctatccca
tgaaatgattgttcttccctgaacgctaagagagctatatcaggaaatat
tcctgtccagctgcagagaagatctgttagactctctactcagaaggagc
agaaggagaaaaaccatgttgtctctgttgaaatgaaaaacaagagatgc
actgctccctagctgactgtccccccaacaaaagaatgaaagtttctcat
aaaaagaaaccagaggaagaggaagaaggcagtgcttcagctactacaag
aaaggatgaaagagaaaccctggagaaagccaagggcaaacacactgtgc
ctggtgggccacctgcaatggagaggttcttaagagaactgatgagcaag
agatagagaaaaggctgagaatgcagcagaagtggtggagatgcggagga
agaacgaagagtttaagaagatcactctcacagggccagggcaacctgtg
aagaaatccacgagctaggtaccaaaacaggtgactttcacttcctcaag
atgagcaatcaacaacagtgcaggaccaggagagtataggaagtgactca
tgtctgactttgaaacatcttccactctgctggagggacaagggatgtac
t
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_54935731_54936836
seq2: B6Ng01-145D17.b_48_1144 (reverse)

seq1  CTGATGACCTGAGTTCAATCCCCAGCAACCACAGAGTAGAAAAACCTCGT  50
      ||||||||||||| ||||| |||||| ||||||||||||||||| |||||
seq2  CTGATGACCTGAG-TCAAT-CCCAGC-ACCACAGAGTAGAAAAA-CTCGT  46

seq1  CCTAAAAGTAGTTCTGT-GACCTCCACAAGCACCCCATGTTATGCACACT  99
      |   ||||||| ||||| ||||| |||||||| |||||| ||||||||||
seq2  C--TAAAGTAG-TCTGTGGACCT-CACAAGCA-CCCATG-TATGCACACT  90

seq1  CTAGCACATACAAACATACAAATGACATAAAAAATTAGAATATGAATATA  149
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CTAGCACATACAAACATACAAATGACATAAAAAATTAGAATATG-ATATA  139

seq1  A-GTGATATAAAGGACTTCCGGGTCTGTGTTCATTCAGAGATGAAGC-AC  197
      | ||||||||||||||| ||||||||||| ||||||||||||||||| ||
seq2  AGGTGATATAAAGGACTCCCGGGTCTGTG-TCATTCAGAGATGAAGCAAC  188

seq1  CTAACCCTCAAGAGACTGGAGGCCCCGGGGAGTTTAGAGGTCAGGTGGGG  247
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACCCTCAAGAGACTGGAGGCCCCGGGGAGTTTAGAGGTCAGGTGGGG  238

seq1  TGGGGGTGGGGGCATCCAGGTGGAGAAAGGGGATGGGGAGGAAGTGTGGG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGGTGGGGGCATCCAGGTGGAGAAAGGGGATGGGGAGGAAGTGTGGG  288

seq1  ATGTAGAGCAGACAGAGGGTGAAGGGGGGCAGGGAATGGAATATGGAATT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAGAGCAGACAGAGGGTGAAGGGGGGCAGGGAATGGAATATGGAATT  338

seq1  TAAAAAATAAATTAATTTTTAAAAAAAGATATAAATGCAAAATCAAATAA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAATAAATTAATTTTTAAAAAAAGATATAAATGCAAAATCAAATAA  388

seq1  TATAAAATTGTAATATTTGAAAGATGTGTGAGTTTTTTTTCCAATGTGGC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAATTGTAATATTTGAAAGATGTGTGAGTTTTTTTTCCAATGTGGC  438

seq1  AACATATCTTAAATTTTTTTCCATCAATGCAAATGAGCTAATATTAATGA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATATCTTAAATTTTTTTCCATCAATGCAAATGAGCTAATATTAATGA  488

seq1  AAATACAGAAATTTGAATGAATGCAAGTCTGTATGCTCTATGTTCTAACA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACAGAAATTTGAATGAATGCAAGTCTGTATGCTCTATGTTCTAACA  538

