BAC Information

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BAC

Clone NameB6Ng01-146J23
Chromosome4 (Build37)
Map Location 104,270,935 - 104,378,885
singlet/doubletdoublet
Overlap geneDab1
Upstream geneEG665460, LOC622315
Downstream geneC8b, C8a, 1700024P16Rik, Prkaa2, LOC100039513, Ppap2b, LOC433742, LOC665518, LOC434381
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-146J23.bB6Ng01-146J23.g
ACCDH943714DH943715
length2181,069
definitionDH943714|Mus musculus domesticus DNA, BAC clone: B6Ng01-146J23, 5' end.DH943715|Mus musculus domesticus DNA, BAC clone: B6Ng01-146J23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(104,270,935 - 104,271,152)(104,377,822 - 104,378,885)
sequence
gaattcagtggtcagctgacccaacagagacttttccttgattggagttc
atggcctaataaggaggagagctgttaagcagattagtgcaaatgagatt
aatctactgcaaaagtgcataggaatgctgaagccatgctctagcttcat
catctactggatagctctctggagcagagaactcagggcctggggtgtta
gagggggagggtggaagg
gaattcatttcactacttggtcttccctcttagatttgcttttcacagta
tgaatctggcgacctccaaaatgccctgggtgtctactactagcctggca
ccaagaggcccttgaactgccctcccctccccccgccaagcccctgagct
agagcaagtgaggttagagaaaactggagatgactaactccagccactgt
aaggggagtgtcacaacaagggaaccatattgagcatttttacagagaat
gtgccatttccagtcatgatgccattcatagaacagaagccagcaccagc
cactggggatagccaaagaaagctttctgtcattctcagaacagaatctg
tccatttatcctctgacttctctgtggcaacattagggggatgctcatct
cctgaggtcatgttgaatatcaccttcctgtcttagcaatggtgttaacc
accgctgtgttgaaacaccacaaccaaaagcaagctggggacaaatcagc
acaggaactcatacagggtaggaaggcaggagatgatgcagaggccatgg
agagctgctgcttactggcttgctccttgtggcttgatcagcctactttc
ttatagaacccaggaccactagtctacagatggcaccacccccaaggggc
tgtgccctcccacatcaatcactaattaagaaaatgccttacaggcctgc
ctacaacccaatctcatggaagcattttcttaactggggcactctccctc
tcagatgattttagcttgtgttaagttgacataaagccatccagctcatt
tcccaagcttggtttttgctcatcttctggtttctacacagttgccaaca
catgtctaggacccaaatctgcaggtaaacaggtatgtattgagttaagt
tcctgctgttatggtaactagagtttgagaaagaccaaacttagaaagtg
cagagatggcatcatggcacgtgcctatgacccttagctagcattcagaa
ggttacaaacgtaatgtagctgaacttacaaactgaagaattgtctcacg
aaaaactatcttagataaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_104270935_104271152
seq2: B6Ng01-146J23.b_40_257

seq1  GAATTCAGTGGTCAGCTGACCCAACAGAGACTTTTCCTTGATTGGAGTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTGGTCAGCTGACCCAACAGAGACTTTTCCTTGATTGGAGTTC  50

seq1  ATGGCCTAATAAGGAGGAGAGCTGTTAAGCAGATTAGTGCAAATGAGATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCCTAATAAGGAGGAGAGCTGTTAAGCAGATTAGTGCAAATGAGATT  100

seq1  AATCTACTGCAAAAGTGCATAGGAATGCTGAAGCCATGCTCTAGCTTCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTACTGCAAAAGTGCATAGGAATGCTGAAGCCATGCTCTAGCTTCAT  150

seq1  CATCTACTGGATAGCTCTCTGGAGCAGAGAACTCAGGGCCTGGGGTGTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTACTGGATAGCTCTCTGGAGCAGAGAACTCAGGGCCTGGGGTGTTA  200

seq1  GAGGGGGAGGGTGGAAGG  218
      ||||||||||||||||||
seq2  GAGGGGGAGGGTGGAAGG  218

seq1: chr4_104377822_104378885
seq2: B6Ng01-146J23.g_67_1135 (reverse)

seq1  TTTATCT-AGATAG-TTTTCGTGAGACAATGTCTCAGTTTGT-AGTTCAG  47
      ||||||| |||||| |||||||||||||||   ||||||||| |||||||
seq2  TTTATCTAAGATAGTTTTTCGTGAGACAATTCTTCAGTTTGTAAGTTCAG  50

seq1  CTGACATTACGTTTGTAACCCTCTTGAATGCTAGCT-AGGGTCATAGGCA  96
      || ||||||||||||||||| || |||||||||||| |||||||||||||
seq2  CT-ACATTACGTTTGTAACCTTC-TGAATGCTAGCTAAGGGTCATAGGCA  98

