BAC Information

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BAC

Clone NameB6Ng01-146D19
Chromosome4 (Build37)
Map Location 85,834,398 - 85,986,233
singlet/doubletdoublet
Overlap geneAdamtsl1
Upstream geneSh3gl2, A930009N24, LOC668052
Downstream gene4930500O09Rik, Rraga, 6230416J20Rik, LOC100040388, Adfp, EG624685, Dennd4c, Rps6, Asah3l, Slc24a2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-146D19.bB6Ng01-146D19.g
ACCDH943434DH943435
length1,169243
definitionDH943434|Mus musculus domesticus DNA, BAC clone: B6Ng01-146D19, 5' end.DH943435|Mus musculus domesticus DNA, BAC clone: B6Ng01-146D19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(85,834,398 - 85,835,553)(85,985,991 - 85,986,233)
sequence
gaattctatctactttaaattctagcacagaatctttttcatctgtagag
tagaactgtaatcttacttcatatctgctgtggtcaaatctagagactaa
aaagcctttgcaaacttcactgtatgtccagagttatgagacaattaatc
tataagacatagatcactaaggaacaaaatgaccacacacccctcacaat
gtaattaatacatatagtttgacagttatgtggactatgagatggaagat
tttaaaacagaatcatctaaggagttctgaaatatatagttggaattttt
atgttccatgtacaatgtcctagatctttatataagttatgtcaagtaat
tcaagatccataaaataattattttctttttataattcatgagacactgg
atttcatgtgaacaatctgacaaattcaaatagatggcaataagtcagca
caacctagtggagtcgtgtgctgccccgtaatgtcatcctgtctctctca
tggtagaatgtgctaaagaacagagatttttttaggagtatatgatatac
agattcctggtgaaaataatgattccccaagttaaaaaataggcaatgca
gtgaattcactgatagcatgctgtgatacagtgttctggccttgtaataa
gcacaacatatctacagcaggaactctaaggatcatgatagaactgagat
tcacaataggcactgtttcttaggggtcagagtaaaagcctactctgttc
aataagaatagccttaccattccattaaaattcttttataagtatagctt
atttctttgggaaaactgacattagcaaccttgacttctcaagttgatct
aaaacaaagttgctgtcttatgcatgctttcgaggcatgtggacaaaggt
ttggagttattctactgatgcaattttgagataaactctgtatttgacca
aatttctttggattacttaatagagattcaataagcatggaaagaaatgg
catagagaaatgaatgatcttgtagtttggaatcatctaagttttgtcaa
ctgggggatgagttttgaaagttgttgaagaaacaaatacataattacct
ttgtccaagaagctggaaacggatataaaaagtaaatatctagggagagg
tgaccaagccctgaattga
agtgcaagtccactgtgggcttggggcaagcccaaggcagtttcactgat
gaggcgagtgtagtcgggagtgtgagagggacttgggacctgactttgga
gacctttcattttcagacaggtttggaattggtccacagagcaatgggaa
gccgtgaaggagggagtgacatgatggaagaggtgtatgagaaggtggat
ctggcaacactgtgctgaagggaggagaggggaggggagggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_85834398_85835553
seq2: B6Ng01-146D19.b_48_1216

seq1  GAATTCTATCTACTTTAAATTCTAGCACAGAATCTTTTTCATCTGTAGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATCTACTTTAAATTCTAGCACAGAATCTTTTTCATCTGTAGAG  50

seq1  TAGAACTGTAATCTTACTTCATATCTGCTGTGGTCAAATCTAGAGACTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAACTGTAATCTTACTTCATATCTGCTGTGGTCAAATCTAGAGACTAA  100

seq1  AAAGCCTTTGCAAACTTCACTGTATGTCCAGAGTTATGAGACAATTAATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCTTTGCAAACTTCACTGTATGTCCAGAGTTATGAGACAATTAATC  150

seq1  TATAAGACATAGATCACTAAGGAACAAAATGACCACACACCCCTCACAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGACATAGATCACTAAGGAACAAAATGACCACACACCCCTCACAAT  200

seq1  GTAATTAATACATATAGTTTGACAGTTATGTGGACTATGAGATGGAAGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTAATACATATAGTTTGACAGTTATGTGGACTATGAGATGGAAGAT  250

seq1  TTTAAAACAGAATCATCTAAGGAGTTCTGAAATATATAGTTGGAATTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAACAGAATCATCTAAGGAGTTCTGAAATATATAGTTGGAATTTTT  300

seq1  ATGTTCCATGTACAATGTCCTAGATCTTTATATAAGTTATGTCAAGTAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCCATGTACAATGTCCTAGATCTTTATATAAGTTATGTCAAGTAAT  350

seq1  TCAAGATCCATAAAATAATTATTTTCTTTTTATAATTCATGAGACACTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGATCCATAAAATAATTATTTTCTTTTTATAATTCATGAGACACTGG  400

seq1  ATTTCATGTGAACAATCTGACAAATTCAAATAGATGGCAATAAGTCAGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCATGTGAACAATCTGACAAATTCAAATAGATGGCAATAAGTCAGCA  450