seq1  CCTCTCCTCTATGTTGGAGATTGAACCAGCTTTGGTCTTTCTAAAATCAT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCCTCTATGTTGGAGATTGAACCAGCTTTGGTCTTTCTAAAATCAT  588

seq1  AAAACATGAATGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTTAAAGATTC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACATGAATGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTTAAAGATTC  638

seq1  ATTATTTCTGTGTGTGTGTACAAGCACGCACGTATGCCACTTATGTGCTG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTTCTGTGTGTGTGTACAAGCACGCACGTATGCCACTTATGTGCTG  688

seq1  GTATCCATAAAGGCCAGAAGAGGGCATCCAATCCCCTGGAGTAGGAGTTA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCCATAAAGGCCAGAAGAGGGCATCCAATCCCCTGGAGTAGGAGTTA  738

seq1  AGACCATTGAGCACCTCCCTTTAGGAGAGCATTCCCTTTAGGAATGCTGG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCATTGAGCACCTCCCTTTAGGAGAGCATTCCCTTTAGGAATGCTGG  788

seq1  GAAGTGCATTCATGTACTCCAGAAGAGAAGCAAGTGCTCTGAACCATGGA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGCATTCATGTACTCCAGAAGAGAAGCAAGTGCTCTGAACCATGGA  838

seq1  GCCATCTCATCTGCCTGACACCAGTGATACAGTTGCTTTCTTTCTTTTTT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATCTCATCTGCCTGACACCAGTGATACAGTTGCTTTCTTTCTTTTTT  888

seq1  TCTTTTTTTTTTTTTTTTTTTTTGGTGACATAATGACCTGTTTTATTGGA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTTTTTTTTTTTTTTTTTTGGTGACATAATGACCTGTTTTATTGGA  938

seq1  GAATGCAACATAATCAACTGGTCTCTTCCATTCTACATTGCCATAAGCAC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGCAACATAATCAACTGGTCTCTTCCATTCTACATTGCCATAAGCAC  988

seq1  TTATAGTTTCTTTTCTATGTGTATTTTCCTGACTTTGGGTGCTGTCAAGG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAGTTTCTTTTCTATGTGTATTTTCCTGACTTTGGGTGCTGTCAAGG  1038

seq1  ACAACTTATATTCTTTTCAACCGTACAGATTGACTTTATCTCTTGAAGCA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACTTATATTCTTTTCAACCGTACAGATTGACTTTATCTCTTGAAGCA  1088

seq1  CTGGAATTC  1106
      |||||||||
seq2  CTGGAATTC  1097

seq1: chr4_54865208_54866274
seq2: B6Ng01-145D17.g_68_1118

seq1  GAATTCAAGAGACTTGAGAATGTGACTGTGGCTTTGACAAGAGGTTGTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGAGACTTGAGAATGTGACTGTGGCTTTGACAAGAGGTTGTAA  50

seq1  GAGGTAGACTCAAGAGACAAATTTACTATAGGTCAGAAGACGATCTATTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTAGACTCAAGAGACAAATTTACTATAGGTCAGAAGACGATCTATTG  100

seq1  AGGAGAGTATTAGAAGCCTGGAAAAGCTTGTTCTTCTACACTACGTGGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAGTATTAGAAGCCTGGAAAAGCTTGTTCTTCTACACTACGTGGGA  150

seq1  GCAATGTCACAAGACCCAACGGCTTACTCTTTTAATGCCCCCACCAGCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATGTCACAAGACCCAACGGCTTACTCTTTTAATGCCCCCACCAGCTT  200

seq1  TATCAATTTTTCATCTTTGGATGATGAAGAGGATACTGAAAATATAGACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAATTTTTCATCTTTGGATGATGAAGAGGATACTGAAAATATAGACT  250

seq1  CATGTTTTAATGAGAAGACCAACTTGATTAACAACTTGGGAACAACTTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTTTAATGAGAAGACCAACTTGATTAACAACTTGGGAACAACTTTC  300