seq1  CGTGCCATGATGCCCATCTCTGCCCTTTCTAAG-TTGGTCTTTCTCAAAC  145
      |||||||||||| |||||||||| ||||||||| ||||||||||||||||
seq2  CGTGCCATGATG-CCATCTCTGCACTTTCTAAGTTTGGTCTTTCTCAAAC  147

seq1  TCTAGTTACCATAACAGCAGGAAC-TAACTC-ATACATACCTGTTTACCT  193
      |||||||||||||||||||||||| |||||| ||||||||||||||||||
seq2  TCTAGTTACCATAACAGCAGGAACTTAACTCAATACATACCTGTTTACCT  197

seq1  GCAGATTTGGGTTCTAGACATGTGTTGGCAACTGTGTAGAAACCAGAAGA  243
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GCAGATTTGGGTCCTAGACATGTGTTGGCAACTGTGTAGAAACCAGAAGA  247

seq1  TGAGCAAAAACCAAGCTTGGGAAATGAGCTGGATGGCTTTATGTCAACTT  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCAAAAACCAAGCTTGGGAAATGAGCTGGATGGCTTTATGTCAACTT  297

seq1  AACACAAGCTAAAATCATCTGAGA-GGAGAGTGCCCCAGTTAAGAAAATG  342
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  AACACAAGCTAAAATCATCTGAGAGGGAGAGTGCCCCAGTTAAGAAAATG  347

seq1  CTTCCATGAGATTGGGTTGTAGGCAGGCCTGTAAGGCATTTTCTTAATTA  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCATGAGATTGGGTTGTAGGCAGGCCTGTAAGGCATTTTCTTAATTA  397

seq1  GTGATTGATGTGGGAGGGCACAGCCCCTTGGGGGTGGTGCCATCTGTAGA  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATTGATGTGGGAGGGCACAGCCCCTTGGGGGTGGTGCCATCTGTAGA  447

seq1  CTAGTGGTCCTGGGTTCTATAAGAAAGTAGGCTGATCAAGCCACAAGGAG  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTGGTCCTGGGTTCTATAAGAAAGTAGGCTGATCAAGCCACAAGGAG  497

seq1  CAAGCCAGTAAGCAGCAGCTCTCCATGGCCTCTGCATCATCTCCTGCCTT  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCCAGTAAGCAGCAGCTCTCCATGGCCTCTGCATCATCTCCTGCCTT  547

seq1  CCTACCCTGTATGAGTTCCTGTGCTGATTTGTCCCCAGCTTGCTTTTGGT  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACCCTGTATGAGTTCCTGTGCTGATTTGTCCCCAGCTTGCTTTTGGT  597

seq1  TGTGGTGTTTCAACACAGCGGTGGTTAACACCATTGCTAAGACAGGAAGG  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTGTTTCAACACAGCGGTGGTTAACACCATTGCTAAGACAGGAAGG  647

seq1  TGATATTCAACATGACCTCAGGAGATGAGCATCCCCCTAATGTTGCCACA  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATTCAACATGACCTCAGGAGATGAGCATCCCCCTAATGTTGCCACA  697

seq1  GAGAAGTCAGAGGATAAATGGACAGATTCTGTTCTGAGAATGACAGAAAG  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGTCAGAGGATAAATGGACAGATTCTGTTCTGAGAATGACAGAAAG  747

seq1  CTTTCTTTGGCTATCCCCAGTGGCTGGTGCTGGCTTCTGTTCTATGAATG  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTTGGCTATCCCCAGTGGCTGGTGCTGGCTTCTGTTCTATGAATG  797

seq1  GCATCATGACTGGAAATGGCACATTCTCTGTAAAAATGCTCAATATGGTT  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCATGACTGGAAATGGCACATTCTCTGTAAAAATGCTCAATATGGTT  847

seq1  CCCTTGTTGTGACACTCCCCTTACAGTGGCTGGAGTTAGTCATCTCCAGT  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTGTTGTGACACTCCCCTTACAGTGGCTGGAGTTAGTCATCTCCAGT  897

seq1  TTTCTCTAACCTCACTTGCTCTAGCTCAGGGGCTTGGCGGGGGGAGGGGA  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTAACCTCACTTGCTCTAGCTCAGGGGCTTGGCGGGGGGAGGGGA  947

seq1  GGGCAGTTCAAGGGCCTCTTGGTGCCAGGCTAGTAGTAGACACCCAGGGC  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAGTTCAAGGGCCTCTTGGTGCCAGGCTAGTAGTAGACACCCAGGGC  997

seq1  ATTTTGGAGGTCGCCAGATTCATACTGTGAAAAGCAAATCTAAGAGGGAA  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGGAGGTCGCCAGATTCATACTGTGAAAAGCAAATCTAAGAGGGAA  1047

seq1  GACCAAGTAGTGAAATGAATTC  1064
      ||||||||||||||||||||||
seq2  GACCAAGTAGTGAAATGAATTC  1069