BAC Information

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BAC

Clone NameB6Ng01-146K24
Chromosome4 (Build37)
Map Location 145,120,738 - 145,121,885
singlet/doubletsinglet
Overlap geneLOC622846
Upstream geneLOC666194, LOC627085, LOC666215, LOC435815, Gm436, LOC546849, Gm438, LOC666242, LOC676844, Dhrs3, Vps13d, Tnfrsf1b, Tnfrsf8, LOC666282, 9230115A19Rik, LOC195576
Downstream geneLOC666314, LOC545701, OTTMUSG00000010965, LOC666334, LOC545703, LOC384081, LOC100041379, LOC666349, LOC666351, LOC545704, 1700029I01Rik, LOC236069, LOC384084, LOC666386, LOC666390, LOC100041433, LOC433790, LOC433791, Rex2, LOC100043012, LOC100041461, LOC630093, OTTMUSG00000010105, LOC666445, MGC117846
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-146K24.bB6Ng01-146K24.g
ACCDH943761DH943762
length1,1331,171
definitionDH943761|Mus musculus domesticus DNA, BAC clone: B6Ng01-146K24, 5' end.DH943762|Mus musculus domesticus DNA, BAC clone: B6Ng01-146K24, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaactttgttcttcactggaccctggaagaaggaccacaacaag
aatgagtgtgtatctggtaaatacaccacaggtcagtgtcctttcctttc
cacatttctttttttaaaaaatctctttttattcaagtcatccaaaagtt
ttaatctctatatgttgaatgttatctaaagggatatttttctatgctct
atattttctcttgtaataatgagaatttaatgtttttccctttcatgcat
ataatggctttatatttttaacttgacttttatattgtgaggatatataa
ttcccttggaatagagacctgcatgtctcaaataggatctgttacaatga
tgctcagagaacagattgatggatattttctatgttgaataagttctgtc
cttttgtattagtgtgaggtgaggtctcttgtgccacataaattgcattt
cagggatggtcaggtttctaaacacaagcttgtgaatgagggtatagaaa
taagtataaattcacatcactaaagaacatatgaaagagtagaatttcta
gaagggaaaattataagagatccactgtcttgcatcctaatagtaaatgt
attattagctccctagggtcacagataatggaaggaaaatgtcttttacc
attagtgtgattgtgaggtgatacagatttcaatattctgacaacacttt
tttcacacctcatgtcacacagtaatcacagttgacacctgaaatctatt
tgtctcaagagagatactatccttgtagaaaattcacaatattgaaatag
ttatttacctctctttttggtttcagaaatacttttaagtcctgtttgct
tcacctttgtatttcatcacatgaactatattagtaaaattttctagaga
ggatagctatggtgctgtgcataaaccatcaattttcaaaataaataatt
ttctttattattttttgtctctttttctttagaagggacaggctgaaaca
gtctatgctaatcctcttcagtcaagctgtgcattacacagttgaaactg
aaggttgggcatgttcaattttcatacgaatactatttctttaggtcata
gggttatctgaggttttacgtacactggaatga
gaattctctgatgactattaagatgggatttgtgggtaaagcatttgtca
cattcactacatttgtaaggtttctctcctgtatgaattctctgatgaat
attaagatcggatttttgggtaaagcatttgtcacattcactgcatttgt
aagggttctctcctgtatgaattctctgatgaatactaagatggaatttt
cgggtaaagcatttgtcacattcactacatttgtaaggtttctctcctgt
atgaattctctgatgaatactaagatggaattttcgggtaaagcatttgt
cacattcactacatttgtaaggtttctctcctgtatgaattctctgatga
ctattaagatgggatttgtgggtaaagcatttgtcacattcactacattt
gtaaggtttctctcctgtatgaattctctgatgaatattaagatcggatt
tttgggtaaagcatttgtcacattcactgcatttgtaagggttctctcct
gtatgaattctctgatgaatactaagatggaattttcgggtaaagcattt
gtcacattcactacatttgtaaggtttctctcctgtatgaattctctgat
gaatattaagatgggatttgtgggtaaagcatttgtcacattcactacat
ttgtaaggtttctctcctgtatgaattctctgatgaatattaagatcgga
ttttgggtaaagcatttgtcacattcactgcatttgtaagggttctctcc
tgtatgaattctctgatgaatactaagatggaattttcgggtaaagcatt
tgtcacattcactacatttgtaaggtttctctcctgtatgaattttctga
tgactattaagatgggatttgtgggtaaagcatttgtcacattcactact
ttgtaagtttctctccttgtatgaattctctgatgaatataagaatcgga
tttttggtaaagcattggtcacatccactgcatttgaaaggtttcctctt
ctggtatgaattcctgagaaatctaagactgcctgttttataaagcattt
gtcaacatctactgacgtttgaaggttcctctctggtaggaaatctctga
agacataataaagaatgtattgtcgggtttaaccaattggcctaccttcc
aacacttgcataggtatcctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_145120738_145121885
seq2: B6Ng01-146K24.b_45_1177

seq1  GAATTCAAACTTTGTTCTTCACTGGACCCTGGAAGAAGGACCACAACAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAACTTTGTTCTTCACTGGACCCTGGAAGAAGGACCACAACAAG  50

