BAC Information

Click to search

BAC

Clone NameB6Ng01-145E16
Chromosome4 (Build37)
Map Location 50,774,927 - 50,775,948
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666663
Downstream geneLOC100040979, LOC666681, LOC100040814
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-145E16.bB6Ng01-145E16.g
ACCDH942735DH942736
length1,2251,016
definitionDH942735|Mus musculus domesticus DNA, BAC clone: B6Ng01-145E16, 5' end.DH942736|Mus musculus domesticus DNA, BAC clone: B6Ng01-145E16, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgacagcccccaggctcagagttgagtcccccacatacttggcc
taactgggatcccccaggatccaggtgatgtgggaaatcctgcctatata
gagacacacattccctctagttttcatctgtgccttgtagtggatcctgt
tttccatgcctttctactccacccatacccagacacagcttgacccccag
tactactgatacagtcaggcaagggaagacccaacccttgccccaacacc
tgtcctaatggggatacctagtgcccagagtacacaactatgcctgtctc
agcactgtgctccagcttccatccacaccctattcacactcagagacagc
ggacaccaaggatttctgacacagccaggctcacagatcatgttctccat
accccctcatatacccaggggcaacttgtcaaaaggaaacccaacataac
catgctcacaggagggacagactctagtcagagatagcaagaccagttaa
taccagagataaccaaatggccagaggcaagaacaagaacataagcaaca
gaaacaagtttacttgacatcaccagaacccagttctcccaccatagcaa
gtcctggataccccaacatacctgaaaagtaagggataaggaactggtag
tagccactagaaagtcccagatgataggaagtgagaggttcccaggaccc
agtatggatgacattagctgaaatactcaacaatcagagataacctgtag
atactacctccagataggcccagtgcctagttgagtgatggggataccca
cccatctcaaaatttttaacccagaattgttcctgtctaaaggaaatgca
ggagaaaaaatggggcagagactgaaggagaagctatccagagaccaccc
catctgctacattcactccagtagtgacacacatgacagaccccaaaacc
tggatgcagtcctgaggcaaaagtcacggaaactagtctctggaaatttg
catctatagtagaatgcccaggttgtcctgtgataatgtggagggtcttg
catgctttttacaggtatttactggatagaagtagaaatctcaggacagc
tactctcaatcaggattacatatgtagcgagaggaaggtgtggcttagag
gaactgagtaatctggaccttagtagctggtttccccatacaggaaattt
acatgaccttgggggaagggggcta
gaattctgaggccgtatagatatggctgttcaaacacattttcctgcttt
ggaaaacatttgtactgtgaccacatgcactgatgctataaatttggatt
aaagtagaggtcttgtgtgtttacttctgctttttttcatacccagaaga
cttatttcctcttcaagaaagtcctgttgaaataaacctcatggtttaaa
aaatgtcagaaatcatagtcttacctatcacaaaatggtgattaggaaga
atggaatatcctggttttgtttttgttcaccttttcatttcctgcctttc
ccagtctgcctctctttctctccctgtacatatatttcatttaagtaatt
gtaaaaaaatttcttttaactggacatattttagcaagttttgtttgtgt
aatactcaacagaattttatttggtgggcaacactctgaaatcaattgag
aaagactcatgaatgttaaaaaaattatctaaatttccaaaataaatttc
aaaattcactcatttggcttacatattattttttgaataatgaatagtga
atgaaaaacatgaagagtagtttagtctttaaaatgtctgtttaattgaa
aataagtaaatttcttttcattataagggatctgaaatctctatgagaga
gagagagagagagagagagagagagagagagagagagaaagagagagaga
tagattatattattatattttagagacatgctatgctgtctatgtacatg
aaccaaaatgtgcatgagtgtggtttcatgggtttggggctatattgtta
aaagttacggacttttttttttacaacaacttaagacaaacaatgaaaga
ttattatggaagcaatcttcaatttccttgtaacctgctaatgctctggt
cacaatgaaactatcgtcagacacaatacaatctatttttaactttcttc
ccagaaagacgaaagaagcaatatgtgaagaaatgcctttcatgtcaaag
aagaatcatgctcagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_50774927_50775948
seq2: B6Ng01-145E16.g_67_1082 (reverse)

seq1  ACTGAGCATGATCTCTCCTTTGACAATGAAAAGGATTTC-TCACATATTG  49
      |||||||||||| ||| ||||||| |||||| | ||||| ||||||||||
seq2  ACTGAGCATGAT-TCTTCTTTGAC-ATGAAAGGCATTTCTTCACATATTG  48