seq1  CAACCTAGTGGAGTCGTGTGCTGCCCCGTAATGTCATCCTGTCTCTCTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCTAGTGGAGTCGTGTGCTGCCCCGTAATGTCATCCTGTCTCTCTCA  500

seq1  TGGTAGAATGTGCTAAAGAACAGAGATTTTTTTAGGAGTATATGATATAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAGAATGTGCTAAAGAACAGAGATTTTTTTAGGAGTATATGATATAC  550

seq1  AGATTCCTGGTGAAAATAATGATTCCCCAAGTTAAAAAATAGGCAATGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTCCTGGTGAAAATAATGATTCCCCAAGTTAAAAAATAGGCAATGCA  600

seq1  GTGAATTCACTGATAGCATGCTGTGATACAGTGTTCTGGCCTTGTAATAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATTCACTGATAGCATGCTGTGATACAGTGTTCTGGCCTTGTAATAA  650

seq1  GCACAACATATCTACAGCAGGAACTCTAAGGATCATGATAGAACTGAGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAACATATCTACAGCAGGAACTCTAAGGATCATGATAGAACTGAGAT  700

seq1  TCACAATAGGCACTGTTTCTTAGGGGTCAGAGTAAAAGCCTACTCTGTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAATAGGCACTGTTTCTTAGGGGTCAGAGTAAAAGCCTACTCTGTTC  750

seq1  AATAAGAATAGCCTTACCATTCCATTAAAATTC-TTTATAAGTATAGCTT  799
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  AATAAGAATAGCCTTACCATTCCATTAAAATTCTTTTATAAGTATAGCTT  800

seq1  ATTTCTTTGGGAAAACTGACATTAGCAACCTTGACTTCTCAAGTTGATCT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTTGGGAAAACTGACATTAGCAACCTTGACTTCTCAAGTTGATCT  850

seq1  AAAACAAAGTTGCTGTCTTATGCATGCTTTCGAGGCATGTGGACAAAGGT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAAAGTTGCTGTCTTATGCATGCTTTCGAGGCATGTGGACAAAGGT  900

seq1  TTGGAGTTATTCTACTGATGCAATTTTGAGATAAACTCTGTATTTGACCA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGTTATTCTACTGATGCAATTTTGAGATAAACTCTGTATTTGACCA  950

seq1  AATTTCTTTGGATTTACTTAATAGAGATTCAATAAGCATGGATAGAAATG  999
      |||||||||||| ||||||||||||||||||||||||||||| |||||||
seq2  AATTTCTTTGGA-TTACTTAATAGAGATTCAATAAGCATGGAAAGAAATG  999

seq1  GCAATAGAGAAATGAATGATC-TGTAG-TTGAAATCATCTAAG-TCTGTC  1046
      || |||||||||||||||||| ||||| ||| ||||||||||| | ||||
seq2  GC-ATAGAGAAATGAATGATCTTGTAGTTTGGAATCATCTAAGTTTTGTC  1048

seq1  AACT-GGGGATGAG-TTTGAAAGTTGTTGAAGAA--CAATACATA--TAA  1090
      |||| ||||||||| |||||||||||||||||||   ||||||||  || 
seq2  AACTGGGGGATGAGTTTTGAAAGTTGTTGAAGAAACAAATACATAATTAC  1098

seq1  CTTTGTCCAAGAAGCTTGAAACGG--ATAAAAAGT-AATATCTAGG--GA  1135
      |||||||||||||||| |||||||  ||||||||| ||||||||||  ||
seq2  CTTTGTCCAAGAAGCTGGAAACGGATATAAAAAGTAAATATCTAGGGAGA  1148

seq1  GGTGACCAAGCACAGAATTGA  1156
      ||||||||||| | |||||||
seq2  GGTGACCAAGCCCTGAATTGA  1169

seq1: chr4_85985991_85986233
seq2: B6Ng01-146D19.g_72_314 (reverse)

seq1  TCCCCTCCCCTCCCCTCTCCTCCCTTCAGCACAGTGTTGCCAGATCCACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTCCCCTCCCCTCTCCTCCCTTCAGCACAGTGTTGCCAGATCCACC  50

seq1  TTCTCATACACCTCTTCCATCATGTCACTCCCTCCTTCACGGCTTCCCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCATACACCTCTTCCATCATGTCACTCCCTCCTTCACGGCTTCCCAT  100

seq1  TGCTCTGTGGACCAATTCCAAACCTGTCTGAAAATGAAAGGTCTCCAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTGTGGACCAATTCCAAACCTGTCTGAAAATGAAAGGTCTCCAAAG  150

seq1  TCAGGTCCCAAGTCCCTCTCACACTCCCGACTACACTCGCCTCATCAGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGTCCCAAGTCCCTCTCACACTCCCGACTACACTCGCCTCATCAGTG  200

seq1  AAACTGCCTTGGGCTTGCCCCAAGCCCACAGTGGACTTGCACT  243
      |||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGCCTTGGGCTTGCCCCAAGCCCACAGTGGACTTGCACT  243