BAC Information

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BAC

Clone NameB6Ng01-145M16
Chromosome4 (Build37)
Map Location 24,692,621 - 24,693,695
singlet/doubletsinglet
Overlap geneKlhl32
Upstream geneLOC623873, LOC664973, F730047E07Rik
Downstream gene1110007M04Rik, C230012O17Rik, Gpr63, Fhl5, 1810074P20Rik, Prdx6-rs2, LOC665019, LOC625732, Fut9
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-145M16.bB6Ng01-145M16.g
ACCDH943102DH943103
length1,2291,071
definitionDH943102|Mus musculus domesticus DNA, BAC clone: B6Ng01-145M16, 5' end.DH943103|Mus musculus domesticus DNA, BAC clone: B6Ng01-145M16, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagtcagtaaagtgcttttccatgtgagtacaaggacttgagttt
gagcccagagcacacattaaaagattggtgtgagggtgtgtgcaaggaag
atggagacacatagttccctgacgctttctgacagtcagcttgtcctact
gagcaaggcccagactatatagatatctagactcaaaaagtcagggagag
gacacctgaggaatgacattctaggttgaccagctggccggaacacacac
acaccatttccacccatacaagaaatagtaactctctctatcaacccatg
cattctgatgtacatggcaacagtcaaccttgtatgtaaatcctttcatc
agtttgctgtctttggagaagtgagcagagttccttttggttgggtgact
ttgtttcttcaagattcaatcttttccaaatgttatactttctcacacaa
ccaagtaatattcctgtccataaagactgtactctgtttcttttccactc
agggattgtgtctcaagatctatacagttgcatacatacacacacacaca
cacaaacatatatatatatatatacatatatatatatatatacatatatc
ccatcctgattaaattcttgtcaccagatcagatttgagggctagtcatg
attatccatttgacacacataataagaaggaacctcaattgaagacttgc
ctttaattctgtaaggaattgtcttgagtactgattgatgaaagtgagcc
aaagccactctgggagatataatccctaggcacatatcctgggctgaata
agaaagagagctgcaatagtcacaaataatataaaataccttggcgtgac
tctaactaagggaagtgaaagatctgtatgataagaacttcagtctctaa
agaagaaattaaagaagatctcagaagatggaaagatctcccatgctcat
ggattggcagatcaacattgtaaaatggctatctgccaaagcaatcttac
agatcatgcaatcccatcaaattccacctcattcttcacgatagaagggc
tatcagcggattcatcttggattacaaaacgaggaaggcaaaactccttc
tcaggataaaggacctctggtgattcacatgcttgcctagcgtattcaag
cattgtatcactgtgcgtactgttaggacacagggtacatggacgagtga
gacccgagttgattcactcacacctaggc
gaattccaaaagaatcctatttttaatgaatgtccacggtctagggaaat
tatgaagctattatctttcaaaataaactcataacacccctgggagttct
agctgcttccatccaaaattaaccttcccacgacattcccactgtatgct
gcatccacagcagcagatgtgaagctgctaattgctagccagacaattag
tgcttatctgatgcccatcaaatgtgagacttggtaacaggctggctaga
taatgtcacatgattgcttcatttggctttgctgaatgtcaaggccataa
gtaggaagattggctggcgtggaaagaaactaagaaaggaggtagagata
aatgtgatcagaaggcattatatacaagcatgaaattattagacaatcaa
ttttgtacagctaaatgttggatttttcttttgactggttttccacttat
acacataatatatgaatatagttttctataataattaggtttaaataaaa
ttaaaatcctacttcctgaaaaggcaatatttgaacaaacagcaaaagaa
caagctttgtaggaggagataattccaggagaggatgactgtgcacagga
cccaggtggggtgtgccaggcaaggatggcaggtaatgaggcctagggtg
gtgggcacggtaggagggaacagctttccttctgcagcagagtagacagc
agcatagtgtgttgagaaggtgtgaaagtctgaggtgcattttcaaccag
gatcactggggctgtaactctgcaacagcctctgtgggactgaagagtga
aataaaaaagagggtctaacagagttctttacaactccacgcaaaagatg
gtggtagcttagatcaggtgacagtagcaaaagtgattgagacttgtcca
tatattatttaaggcagacctgggagacttgttagcagtcaagataacac
agacatttggaccctgtgttgattataaagatataactggggaaacctgc
acaataactagccttgtgagctgatgagactttaataaaggatactagct
ttatattggctcccaaacatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_24692621_24693695
seq2: B6Ng01-145M16.g_69_1139

seq1  GAATTCCAAAAGAATCCTATTTTTAATGAATGTCCACGGTCTAGGGAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAAAGAATCCTATTTTTAATGAATGTCCACGGTCTAGGGAAAT  50

seq1  TATGAAGCTATTATCTTTCAAAATAAACTCATAACACCCCTGGGAGTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAAGCTATTATCTTTCAAAATAAACTCATAACACCCCTGGGAGTTCT  100

