BAC Information

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BAC

Clone NameB6Ng01-145M18
Chromosome4 (Build37)
Map Location 93,700,225 - 93,840,917
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC620269, LOC384125, Tusc1
Downstream gene5830433M19Rik, Plaa, LOC667250, Lrrc19, Ift74, Tek, 4930579C15Rik, LOC100039252, Mysm1, LOC100039265, LOC665029, Jun
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-145M18.bB6Ng01-145M18.g
ACCDH943106DH943107
length1,091948
definitionDH943106|Mus musculus domesticus DNA, BAC clone: B6Ng01-145M18, 5' end.DH943107|Mus musculus domesticus DNA, BAC clone: B6Ng01-145M18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(93,839,810 - 93,840,917)(93,700,225 - 93,701,161)
sequence
gaattcttccactcactcatatttgtgtttctggtccccacacttgagcc
tctgagttcctgaggaaacctgctgcctccaaggaaggttatctgtatct
cagactccacctcacctctagcacatggacagtgtcagatgatttccagg
ttctctctccatcattctatcctgtgtttgggctgggattgggtcttagt
gtatagagcccagaaacagactcactctgtatagagaggagtagaaatca
cagctcagtaacctctgacatgtcacatatcctaaaggatttttctattg
aaaatgtttttcatatacaatatattttgattacagtttccctttcctct
acatcttcccattcccccctttcttccctcccatccagatctactcccat
tctgtttctccttagaaaacaaacagacatctaagggataataataaaat
taaataaaaatacaaaacaaatctaagcaactcagaataggactaaacaa
acaaacaaacaaacaaacaaacaaacggataaggcacaagaaacatacag
atgcaaagaaacactcattcgcatcatcaatatcctcaggtttgaacaga
catgttgaaaaacaaatcatagaaatggatctattgaaatttggtgctag
gctgggtagtggtggtacatgcctttaattccaggacttgggagggagag
gcaggtggatttctgtaagttcaaggccaacctggcctacagagcaagtt
tcaagacagtcaaggctacacagagaaaccctgtctggaaaaaacaaacc
aaacaaagttgatgctgtatatgtttgctccatttggtttctgcattata
tgagtccctagctctgcccctggctagtttatgagattcggaaaagtgtt
gagtaaagcatttaatttactatgactcgtacttagtcatgtatggatgc
tatttcccactagctgtgggtctatgcagctgtagcttgatgagtgctct
cacttttctgcttcaagtgtgtcaggagagcactgtcaaatctttctgaa
atctggattcccatttcttctattctctgctctccagggtg
ggttaaatttagatttctaagtaaagcccaatctaagaatattctctggc
tttaggcccacagcatgtttatttgattgtaaattggacatatttccatt
cactttagaattttgcctctcaatgcattgtttccttaagagactccaca
agttctgattaacatgtgggaactggtatctactttctgacttctggtag
cagctataccatttccagtaaggtaccagtgcctctgcaatttaccctga
gattttctatgaataattcctactaggaaggttaacatttcttttttaat
gaattaatctcactgaaccatcttttgcacatagacaaatgcacccattt
tcaattcagtcaaatatcactgtaatcagactacagagcatctctatgcc
tgacaacattctctacgtgcacatatcatgaatcctcttttattattatt
aattattttatttgtttatatttcaaatgttgtcccccttcctggtccag
gccatggttccacaggactaagagcctcctctcccattgatgccagataa
agcaatcctctgctacatatgtagctgaaaccatggacccatccaggtat
actctggttggtggtttagtccctgggaacagtaagaggtccagttagtt
gatactgtaattactatgaggttacaatcccctgactcttccactggggt
cccaaggttcagtccaatgtttggctgtgagtatctgcatctgccttagt
taggtggtggcagaggatctcttcggacaaccataccaggctcctgtcag
caagcacatcttggcatcatcaatagtgtcggatttggtgtctgtggaaa
gggatggatcccatggtgggaacagtctctgggtggcctttctttagtct
gtgcccattttgtcctgtgtatcctttagacagaaacatctggtaaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_93839810_93840917
seq2: B6Ng01-145M18.b_47_1137 (reverse)

seq1  CACCCTGGGAGAGCAGAGGAATAGGAGAGAAATGGGGAATCCAGATTTCA  50
      |||||| |||||||||| ||||||   |||||| ||||||||||||||| 
seq2  CACCCT-GGAGAGCAGA-GAATAG--AAGAAAT-GGGAATCCAGATTTC-  44

seq1  AGAAAGATTTGACAAGTGCTCTCCTGACACACTTGAAGGCAAGAAAGTGG  100
      ||||||||||||| ||||||||||||||||||||||| |||  |||||| 
seq2  AGAAAGATTTGAC-AGTGCTCTCCTGACACACTTGAA-GCAGAAAAGTG-  91