seq1  CTTCTTTCCTTCTTTCTGGGGAGAAAACTTAAAATAGATTGTATTTGTGT  99
      ||||||| | |||||||||| |||||  | ||||||||||||| ||||||
seq2  CTTCTTT-CGTCTTTCTGGGAAGAAAGTTAAAAATAGATTGTA-TTGTGT  96

seq1  CTGGAAGATGGTTTTCATTGT-AACAGAGCATTAGCAGGATTAAAAGAAA  148
      || || ||| | ||||||||| | ||||||||||||||| |  || ||||
seq2  CT-GACGATAG-TTTCATTGTGACCAGAGCATTAGCAGGTTACAAGGAAA  144

seq1  TTGAAGATTTGCTTCCATAATAATTCTTTCATTGTTTGTCATAAGTTGTT  198
      ||||||| ||||||||||||||| |||||||||||||||| |||||||||
seq2  TTGAAGA-TTGCTTCCATAATAA-TCTTTCATTGTTTGTCTTAAGTTGTT  192

seq1  GTTAAAAAAAAAGTATGTAACTTTGAAAAATATTAGCCCAAAACCAGGAA  248
      || |||||||||||  |||||||| || |||||   |||||| ||| |||
seq2  GTAAAAAAAAAAGTCCGTAACTTTTAACAATATAGCCCCAAACCCATGAA  242

seq1  ACCAAACTCATGCACATTTTGGTTCATGTACATAGACAGCATAGTATGTC  298
      |||| ||||||||||||||||||||||||||||||||||||||| |||||
seq2  ACCACACTCATGCACATTTTGGTTCATGTACATAGACAGCATAGCATGTC  292

seq1  TCTAAAATATAATAATATAATCTATCTCTCTCTCTTTCTCTCTCTCTCTC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAAATATAATAATATAATCTATCTCTCTCTCTTTCTCTCTCTCTCTC  342

seq1  TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCATAGAGATTTCAGATCCCTT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCATAGAGATTTCAGATCCCTT  392

seq1  ATAATGAAAAGAAATTTACTTATTTTCAATTAAACAGACATTTTAAAGAC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGAAAAGAAATTTACTTATTTTCAATTAAACAGACATTTTAAAGAC  442

seq1  TAAACTACTCTTCATGTTTTTCATTCACTATTCATTATTCAAAAAATAAT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTACTCTTCATGTTTTTCATTCACTATTCATTATTCAAAAAATAAT  492

seq1  ATGTAAGCCAAATGAGTGAATTTTGAAATTTATTTTGGAAATTTAGATAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAAGCCAAATGAGTGAATTTTGAAATTTATTTTGGAAATTTAGATAA  542

seq1  TTTTTTTAACATTCATGAGTCTTTCTCAATTGATTTCAGAGTGTTGCCCA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTAACATTCATGAGTCTTTCTCAATTGATTTCAGAGTGTTGCCCA  592

seq1  CCAAATAAAATTCTGTTGAGTATTACACAAACAAAACTTGCTAAAATATG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATAAAATTCTGTTGAGTATTACACAAACAAAACTTGCTAAAATATG  642

seq1  TCCAGTTAAAAGAAATTTTTTTACAATTACTTAAATGAAATATATGTACA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTTAAAAGAAATTTTTTTACAATTACTTAAATGAAATATATGTACA  692

seq1  GGGAGAGAAAGAGAGGCAGACTGGGAAAGGCAGGAAATGAAAAGGTGAAC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGAGAAAGAGAGGCAGACTGGGAAAGGCAGGAAATGAAAAGGTGAAC  742

seq1  AAAAACAAAACCAGGATATTCCATTCTTCCTAATCACCATTTTGTGATAG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACAAAACCAGGATATTCCATTCTTCCTAATCACCATTTTGTGATAG  792

seq1  GTAAGACTATGATTTCTGACATTTTTTAAACCATGAGGTTTATTTCAACA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGACTATGATTTCTGACATTTTTTAAACCATGAGGTTTATTTCAACA  842

seq1  GGACTTTCTTGAAGAGGAAATAAGTCTTCTGGGTATGAAAAAAAGCAGAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTTTCTTGAAGAGGAAATAAGTCTTCTGGGTATGAAAAAAAGCAGAA  892

seq1  GTAAACACACAAGACCTCTACTTTAATCCAAATTTATAGCATCAGTGCAT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAACACACAAGACCTCTACTTTAATCCAAATTTATAGCATCAGTGCAT  942

seq1  GTGGTCACAGTACAAATGTTTTCCAAAGCAGGAAAATGTGTTTGAACAGC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTCACAGTACAAATGTTTTCCAAAGCAGGAAAATGTGTTTGAACAGC  992

seq1  CATATCTATACGGCCTCAGAATTC  1022
      ||||||||||||||||||||||||
seq2  CATATCTATACGGCCTCAGAATTC  1016