seq1  TTTGGCAGAGTAGAATAGGAGAGTTTTCAGGGAAAGACTTCCTTGAGAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGCAGAGTAGAATAGGAGAGTTTTCAGGGAAAGACTTCCTTGAGAAA  350

seq1  AGCCAAACTTCAACAAGGCTGTGTCACACCATTGAAGGCAGTTGACAACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAAACTTCAACAAGGCTGTGTCACACCATTGAAGGCAGTTGACAACA  400

seq1  CTTACTACAAAGAGACAGAAAAGGAAAATCTTCAGGAACAATCTATCCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACTACAAAGAGACAGAAAAGGAAAATCTTCAGGAACAATCTATCCCA  450

seq1  TGAAATGATTGTTCTTCCCTGAACGCTAAGAGAGCTATATCAGGAAATAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATGATTGTTCTTCCCTGAACGCTAAGAGAGCTATATCAGGAAATAT  500

seq1  TCCTGTCCAGCTGCAGAGAAGATCTGTTAGACTCTCTACTCAGAAGGAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTCCAGCTGCAGAGAAGATCTGTTAGACTCTCTACTCAGAAGGAGC  550

seq1  AGAAGGAGAAAAACCATGTTGTCTCTGTTGAAATGAAAAACAAGAGATGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGAGAAAAACCATGTTGTCTCTGTTGAAATGAAAAACAAGAGATGC  600

seq1  ACTGCTCCCTAGCTGACTGTCCCCCCAACAAAAGAATGAAAGTTTCTCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTCCCTAGCTGACTGTCCCCCCAACAAAAGAATGAAAGTTTCTCAT  650

seq1  AAAAAGAAACCAGAGGAAGAGGAAGAAGGCAGTGCTTCAGCTACTACAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGAAACCAGAGGAAGAGGAAGAAGGCAGTGCTTCAGCTACTACAAG  700

seq1  AAAGGATGAAAGAGAAACCCTGGAGAAAGCCAAGGGCAAACACACTGTGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGATGAAAGAGAAACCCTGGAGAAAGCCAAGGGCAAACACACTGTGC  750

seq1  CTGGTGGGCCACCTGCAATGGAGAAGGTTCTTAAGAGAACTGATGAGCAA  800
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  CTGGTGGGCCACCTGCAATGGAG-AGGTTCTTAAGAGAACTGATGAGCAA  799

seq1  GAGATAGAGAAAAGGCTGAGAATGCAGCAGGAAGTGGTGGAGATGCGGAG  850
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GAGATAGAGAAAAGGCTGAGAATGCAGCA-GAAGTGGTGGAGATGCGGAG  848

seq1  GAAGAACGAAGAGTTTAAGAAGATCACTCTCACAGGGCCAGGGCAACCTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAACGAAGAGTTTAAGAAGATCACTCTCACAGGGCCAGGGCAACCTG  898

seq1  TGAAGAAATCCACGAGCTAGGTTACCAAAACAGGTGACTTTCACTTCCTC  950
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TGAAGAAATCCACGAGCTAGG-TACCAAAACAGGTGACTTTCACTTCCTC  947

seq1  ACAGATGAGCAAATCAAACAACAGTGCAAGAACCAGGAAGAGTATAAGGA  1000
      | |||||||| |||| ||||||||||| || |||||| ||||||| ||||
seq2  A-AGATGAGC-AATC-AACAACAGTGC-AGGACCAGG-AGAGTAT-AGGA  991

seq1  AGTGAACCTCATGTCTGAACTTTGAAACCATTCTTCCACTCCTGCCTGAG  1050
      |||||  |||||||||| ||||||||||   ||||||||| ||||  |||
seq2  AGTGA--CTCATGTCTG-ACTTTGAAAC--ATCTTCCACT-CTGCTGGAG  1035

seq1  GGACCAGAGGATGTACT  1067
      |||| || |||||||||
seq2  GGACAAG-GGATGTACT  1051