seq1  AATGAGTGTGTATCTGGTAAATACACCACAGGTCAGTGTCCTTTCCTTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGTGTGTATCTGGTAAATACACCACAGGTCAGTGTCCTTTCCTTTC  100

seq1  CACATTTCTTTTTTTAAAAAATCTCTTTTTATTCAAGTCATCCAAAAGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTTCTTTTTTTAAAAAATCTCTTTTTATTCAAGTCATCCAAAAGTT  150

seq1  TTAATCTCTATATGTTGAATGTTATCTAAAGGGATATTTTTCTATGCTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATCTCTATATGTTGAATGTTATCTAAAGGGATATTTTTCTATGCTCT  200

seq1  ATATTTTCTCTTGTAATAATGAGAATTTAATGTTTTTCCCTTTCATGCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTCTCTTGTAATAATGAGAATTTAATGTTTTTCCCTTTCATGCAT  250

seq1  ATAATGGCTTTATATTTTTAACTTGACTTTTATATTGTGAGGATATATAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGGCTTTATATTTTTAACTTGACTTTTATATTGTGAGGATATATAA  300

seq1  TTCCCTTGGAATAGAGACCTGCATGTCTCAAATAGGATCTGTTACAATGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTTGGAATAGAGACCTGCATGTCTCAAATAGGATCTGTTACAATGA  350

seq1  TGCTCAGAGAACAGATTGATGGATATTTTCTATGTTGAATAAGTTCTGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCAGAGAACAGATTGATGGATATTTTCTATGTTGAATAAGTTCTGTC  400

seq1  CTTTTGTATTAGTGTGAGGTGAGGTCTCTTGTGCCACATAAATTGCATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGTATTAGTGTGAGGTGAGGTCTCTTGTGCCACATAAATTGCATTT  450

seq1  CAGGGATGGTCAGGTTTCTAAACACAAGCTTGTGAATGAGGGTATAGAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGATGGTCAGGTTTCTAAACACAAGCTTGTGAATGAGGGTATAGAAA  500

seq1  TAAGTATAAATTCACATCACTAAAGAACATATGAAAGAGTAGAATTTCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTATAAATTCACATCACTAAAGAACATATGAAAGAGTAGAATTTCTA  550

seq1  GAAGGGAAAATTATAAGAGATCCACTGTCTTGCATCCTAATAGTAAATGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGAAAATTATAAGAGATCCACTGTCTTGCATCCTAATAGTAAATGT  600

seq1  ATTATTAGCTCCCTAGGGTCACAGATAATGGAAGGAAAATGTCTTTTACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTAGCTCCCTAGGGTCACAGATAATGGAAGGAAAATGTCTTTTACC  650

seq1  ATTAGTGTGATTGTGAGGTGATACAGATTTCAATATTCTGACAACACTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGTGTGATTGTGAGGTGATACAGATTTCAATATTCTGACAACACTTT  700

seq1  TTTCACACCTCATGTCACACAGTAATCACAGTTGACACCTGAAATCTATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACACCTCATGTCACACAGTAATCACAGTTGACACCTGAAATCTATT  750

seq1  TGTCTCAAGAGAGATACTATCCTTGTAGAAAATTCACAATATTGAAATAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCAAGAGAGATACTATCCTTGTAGAAAATTCACAATATTGAAATAG  800

seq1  TTATTTACCTCTCTTTTTGGTTTCAGAAATACTTTTAAGTCCTGTTTGCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTACCTCTCTTTTTGGTTTCAGAAATACTTTTAAGTCCTGTTTGCT  850

seq1  TCACCTTTGTATTTCATCACATGAACTATATTAGTAAAAATTTTCTAGAG  900
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TCACCTTTGTATTTCATCACATGAACTATATTAGT-AAAATTTTCTAGAG  899

seq1  AGGATAGCTATGGTGCTGTGCATAAACCATCAATTTTCAAAAATAAATAA  950
      |||||||||||||||||||||||||||||||||||||| ||||||||| |
seq2  AGGATAGCTATGGTGCTGTGCATAAACCATCAATTTTC-AAAATAAAT-A  947

seq1  ATTTTCTTTATTATTTTTTGTCTCTTTTTCTTTAGAAGGGACAGGCTTGA  1000
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  ATTTTCTTTATTATTTTTTGTCTCTTTTTCTTTAGAAGGGACAGGC-TGA  996

seq1  AACAGTCTATGCTAATCCTCTTCAGCCAAGCTGTGCATTACACAGTGAAA  1050
      ||||||||||||||||||||||||| ||||||||||||||||||||  ||
seq2  AACAGTCTATGCTAATCCTCTTCAGTCAAGCTGTGCATTACACAGTTGAA  1046

seq1  ACTGAAGGGTTGTGGCAATGTTTCAATTTTTTCATTACG-ATACTATTTT  1099
      |||||| ||||| ||| ||| |||||  |||||| |||| |||||| |||
seq2  ACTGAA-GGTTG-GGC-ATG-TTCAA--TTTTCA-TACGAATACTA-TTT  1088

seq1  CTTTAAGTCCATAAGTGTTTATCTGAAGGTTTTTACGTACACT-GAATGA  1148
      ||||| || ||||   | ||||||||  | ||||||||||||| ||||||
seq2  CTTTAGGT-CATA--GGGTTATCTGA--GGTTTTACGTACACTGGAATGA  1133