seq1  AAGAGCACCTTCATCAAGCTACAGCTGCATAGACCCACAGCTAGTGGGAA  150
       |||||||  ||||||||||||||||||||||||||||||||||||||||
seq2  -AGAGCAC--TCATCAAGCTACAGCTGCATAGACCCACAGCTAGTGGGAA  138

seq1  ATAAGCATCCATACATGACTAAGTAACGAGTCATAGTAAATTAAATGCTT  200
      || ||||||||||||||||||||| |||||||||||||||||||||||||
seq2  AT-AGCATCCATACATGACTAAGT-ACGAGTCATAGTAAATTAAATGCTT  186

seq1  TAACTCAACACTTTTTCCGAATCTCATAAACTAGCCAGGGGCAGAGCTAG  250
      | ||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  T-ACTCAACAC-TTTTCCGAATCTCATAAACTAGCCAGGGGCAGAGCTAG  234

seq1  GGACTCATATAATGCAGAAACCAAATGGAGCAAACATATACAGCATCAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTCATATAATGCAGAAACCAAATGGAGCAAACATATACAGCATCAAC  284

seq1  TTTTGTTTGGTTTGTTTTTTCCAGACAGGGTTTCTCTGTGTAGCCTTGAC  350
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -TTTGTTTGGTTTGTTTTTTCCAGACAGGGTTTCTCTGTGTAGCCTTGAC  333

seq1  TGTCTTGAAACTTGCTCTGTAGGCCAGGTTGGCCTTGAACTTACAGAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTGAAACTTGCTCTGTAGGCCAGGTTGGCCTTGAACTTACAGAAAT  383

seq1  CCACCTGCCTCTCCCTCCCAAGTCCTGGAATTAAAGGCATGTACCACCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCTGCCTCTCCCTCCCAAGTCCTGGAATTAAAGGCATGTACCACCAC  433

seq1  TACCCAGCCTAGCACCAAATTTCAATAGATCCATTTCTATGATTTGTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCAGCCTAGCACCAAATTTCAATAGATCCATTTCTATGATTTGTTTT  483

seq1  TCAACATGTCTGTTCAAACCTGAGGATATTGATGATGCGAATGAGTGTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACATGTCTGTTCAAACCTGAGGATATTGATGATGCGAATGAGTGTTT  533

seq1  CTTTGCATCTGTATGTTTCTTGTGCCTTATCCGTTTGTTTGTTTGTTTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGCATCTGTATGTTTCTTGTGCCTTATCCGTTTGTTTGTTTGTTTGT  583

seq1  TTGTTTGTTTGTTTAGTCCTATTCTGAGTTGCTTAGATTTGTTTTGTATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTGTTTGTTTAGTCCTATTCTGAGTTGCTTAGATTTGTTTTGTATT  633

seq1  TTTATTTAATTTTATTATTATCCCTTAGATGTCTGTTTGTTTTCTAAGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTAATTTTATTATTATCCCTTAGATGTCTGTTTGTTTTCTAAGGA  683

seq1  GAAACAGAATGGGAGTAGATCTGGATGGGAGGGAAGAAAGGGGGGAATGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACAGAATGGGAGTAGATCTGGATGGGAGGGAAGAAAGGGGGGAATGG  733

seq1  GAAGATGTAGAGGAAAGGGAAACTGTAATCAAAATATATTGTATATGAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATGTAGAGGAAAGGGAAACTGTAATCAAAATATATTGTATATGAAA  783

seq1  AACATTTTCAATAGAAAAATCCTTTAGGATATGTGACATGTCAGAGGTTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTTTCAATAGAAAAATCCTTTAGGATATGTGACATGTCAGAGGTTA  833

seq1  CTGAGCTGTGATTTCTACTCCTCTCTATACAGAGTGAGTCTGTTTCTGGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCTGTGATTTCTACTCCTCTCTATACAGAGTGAGTCTGTTTCTGGG  883

seq1  CTCTATACACTAAGACCCAATCCCAGCCCAAACACAGGATAGAATGATGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATACACTAAGACCCAATCCCAGCCCAAACACAGGATAGAATGATGG  933

seq1  AGAGAGAACCTGGAAATCATCTGACACTGTCCATGTGCTAGAGGTGAGGT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAACCTGGAAATCATCTGACACTGTCCATGTGCTAGAGGTGAGGT  983

seq1  GGAGTCTGAGATACAGATAACCTTCCTTGGAGGCAGCAGGTTTCCTCAGG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTCTGAGATACAGATAACCTTCCTTGGAGGCAGCAGGTTTCCTCAGG  1033