seq1  AGCTGCTTCCATCCAAAATTAACCTTCCCACGACATTCCCACTGTATGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGCTTCCATCCAAAATTAACCTTCCCACGACATTCCCACTGTATGCT  150

seq1  GCATCCACAGCAGCAGATGTGAAGCTGCTAATTGCTAGCCAGACAATTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCCACAGCAGCAGATGTGAAGCTGCTAATTGCTAGCCAGACAATTAG  200

seq1  TGCTTATCTGATGCCCATCAAATGTGAGACTTGGTAACAGGCTGGCTAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTATCTGATGCCCATCAAATGTGAGACTTGGTAACAGGCTGGCTAGA  250

seq1  TAATGTCACATGATTGCTTCATTTGGCTTTGCTGAATGTCAAGGCCATAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTCACATGATTGCTTCATTTGGCTTTGCTGAATGTCAAGGCCATAA  300

seq1  GTAGGAAGATTGGCTGGCGTGGAAAGAAACTAAGAAAGGAGGTAGAGATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGAAGATTGGCTGGCGTGGAAAGAAACTAAGAAAGGAGGTAGAGATA  350

seq1  AATGTGATCAGAAGGCATTATATACAAGCATGAAATTATTAGACAATCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGATCAGAAGGCATTATATACAAGCATGAAATTATTAGACAATCAA  400

seq1  TTTTGTACAGCTAAATGTTGGATTTTTCTTTTGACTGGTTTTCCACTTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTACAGCTAAATGTTGGATTTTTCTTTTGACTGGTTTTCCACTTAT  450

seq1  ACACATAATATATGAATATAGTTTTCTATAATAATTAGGTTTAAATAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATAATATATGAATATAGTTTTCTATAATAATTAGGTTTAAATAAAA  500

seq1  TTAAAATCCTACTTCCTGAAAAGGCAATATTTGAACAAACAGCAAAAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATCCTACTTCCTGAAAAGGCAATATTTGAACAAACAGCAAAAGAA  550

seq1  CAAGCTTTGTAGGAGGAGATAATTCCAGGAGAGGATGACTGTGCACAGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCTTTGTAGGAGGAGATAATTCCAGGAGAGGATGACTGTGCACAGGA  600

seq1  CCCAGGTGGGGTGTGCCAGGCAAGGATGGCAGGTAATGAGGCCTAGGGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGTGGGGTGTGCCAGGCAAGGATGGCAGGTAATGAGGCCTAGGGTG  650

seq1  GTGGGCACGGTAGGAGGGAACAGCTTTCCTTCTGCAGCAGAGTAGACAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGCACGGTAGGAGGGAACAGCTTTCCTTCTGCAGCAGAGTAGACAGC  700

seq1  AGCATAGTGTGTTGAGAAGGTGTGAAAGTCTGAGGTGCATTTTCAACCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATAGTGTGTTGAGAAGGTGTGAAAGTCTGAGGTGCATTTTCAACCAG  750

seq1  GATCACTGGGGCTGTAACTCTGCAACAGCCTCTGTGGGACTGAAGAGTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCACTGGGGCTGTAACTCTGCAACAGCCTCTGTGGGACTGAAGAGTGA  800

seq1  AATAAAAAAGAGGGTCTAACAGAGTTCTTTACAACTCCACGCAAAAGATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAAAAGAGGGTCTAACAGAGTTCTTTACAACTCCACGCAAAAGATG  850

seq1  GTGGTAGCTTAGATCAGGGTGACAGTAGCAAAAGTGATTGAGACTTGTCC  900
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GTGGTAGCTTAGATCA-GGTGACAGTAGCAAAAGTGATTGAGACTTGTCC  899

seq1  ATATA-TATTTAAGGCAGACCTGGGAGACTTGTTAGCAGTCAAGGATAAC  949
      ||||| ||||||||||||||||||||||||||||||||||||| ||||||
seq2  ATATATTATTTAAGGCAGACCTGGGAGACTTGTTAGCAGTCAA-GATAAC  948

seq1  ACAGACATTTGGACCCTGTGTTGATTATAAAGATAT-ACTGGGGAAACCT  998
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  ACAGACATTTGGACCCTGTGTTGATTATAAAGATATAACTGGGGAAACCT  998

seq1  GCACAATAACTAGCTTTGTGAGCTGAATTGAGACTTTAATAATAGATAAC  1048
      |||||||||||||| |||||||||||  ||||||||||||||  ||||  
seq2  GCACAATAACTAGCCTTGTGAGCTGA--TGAGACTTTAATAAAGGATA--  1044

seq1  CTAGCTTTATATTGCTTCCAAAACATT  1075
      ||||||||||||||  ||| |||||||
seq2  CTAGCTTTATATTGGCTCCCAAACATT  1071