seq1  AACTCAGAGGCTCAAGTGTGGGGACCAGAAACACAAATATGAGTGAGTGG  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCAGAGGCTCAAGTGTGGGGACCAGAAACACAAATATGAGTGAGTGG  1083

seq1  AAGAATTC  1108
      ||||||||
seq2  AAGAATTC  1091

seq1: chr4_93700225_93701161
seq2: B6Ng01-145M18.g_78_1010

seq1  GGTTAAATTTAGATTTCTAAGTAAAGCCCAATCTAAGAATATTCTCTGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAAATTTAGATTTCTAAGTAAAGCCCAATCTAAGAATATTCTCTGGC  50

seq1  TTTAGGCCCACAGCATGTTTATTTGATTGTAAATTGGACATATTTCCATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGGCCCACAGCATGTTTATTTGATTGTAAATTGGACATATTTCCATT  100

seq1  CACTTTAGAATTTTGCCTCTCAATGCATTGTTTCCTTAAGAGACTCCACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTAGAATTTTGCCTCTCAATGCATTGTTTCCTTAAGAGACTCCACA  150

seq1  AGTTCTGATTAACATGTGGGAACTGGTATCTACTTTCTGACTTCTGGTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTGATTAACATGTGGGAACTGGTATCTACTTTCTGACTTCTGGTAG  200

seq1  CAGCTATACCATTTCCAGTAAGGTACCAGTGCCTCTGCAATTTACCCTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTATACCATTTCCAGTAAGGTACCAGTGCCTCTGCAATTTACCCTGA  250

seq1  GATTTTCTATGAATAATTCCTACTAGGAAGGTTAACATTTCTTTTTTAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTCTATGAATAATTCCTACTAGGAAGGTTAACATTTCTTTTTTAAT  300

seq1  GAATTAATCTCACTGAACCATCTTTTGCACATAGACAAATGCACCCATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTAATCTCACTGAACCATCTTTTGCACATAGACAAATGCACCCATTT  350

seq1  TCAATTCAGTCAAATATCACTGTAATCAGACTACAGAGCATCTCTATGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTCAGTCAAATATCACTGTAATCAGACTACAGAGCATCTCTATGCC  400

seq1  TGACAACATTCTCTACGTGCACATATCATGAATCCTCTTTTATTATTATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAACATTCTCTACGTGCACATATCATGAATCCTCTTTTATTATTATT  450

seq1  AATTATTTTATTTGTTTATATTTCAAATGTTGTCCCCCTTCCTGGTCCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATTTTATTTGTTTATATTTCAAATGTTGTCCCCCTTCCTGGTCCAG  500

seq1  GCCATGGTTCCACAGGACTAAGAGCCTCCTCTCCCATTGATGCCAGATAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATGGTTCCACAGGACTAAGAGCCTCCTCTCCCATTGATGCCAGATAA  550

seq1  AGCAATCCTCTGCTACATATGTAGCTGAAACCATGGACCCATCCAGGTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATCCTCTGCTACATATGTAGCTGAAACCATGGACCCATCCAGGTAT  600

seq1  ACTCTGGTTGGTGGTTTAGTCCCTGGGAACAGTAAGAGGTCCAGTTAGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGGTTGGTGGTTTAGTCCCTGGGAACAGTAAGAGGTCCAGTTAGTT  650

seq1  GATACTGTAATTACTATGAGGTTACAATCCCCTGACTCTTCCACTGGGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACTGTAATTACTATGAGGTTACAATCCCCTGACTCTTCCACTGGGGT  700

seq1  CCCAAGGTTCAGTCCAATGTTTGGCTGTGAGTATCTGCATCTGCCTTAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAGGTTCAGTCCAATGTTTGGCTGTGAGTATCTGCATCTGCCTTAGT  750

seq1  TAGGTGGTGGCAGAGGATCTCTTCGGACAACCATACCAGGCTCCTGTCAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTGGTGGCAGAGGATCTCTTCGGACAACCATACCAGGCTCCTGTCAG  800

seq1  CAAGCACATCTTGGCATCATCAATAGTGTCGGGATTTGGTGTCTGTGG-A  849
      |||||||||||||||||||||||||||||| ||||||||||||||||| |
seq2  CAAGCACATCTTGGCATCATCAATAGTGTC-GGATTTGGTGTCTGTGGAA  849

seq1  AGGGATGGATCCCATGGTGGGAACAGTCTCTGGGTGGCCTTTCTTTAAGT  899
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AGGGATGGATCCCATGGTGGGAACAGTCTCTGGGTGGCCTTTCTTT-AGT  898

seq1  CTGTGCCCCATTTTTGTCCCTGTGTATCCTTTAGACAG  937
      ||||||||   |||||| ||||||||||||||||||||
seq2  CTGTGCCC--ATTTTGT-CCTGTGTATCCTTTAGACAG  933